RNA–Protein interactions for RNA: ENST00000390466.1

TRAV39-201, Transcript of T cell receptor alpha variable 39, humanhuman

APPRIS P1 BASIC

Gene TRAV39, Length 331 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV39-201ENST00000390466 CCDC121Q6ZUS5 278 aa3.8□□□□□ -1.8
TRAV39-201ENST00000390466 ASRGL1Q7L266 308 aa3.8□□□□□ -1.8
TRAV39-201ENST00000390466 ARMC9Q7Z3E5 817 aa3.8□□□□□ -1.8
TRAV39-201ENST00000390466 SLFN11Q7Z7L1 901 aa3.8□□□□□ -1.8
TRAV39-201ENST00000390466 ADGRA1Q86SQ6 560 aa3.8□□□□□ -1.8
TRAV39-201ENST00000390466 FMNL3Q8IVF7 1028 aa3.8□□□□□ -1.8
TRAV39-201ENST00000390466 IFT20Q8IY31 132 aa3.8□□□□□ -1.8
TRAV39-201ENST00000390466 TRIM22Q8IYM9 498 aa3.8□□□□□ -1.8
TRAV39-201ENST00000390466 CACNA2D3Q8IZS8 1091 aa3.8□□□□□ -1.8
TRAV39-201ENST00000390466 SRBD1Q8N5C6 995 aaKnown RBP3.8□□□□□ -1.8
TRAV39-201ENST00000390466 RNF10Q8N5U6 811 aaKnown RBP3.8□□□□□ -1.8
TRAV39-201ENST00000390466 ARFGAP2Q8N6H7 521 aa3.8□□□□□ -1.8
TRAV39-201ENST00000390466 DAGLBQ8NCG7 672 aa3.8□□□□□ -1.8
TRAV39-201ENST00000390466 OR2W6PQ8NHA6 318 aa3.8□□□□□ -1.8
TRAV39-201ENST00000390466 ACTRT1Q8TDG2 376 aa3.8□□□□□ -1.8
TRAV39-201ENST00000390466 PARD3BQ8TEW8 1205 aa3.8□□□□□ -1.8
TRAV39-201ENST00000390466 ZNF384Q8TF68 577 aa3.8□□□□□ -1.8
TRAV39-201ENST00000390466 NSMCE1Q8WV22 266 aa3.8□□□□□ -1.8
TRAV39-201ENST00000390466 UPF1Q92900 1129 aaKnown RBP eCLIP3.8□□□□□ -1.8
TRAV39-201ENST00000390466 UTP4Q969X6 686 aaKnown RBP3.8□□□□□ -1.8
TRAV39-201ENST00000390466 RBM33Q96EV2 1170 aaKnown RBP3.8□□□□□ -1.8
TRAV39-201ENST00000390466 BORCS6Q96GS4 357 aa3.8□□□□□ -1.8
TRAV39-201ENST00000390466 DCAF5Q96JK2 942 aa3.8□□□□□ -1.8
TRAV39-201ENST00000390466 CALR3Q96L12 384 aaKnown RBP3.8□□□□□ -1.8
TRAV39-201ENST00000390466 CCDC114Q96M63 670 aa3.8□□□□□ -1.8
TRAV39-201ENST00000390466 PHF12Q96QT6 1004 aa3.8□□□□□ -1.8
TRAV39-201ENST00000390466 C7orf25Q9BPX7 421 aa3.8□□□□□ -1.8
TRAV39-201ENST00000390466 RIOK1Q9BRS2 568 aaKnown RBP3.8□□□□□ -1.8
TRAV39-201ENST00000390466 MMTAG2Q9BU76 263 aaKnown RBP3.8□□□□□ -1.8
TRAV39-201ENST00000390466 EDEM3Q9BZQ6 932 aa3.8□□□□□ -1.8
TRAV39-201ENST00000390466 TRIM9Q9C026 710 aa3.8□□□□□ -1.8
TRAV39-201ENST00000390466 KRT23Q9C075 422 aa3.8□□□□□ -1.8
TRAV39-201ENST00000390466 GANQ9H2C0 597 aa3.8□□□□□ -1.8
TRAV39-201ENST00000390466 ARMT1Q9H993 441 aa3.8□□□□□ -1.8
TRAV39-201ENST00000390466 EPB41L5Q9HCM4 733 aa3.8□□□□□ -1.8
TRAV39-201ENST00000390466 BATF3Q9NR55 127 aa3.8□□□□□ -1.8
TRAV39-201ENST00000390466 ZDHHC18Q9NUE0 388 aa3.8□□□□□ -1.8
TRAV39-201ENST00000390466 ABCF3Q9NUQ8 709 aa3.8□□□□□ -1.8
TRAV39-201ENST00000390466 BSDC1Q9NW68 430 aaPredicted RBP3.8□□□□□ -1.8
TRAV39-201ENST00000390466 RMND1Q9NWS8 449 aa3.8□□□□□ -1.8
TRAV39-201ENST00000390466 FBXL5Q9UKA1 691 aa3.8□□□□□ -1.8
TRAV39-201ENST00000390466 MAPK8IP1Q9UQF2 711 aa3.8□□□□□ -1.8
TRAV39-201ENST00000390466 TRPC6Q9Y210 931 aa3.8□□□□□ -1.8
TRAV39-201ENST00000390466 ASB3Q9Y575 518 aa3.8□□□□□ -1.8
TRAV39-201ENST00000390466 QSER1Q2KHR3 1735 aa3.8□□□□□ -1.8
TRAV39-201ENST00000390466 NRAPQ86VF7 1730 aa3.8□□□□□ -1.8
TRAV39-201ENST00000390466 C10orf71Q711Q0 1435 aa3.79□□□□□ -1.8
TRAV39-201ENST00000390466 ZNF804BA4D1E1 1349 aa3.79□□□□□ -1.8
TRAV39-201ENST00000390466 NCANO14594 1321 aa3.79□□□□□ -1.8
TRAV39-201ENST00000390466 TNKSO95271 1327 aa3.79□□□□□ -1.8
TRAV39-201ENST00000390466 SPATA31A1Q5TZJ5 1347 aa3.79□□□□□ -1.8
TRAV39-201ENST00000390466 A0A0G2JS52 829 aa3.79□□□□□ -1.8
TRAV39-201ENST00000390466 A0A1B0GUA9 196 aa3.79□□□□□ -1.8
TRAV39-201ENST00000390466 hCG_1642624A0A1W2PR95 340 aa3.79□□□□□ -1.8
TRAV39-201ENST00000390466 ERICH2A1L162 156 aa3.79□□□□□ -1.8
TRAV39-201ENST00000390466 CFAP73A6NFT4 308 aa3.79□□□□□ -1.8
TRAV39-201ENST00000390466 LRRC53A6NM62 1247 aa3.79□□□□□ -1.8
TRAV39-201ENST00000390466 A8MUI8 341 aa3.79□□□□□ -1.8
TRAV39-201ENST00000390466 PHF20L1A8MW92 1017 aa3.79□□□□□ -1.8
TRAV39-201ENST00000390466 H0YHG0 523 aa3.79□□□□□ -1.8
TRAV39-201ENST00000390466 PSMA7O14818 248 aa3.79□□□□□ -1.8
TRAV39-201ENST00000390466 ASAP2O43150 1006 aa3.79□□□□□ -1.8
TRAV39-201ENST00000390466 SART1O43290 800 aaKnown RBP3.79□□□□□ -1.8
TRAV39-201ENST00000390466 AHCYL1O43865 530 aa3.79□□□□□ -1.8
TRAV39-201ENST00000390466 PPP1R12BO60237 982 aaPredicted RBP3.79□□□□□ -1.8
TRAV39-201ENST00000390466 PEX11AO75192 247 aa3.79□□□□□ -1.8
TRAV39-201ENST00000390466 SKAP2O75563 359 aaPredicted RBP3.79□□□□□ -1.8
TRAV39-201ENST00000390466 NEBLO76041 1014 aa3.79□□□□□ -1.8
TRAV39-201ENST00000390466 UBOX5O94941 541 aa3.79□□□□□ -1.8
TRAV39-201ENST00000390466 TRIM37O94972 964 aa3.79□□□□□ -1.8
TRAV39-201ENST00000390466 KIF4AO95239 1232 aa3.79□□□□□ -1.8
TRAV39-201ENST00000390466 FTCDO95954 541 aa3.79□□□□□ -1.8
TRAV39-201ENST00000390466 FESP07332 822 aa3.79□□□□□ -1.8
TRAV39-201ENST00000390466 CSB-PGBD3P0DP91 1061 aa3.79□□□□□ -1.8
TRAV39-201ENST00000390466 FCER1AP12319 257 aa3.79□□□□□ -1.8
TRAV39-201ENST00000390466 ALAS1P13196 640 aa3.79□□□□□ -1.8
TRAV39-201ENST00000390466 EZRP15311 586 aaKnown RBP3.79□□□□□ -1.8
TRAV39-201ENST00000390466 NQO1P15559 274 aaKnown RBP3.79□□□□□ -1.8
TRAV39-201ENST00000390466 TATP17735 454 aaPredicted RBP3.79□□□□□ -1.8
TRAV39-201ENST00000390466 GNAZP19086 355 aa3.79□□□□□ -1.8
TRAV39-201ENST00000390466 TRIM21P19474 475 aaKnown RBP3.79□□□□□ -1.8
TRAV39-201ENST00000390466 RDXP35241 583 aaKnown RBP3.79□□□□□ -1.8
TRAV39-201ENST00000390466 PRPHP41219 470 aa3.79□□□□□ -1.8
TRAV39-201ENST00000390466 MAGEA1P43355 309 aa3.79□□□□□ -1.8
TRAV39-201ENST00000390466 MNX1P50219 401 aaPredicted RBP3.79□□□□□ -1.8
TRAV39-201ENST00000390466 RPS6KA3P51812 740 aa3.79□□□□□ -1.8
TRAV39-201ENST00000390466 GUCY2FP51841 1108 aa3.79□□□□□ -1.8
TRAV39-201ENST00000390466 MARSP56192 900 aaKnown RBP3.79□□□□□ -1.8
TRAV39-201ENST00000390466 KCNJ2P63252 427 aa3.79□□□□□ -1.8
TRAV39-201ENST00000390466 GFPT1Q06210 699 aaPredicted RBP3.79□□□□□ -1.8
TRAV39-201ENST00000390466 KLRC3Q07444 240 aa3.79□□□□□ -1.8
TRAV39-201ENST00000390466 MGAT5Q09328 741 aa3.79□□□□□ -1.8
TRAV39-201ENST00000390466 BNIP1Q12981 228 aa3.79□□□□□ -1.8
TRAV39-201ENST00000390466 STK4Q13043 487 aa3.79□□□□□ -1.8
TRAV39-201ENST00000390466 SLMAPQ14BN4 828 aa3.79□□□□□ -1.8
TRAV39-201ENST00000390466 NKX1-1Q15270 411 aaPredicted RBP3.79□□□□□ -1.8
TRAV39-201ENST00000390466 MAN2A1Q16706 1144 aa3.79□□□□□ -1.8
TRAV39-201ENST00000390466 PFKFB3Q16875 520 aaPredicted RBP3.79□□□□□ -1.8
TRAV39-201ENST00000390466 CFAP221Q4G0U5 840 aa3.79□□□□□ -1.8
TRAV39-201ENST00000390466 VWA3BQ502W6 1294 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms