RNA–Protein interactions for RNA: ENST00000390687.8

SNRPN-202, Transcript of small nuclear ribonucleoprotein polypeptide N, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPN, Length 1,528 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPN-202ENST00000390687 GLT8D2Q9H1C3 349 aa17.06■□□□□ 0.32
SNRPN-202ENST00000390687 PDRG1Q9NUG6 133 aa17.06■□□□□ 0.32
SNRPN-202ENST00000390687 GTF2IRD1Q9UHL9 959 aa17.06■□□□□ 0.32
SNRPN-202ENST00000390687 NOD1Q9Y239 953 aa17.06■□□□□ 0.32
SNRPN-202ENST00000390687 EYSQ5T1H1 3165 aa17.05■□□□□ 0.32
SNRPN-202ENST00000390687 NOP56O00567 594 aaKnown RBP17.05■□□□□ 0.32
SNRPN-202ENST00000390687 MTMR1Q13613 665 aa17.05■□□□□ 0.32
SNRPN-202ENST00000390687 RASIP1Q5U651 963 aa17.05■□□□□ 0.32
SNRPN-202ENST00000390687 CDHR1Q96JP9 859 aa17.05■□□□□ 0.32
SNRPN-202ENST00000390687 SLC26A6Q9BXS9 759 aa17.05■□□□□ 0.32
SNRPN-202ENST00000390687 RNF26Q9BY78 433 aaPredicted RBP17.05■□□□□ 0.32
SNRPN-202ENST00000390687 ZMYND12Q9H0C1 365 aa17.05■□□□□ 0.32
SNRPN-202ENST00000390687 EHMT1Q9H9B1 1298 aa17.05■□□□□ 0.32
SNRPN-202ENST00000390687 DOCK5Q9H7D0 1870 aa17.04■□□□□ 0.32
SNRPN-202ENST00000390687 H3BRB1 525 aa17.04■□□□□ 0.32
SNRPN-202ENST00000390687 PITPNM1O00562 1244 aa17.04■□□□□ 0.32
SNRPN-202ENST00000390687 MAFGO15525 162 aa17.04■□□□□ 0.32
SNRPN-202ENST00000390687 SEC24BO95487 1268 aa17.04■□□□□ 0.32
SNRPN-202ENST00000390687 FGBP02675 491 aa17.04■□□□□ 0.32
SNRPN-202ENST00000390687 LGALS2P05162 132 aa17.04■□□□□ 0.32
SNRPN-202ENST00000390687 ANAPC15P60006 121 aa17.04■□□□□ 0.32
SNRPN-202ENST00000390687 SMAD3P84022 425 aaKnown RBP17.04■□□□□ 0.32
SNRPN-202ENST00000390687 ZNF200P98182 395 aaPredicted RBP17.04■□□□□ 0.32
SNRPN-202ENST00000390687 AKAP17AQ02040 695 aaKnown RBP17.04■□□□□ 0.32
SNRPN-202ENST00000390687 HIC1Q14526 733 aa17.04■□□□□ 0.32
SNRPN-202ENST00000390687 PSRC1Q6PGN9 363 aaPredicted RBP17.04■□□□□ 0.32
SNRPN-202ENST00000390687 RPUSD2Q8IZ73 545 aaKnown RBP17.04■□□□□ 0.32
SNRPN-202ENST00000390687 GIMAP8Q8ND71 665 aaPredicted RBP17.04■□□□□ 0.32
SNRPN-202ENST00000390687 MXRA8Q9BRK3 442 aa17.04■□□□□ 0.32
SNRPN-202ENST00000390687 ANO3Q9BYT9 981 aa17.04■□□□□ 0.32
SNRPN-202ENST00000390687 TUT1Q9H6E5 874 aaKnown RBP17.04■□□□□ 0.32
SNRPN-202ENST00000390687 ESYT2A0FGR8 921 aa17.03■□□□□ 0.32
SNRPN-202ENST00000390687 IQCF3P0C7M6 154 aa17.03■□□□□ 0.32
SNRPN-202ENST00000390687 SP4Q02446 784 aa17.03■□□□□ 0.32
SNRPN-202ENST00000390687 AP3B2Q13367 1082 aa17.03■□□□□ 0.32
SNRPN-202ENST00000390687 JAKMIP3Q5VZ66 844 aa17.03■□□□□ 0.32
SNRPN-202ENST00000390687 FAM109BQ6ICB4 259 aaPredicted RBP17.03■□□□□ 0.32
SNRPN-202ENST00000390687 RETREG2Q8NC44 543 aa17.03■□□□□ 0.32
SNRPN-202ENST00000390687 HERVK_113Q902F9 699 aa17.03■□□□□ 0.32
SNRPN-202ENST00000390687 DHX38Q92620 1227 aaKnown RBP17.03■□□□□ 0.32
SNRPN-202ENST00000390687 KCNH7Q9NS40 1196 aa17.03■□□□□ 0.32
SNRPN-202ENST00000390687 MTMR10Q9NXD2 777 aa17.03■□□□□ 0.32
SNRPN-202ENST00000390687 PKD2L1Q9P0L9 805 aa17.03■□□□□ 0.32
SNRPN-202ENST00000390687 TRIP12Q14669 1992 aaPredicted RBP17.03■□□□□ 0.32
SNRPN-202ENST00000390687 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.02■□□□□ 0.32
SNRPN-202ENST00000390687 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.02■□□□□ 0.32
SNRPN-202ENST00000390687 SREBF1P36956 1147 aa17.02■□□□□ 0.32
SNRPN-202ENST00000390687 STK3Q13188 491 aa17.02■□□□□ 0.32
SNRPN-202ENST00000390687 BFSP2Q13515 415 aa17.02■□□□□ 0.32
SNRPN-202ENST00000390687 OTOP2Q7RTS6 562 aa17.02■□□□□ 0.32
SNRPN-202ENST00000390687 C6orf50Q9HD87 102 aa17.02■□□□□ 0.32
SNRPN-202ENST00000390687 CXXC1Q9P0U4 656 aaPredicted RBP17.02■□□□□ 0.32
SNRPN-202ENST00000390687 A0A0C4DFX4 3053 aa17.02■□□□□ 0.31
SNRPN-202ENST00000390687 MEIS1O00470 390 aa17.01■□□□□ 0.31
SNRPN-202ENST00000390687 ARP10275 920 aa17.01■□□□□ 0.31
SNRPN-202ENST00000390687 CEP55Q53EZ4 464 aa17.01■□□□□ 0.31
SNRPN-202ENST00000390687 UTP14CQ5TAP6 766 aaKnown RBP17.01■□□□□ 0.31
SNRPN-202ENST00000390687 DEFB128Q7Z7B8 93 aa17.01■□□□□ 0.31
SNRPN-202ENST00000390687 CAGE1Q8TC20 777 aa17.01■□□□□ 0.31
SNRPN-202ENST00000390687 CCDC12Q8WUD4 166 aaPredicted RBP17.01■□□□□ 0.31
SNRPN-202ENST00000390687 CRYGNQ8WXF5 182 aa17.01■□□□□ 0.31
SNRPN-202ENST00000390687 IL17RAQ96F46 866 aa17.01■□□□□ 0.31
SNRPN-202ENST00000390687 VPS54Q9P1Q0 977 aa17.01■□□□□ 0.31
SNRPN-202ENST00000390687 CHD9Q3L8U1 2897 aa17.01■□□□□ 0.31
SNRPN-202ENST00000390687 GSTTP1A0A1W2PQM5 241 aa17.01■□□□□ 0.31
SNRPN-202ENST00000390687 GNA11P29992 359 aa17.01■□□□□ 0.31
SNRPN-202ENST00000390687 ARHGAP4P98171 946 aa17.01■□□□□ 0.31
SNRPN-202ENST00000390687 SSRP1Q08945 709 aaKnown RBP17.01■□□□□ 0.31
SNRPN-202ENST00000390687 PTK7Q13308 1070 aa17.01■□□□□ 0.31
SNRPN-202ENST00000390687 TRIM50Q86XT4 487 aa17.01■□□□□ 0.31
SNRPN-202ENST00000390687 SEPT1Q8WYJ6 367 aa17.01■□□□□ 0.31
SNRPN-202ENST00000390687 WNT8BQ93098 351 aa17.01■□□□□ 0.31
SNRPN-202ENST00000390687 RNPEPQ9H4A4 650 aa17.01■□□□□ 0.31
SNRPN-202ENST00000390687 SCN5AQ14524 2016 aa17■□□□□ 0.31
SNRPN-202ENST00000390687 GRXCR1A8MXD5 290 aa17■□□□□ 0.31
SNRPN-202ENST00000390687 CPLX1O14810 134 aa17■□□□□ 0.31
SNRPN-202ENST00000390687 SMIM10L2AP0DMW4 78 aa17■□□□□ 0.31
SNRPN-202ENST00000390687 SMIM10L2BP0DMW5 78 aa17■□□□□ 0.31
SNRPN-202ENST00000390687 CKBP12277 381 aa17■□□□□ 0.31
SNRPN-202ENST00000390687 HOXC8P31273 242 aa17■□□□□ 0.31
SNRPN-202ENST00000390687 RFC2P35250 354 aa17■□□□□ 0.31
SNRPN-202ENST00000390687 TCF7P36402 384 aaPredicted RBP17■□□□□ 0.31
SNRPN-202ENST00000390687 RBL2Q08999 1139 aa17■□□□□ 0.31
SNRPN-202ENST00000390687 GPNMBQ14956 572 aa17■□□□□ 0.31
SNRPN-202ENST00000390687 TRIM22Q8IYM9 498 aa17■□□□□ 0.31
SNRPN-202ENST00000390687 REXO1Q8N1G1 1221 aaKnown RBP17■□□□□ 0.31
SNRPN-202ENST00000390687 AFAP1L1Q8TED9 768 aa17■□□□□ 0.31
SNRPN-202ENST00000390687 FAM161BQ96MY7 647 aa17■□□□□ 0.31
SNRPN-202ENST00000390687 SEMA6BQ9H3T3 888 aa17■□□□□ 0.31
SNRPN-202ENST00000390687 TPCN1Q9ULQ1 816 aa17■□□□□ 0.31
SNRPN-202ENST00000390687 C17orf102A2RUQ5 167 aa16.99■□□□□ 0.31
SNRPN-202ENST00000390687 FAM86B1E9PN63 330 aa16.99■□□□□ 0.31
SNRPN-202ENST00000390687 EIF5BO60841 1220 aaKnown RBP16.99■□□□□ 0.31
SNRPN-202ENST00000390687 PFKMP08237 780 aa16.99■□□□□ 0.31
SNRPN-202ENST00000390687 CYP3A4P08684 503 aa16.99■□□□□ 0.31
SNRPN-202ENST00000390687 FAM86B2P0C5J1 330 aa16.99■□□□□ 0.31
SNRPN-202ENST00000390687 ZNF76P36508 570 aa16.99■□□□□ 0.31
SNRPN-202ENST00000390687 SCRN1Q12765 414 aa16.99■□□□□ 0.31
SNRPN-202ENST00000390687 TRIM71Q2Q1W2 868 aaKnown RBP16.99■□□□□ 0.31
SNRPN-202ENST00000390687 MCTP2Q6DN12 878 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms