RNA–Protein interactions for RNA: ENST00000390624.3

IGHV3-48-201, Transcript of immunoglobulin heavy variable 3-48, humanhuman

APPRIS P1 BASIC

Gene IGHV3-48, Length 432 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-48-201ENST00000390624 PTGISQ16647 500 aa16.19■□□□□ 0.18
IGHV3-48-201ENST00000390624 BICD2Q8TD16 824 aa16.19■□□□□ 0.18
IGHV3-48-201ENST00000390624 PGBD1Q96JS3 809 aa16.19■□□□□ 0.18
IGHV3-48-201ENST00000390624 MXRA8Q9BRK3 442 aa16.19■□□□□ 0.18
IGHV3-48-201ENST00000390624 C16orf70Q9BSU1 422 aa16.19■□□□□ 0.18
IGHV3-48-201ENST00000390624 ALG1Q9BT22 464 aa16.19■□□□□ 0.18
IGHV3-48-201ENST00000390624 TMEM260Q9NX78 707 aa16.19■□□□□ 0.18
IGHV3-48-201ENST00000390624 GTF2IRD1Q9UHL9 959 aa16.19■□□□□ 0.18
IGHV3-48-201ENST00000390624 UMODL1Q5DID0 1318 aa16.19■□□□□ 0.18
IGHV3-48-201ENST00000390624 DOCK5Q9H7D0 1870 aa16.18■□□□□ 0.18
IGHV3-48-201ENST00000390624 H3BRB1 525 aa16.18■□□□□ 0.18
IGHV3-48-201ENST00000390624 ATP9AO75110 1047 aa16.18■□□□□ 0.18
IGHV3-48-201ENST00000390624 KCNA2P16389 499 aa16.18■□□□□ 0.18
IGHV3-48-201ENST00000390624 SREBF1P36956 1147 aa16.18■□□□□ 0.18
IGHV3-48-201ENST00000390624 CCL23P55773 120 aa16.18■□□□□ 0.18
IGHV3-48-201ENST00000390624 JAKMIP3Q5VZ66 844 aa16.18■□□□□ 0.18
IGHV3-48-201ENST00000390624 GDF6Q6KF10 455 aaPredicted RBP16.18■□□□□ 0.18
IGHV3-48-201ENST00000390624 REXO1Q8N1G1 1221 aaKnown RBP16.18■□□□□ 0.18
IGHV3-48-201ENST00000390624 CCDC148Q8NFR7 591 aa16.18■□□□□ 0.18
IGHV3-48-201ENST00000390624 GPR20Q99678 358 aa16.18■□□□□ 0.18
IGHV3-48-201ENST00000390624 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.18■□□□□ 0.18
IGHV3-48-201ENST00000390624 SLKQ9H2G2 1235 aaPredicted RBP16.18■□□□□ 0.18
IGHV3-48-201ENST00000390624 TUT1Q9H6E5 874 aaKnown RBP16.18■□□□□ 0.18
IGHV3-48-201ENST00000390624 IL23AQ9NPF7 189 aa16.18■□□□□ 0.18
IGHV3-48-201ENST00000390624 SH3GLB2Q9NR46 395 aa16.18■□□□□ 0.18
IGHV3-48-201ENST00000390624 HDAC6Q9UBN7 1215 aa16.18■□□□□ 0.18
IGHV3-48-201ENST00000390624 PITPNM1O00562 1244 aa16.17■□□□□ 0.18
IGHV3-48-201ENST00000390624 LGALS2P05162 132 aa16.17■□□□□ 0.18
IGHV3-48-201ENST00000390624 ZNF76P36508 570 aa16.17■□□□□ 0.18
IGHV3-48-201ENST00000390624 ARHGAP4P98171 946 aa16.17■□□□□ 0.18
IGHV3-48-201ENST00000390624 BFSP2Q13515 415 aa16.17■□□□□ 0.18
IGHV3-48-201ENST00000390624 CEP55Q53EZ4 464 aa16.17■□□□□ 0.18
IGHV3-48-201ENST00000390624 TMEM240Q5SV17 173 aa16.17■□□□□ 0.18
IGHV3-48-201ENST00000390624 C16orf59Q7L2K0 433 aa16.17■□□□□ 0.18
IGHV3-48-201ENST00000390624 RPUSD2Q8IZ73 545 aaKnown RBP16.17■□□□□ 0.18
IGHV3-48-201ENST00000390624 RETREG2Q8NC44 543 aa16.17■□□□□ 0.18
IGHV3-48-201ENST00000390624 CYP2W1Q8TAV3 490 aa16.17■□□□□ 0.18
IGHV3-48-201ENST00000390624 RNPC3Q96LT9 517 aaKnown RBP16.17■□□□□ 0.18
IGHV3-48-201ENST00000390624 WNT8AQ9H1J5 351 aa16.17■□□□□ 0.18
IGHV3-48-201ENST00000390624 KCNH7Q9NS40 1196 aa16.17■□□□□ 0.18
IGHV3-48-201ENST00000390624 TPCN1Q9ULQ1 816 aa16.17■□□□□ 0.18
IGHV3-48-201ENST00000390624 MEIS1O00470 390 aa16.16■□□□□ 0.18
IGHV3-48-201ENST00000390624 PFKFB2O60825 505 aa16.16■□□□□ 0.18
IGHV3-48-201ENST00000390624 CDKL5O76039 1030 aa16.16■□□□□ 0.18
IGHV3-48-201ENST00000390624 DEXIO95424 95 aa16.16■□□□□ 0.18
IGHV3-48-201ENST00000390624 ACRP10323 421 aa16.16■□□□□ 0.18
IGHV3-48-201ENST00000390624 NEK4P51957 841 aa16.16■□□□□ 0.18
IGHV3-48-201ENST00000390624 AK2P54819 239 aa16.16■□□□□ 0.18
IGHV3-48-201ENST00000390624 SP4Q02446 784 aa16.16■□□□□ 0.18
IGHV3-48-201ENST00000390624 SCRN1Q12765 414 aa16.16■□□□□ 0.18
IGHV3-48-201ENST00000390624 PSRC1Q6PGN9 363 aaPredicted RBP16.16■□□□□ 0.18
IGHV3-48-201ENST00000390624 ZNF365Q70YC5 407 aa16.16■□□□□ 0.18
IGHV3-48-201ENST00000390624 NIPA1Q7RTP0 329 aa16.16■□□□□ 0.18
IGHV3-48-201ENST00000390624 CCDC155Q8N6L0 562 aa16.16■□□□□ 0.18
IGHV3-48-201ENST00000390624 SEPT1Q8WYJ6 367 aa16.16■□□□□ 0.18
IGHV3-48-201ENST00000390624 VPS54Q9P1Q0 977 aa16.16■□□□□ 0.18
IGHV3-48-201ENST00000390624 FGBP02675 491 aa16.15■□□□□ 0.18
IGHV3-48-201ENST00000390624 CYP3A4P08684 503 aa16.15■□□□□ 0.18
IGHV3-48-201ENST00000390624 ARP10275 920 aa16.15■□□□□ 0.18
IGHV3-48-201ENST00000390624 NLRP5P59047 1200 aa16.15■□□□□ 0.18
IGHV3-48-201ENST00000390624 FAM177A1Q8N128 213 aaPredicted RBP16.15■□□□□ 0.18
IGHV3-48-201ENST00000390624 CAGE1Q8TC20 777 aa16.15■□□□□ 0.18
IGHV3-48-201ENST00000390624 CRYGNQ8WXF5 182 aa16.15■□□□□ 0.18
IGHV3-48-201ENST00000390624 SCLYQ96I15 445 aa16.15■□□□□ 0.18
IGHV3-48-201ENST00000390624 PKD2L1Q9P0L9 805 aa16.15■□□□□ 0.18
IGHV3-48-201ENST00000390624 ZNF215Q9UL58 517 aaPredicted RBP16.15■□□□□ 0.18
IGHV3-48-201ENST00000390624 TELO2Q9Y4R8 837 aa16.15■□□□□ 0.18
IGHV3-48-201ENST00000390624 NFASCO94856 1347 aa16.15■□□□□ 0.18
IGHV3-48-201ENST00000390624 GSTTP1A0A1W2PQM5 241 aa16.14■□□□□ 0.17
IGHV3-48-201ENST00000390624 ADAMTS3O15072 1205 aa16.14■□□□□ 0.17
IGHV3-48-201ENST00000390624 IQCF3P0C7M6 154 aa16.14■□□□□ 0.17
IGHV3-48-201ENST00000390624 TCF7P36402 384 aaPredicted RBP16.14■□□□□ 0.17
IGHV3-48-201ENST00000390624 SMAD3P84022 425 aaKnown RBP16.14■□□□□ 0.17
IGHV3-48-201ENST00000390624 PTK7Q13308 1070 aa16.14■□□□□ 0.17
IGHV3-48-201ENST00000390624 C8orf34Q49A92 452 aa16.14■□□□□ 0.17
IGHV3-48-201ENST00000390624 UTP14CQ5TAP6 766 aaKnown RBP16.14■□□□□ 0.17
IGHV3-48-201ENST00000390624 CTAGE1Q96RT6 745 aa16.14■□□□□ 0.17
IGHV3-48-201ENST00000390624 SDF4Q9BRK5 362 aa16.14■□□□□ 0.17
IGHV3-48-201ENST00000390624 AGO4Q9HCK5 861 aaKnown RBP16.14■□□□□ 0.17
IGHV3-48-201ENST00000390624 SLC9A2Q9UBY0 812 aa16.14■□□□□ 0.17
IGHV3-48-201ENST00000390624 TRIP12Q14669 1992 aaPredicted RBP16.14■□□□□ 0.17
IGHV3-48-201ENST00000390624 C17orf102A2RUQ5 167 aa16.13■□□□□ 0.17
IGHV3-48-201ENST00000390624 PFKMP08237 780 aa16.13■□□□□ 0.17
IGHV3-48-201ENST00000390624 SMIM10L2AP0DMW4 78 aa16.13■□□□□ 0.17
IGHV3-48-201ENST00000390624 SMIM10L2BP0DMW5 78 aa16.13■□□□□ 0.17
IGHV3-48-201ENST00000390624 GNAT1P11488 350 aa16.13■□□□□ 0.17
IGHV3-48-201ENST00000390624 RFC2P35250 354 aa16.13■□□□□ 0.17
IGHV3-48-201ENST00000390624 ZNF200P98182 395 aaPredicted RBP16.13■□□□□ 0.17
IGHV3-48-201ENST00000390624 GALNT17Q6IS24 598 aa16.13■□□□□ 0.17
IGHV3-48-201ENST00000390624 PLA2G4DQ86XP0 818 aa16.13■□□□□ 0.17
IGHV3-48-201ENST00000390624 RASGRP4Q8TDF6 673 aa16.13■□□□□ 0.17
IGHV3-48-201ENST00000390624 AFAP1L1Q8TED9 768 aa16.13■□□□□ 0.17
IGHV3-48-201ENST00000390624 HERVK_113Q902F9 699 aa16.13■□□□□ 0.17
IGHV3-48-201ENST00000390624 MTIF3Q9H2K0 278 aaKnown RBP16.13■□□□□ 0.17
IGHV3-48-201ENST00000390624 RNPEPQ9H4A4 650 aa16.13■□□□□ 0.17
IGHV3-48-201ENST00000390624 JPH1Q9HDC5 661 aaPredicted RBP16.13■□□□□ 0.17
IGHV3-48-201ENST00000390624 PCDHA4Q9UN74 947 aa16.13■□□□□ 0.17
IGHV3-48-201ENST00000390624 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.12■□□□□ 0.17
IGHV3-48-201ENST00000390624 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.12■□□□□ 0.17
IGHV3-48-201ENST00000390624 FAM86B1E9PN63 330 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms