RNA–Protein interactions for RNA: ENST00000390462.1

TRAV35-201, Transcript of T cell receptor alpha variable 35, humanhuman

BASIC

Gene TRAV35, Length 330 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV35-201ENST00000390462 KIAA0319LQ8IZA0 1049 aa7.6□□□□□ -1.19
TRAV35-201ENST00000390462 CRIPAKQ8N1N5 446 aa7.6□□□□□ -1.19
TRAV35-201ENST00000390462 CELF4Q9BZC1 486 aaKnown RBP7.6□□□□□ -1.19
TRAV35-201ENST00000390462 NUP62CLQ9H1M0 184 aa7.6□□□□□ -1.19
TRAV35-201ENST00000390462 TBC1D22BQ9NU19 505 aa7.6□□□□□ -1.19
TRAV35-201ENST00000390462 TTLL3Q9Y4R7 772 aa7.6□□□□□ -1.19
TRAV35-201ENST00000390462 TSPOAP1O95153 1857 aa7.6□□□□□ -1.19
TRAV35-201ENST00000390462 SENP3-EIF4A1A0A087X0R7 540 aa7.59□□□□□ -1.19
TRAV35-201ENST00000390462 H3BML4 177 aa7.59□□□□□ -1.19
TRAV35-201ENST00000390462 AXIN1O15169 862 aa7.59□□□□□ -1.19
TRAV35-201ENST00000390462 SHOXO15266 292 aa7.59□□□□□ -1.19
TRAV35-201ENST00000390462 DGAT1O75907 488 aa7.59□□□□□ -1.19
TRAV35-201ENST00000390462 TBC1D8O95759 1140 aa7.59□□□□□ -1.19
TRAV35-201ENST00000390462 CD4P01730 458 aa7.59□□□□□ -1.19
TRAV35-201ENST00000390462 ABCB4P21439 1286 aa7.59□□□□□ -1.19
TRAV35-201ENST00000390462 GRK2P25098 689 aa7.59□□□□□ -1.19
TRAV35-201ENST00000390462 SMARCA1P28370 1054 aa7.59□□□□□ -1.19
TRAV35-201ENST00000390462 PIK3CBP42338 1070 aa7.59□□□□□ -1.19
TRAV35-201ENST00000390462 RING1Q06587 406 aa7.59□□□□□ -1.19
TRAV35-201ENST00000390462 NBPF8Q3BBV2 869 aa7.59□□□□□ -1.19
TRAV35-201ENST00000390462 PKDCCQ504Y2 493 aa7.59□□□□□ -1.19
TRAV35-201ENST00000390462 RNF220Q5VTB9 566 aa7.59□□□□□ -1.19
TRAV35-201ENST00000390462 CREB3L3Q68CJ9 461 aa7.59□□□□□ -1.19
TRAV35-201ENST00000390462 DENND5AQ6IQ26 1287 aa7.59□□□□□ -1.19
TRAV35-201ENST00000390462 TXNDC11Q6PKC3 985 aa7.59□□□□□ -1.19
TRAV35-201ENST00000390462 PDZD4Q76G19 769 aaPredicted RBP7.59□□□□□ -1.19
TRAV35-201ENST00000390462 CAMKK1Q8N5S9 505 aa7.59□□□□□ -1.19
TRAV35-201ENST00000390462 RPGRQ92834 1020 aaKnown RBP7.59□□□□□ -1.19
TRAV35-201ENST00000390462 ZBTB10Q96DT7 871 aa7.59□□□□□ -1.19
TRAV35-201ENST00000390462 C1GALT1C1Q96EU7 318 aa7.59□□□□□ -1.19
TRAV35-201ENST00000390462 UBXN10Q96LJ8 280 aa7.59□□□□□ -1.19
TRAV35-201ENST00000390462 ZFYVE21Q9BQ24 234 aa7.59□□□□□ -1.19
TRAV35-201ENST00000390462 IGFLR1Q9H665 355 aa7.59□□□□□ -1.19
TRAV35-201ENST00000390462 CCM2LQ9NUG4 571 aaPredicted RBP7.59□□□□□ -1.19
TRAV35-201ENST00000390462 DNAJB12Q9NXW2 375 aaKnown RBP7.59□□□□□ -1.19
TRAV35-201ENST00000390462 HCN2Q9UL51 889 aa7.59□□□□□ -1.19
TRAV35-201ENST00000390462 L1RE1Q9UN81 338 aa7.59□□□□□ -1.19
TRAV35-201ENST00000390462 TRIM33Q9UPN9 1127 aa7.59□□□□□ -1.19
TRAV35-201ENST00000390462 CRYL1Q9Y2S2 319 aa7.59□□□□□ -1.19
TRAV35-201ENST00000390462 NOC2LQ9Y3T9 749 aaKnown RBP7.59□□□□□ -1.19
TRAV35-201ENST00000390462 A0A087WV62 115 aa7.58□□□□□ -1.2
TRAV35-201ENST00000390462 RRN3P2A6NIE6 340 aa7.58□□□□□ -1.2
TRAV35-201ENST00000390462 FAM155AB1AL88 458 aaPredicted RBP7.58□□□□□ -1.2
TRAV35-201ENST00000390462 EYA2O00167 538 aa7.58□□□□□ -1.2
TRAV35-201ENST00000390462 TMCC2O75069 709 aa7.58□□□□□ -1.2
TRAV35-201ENST00000390462 BAIAP3O94812 1187 aa7.58□□□□□ -1.2
TRAV35-201ENST00000390462 PTMAP06454 111 aaKnown RBP7.58□□□□□ -1.2
TRAV35-201ENST00000390462 SRGAP2CP0DJJ0 459 aa7.58□□□□□ -1.2
TRAV35-201ENST00000390462 TNFSF4P23510 183 aa7.58□□□□□ -1.2
TRAV35-201ENST00000390462 PEX2P28328 305 aa7.58□□□□□ -1.2
TRAV35-201ENST00000390462 GPR85P60893 370 aa7.58□□□□□ -1.2
TRAV35-201ENST00000390462 AUHQ13825 339 aaKnown RBP7.58□□□□□ -1.2
TRAV35-201ENST00000390462 BLMHQ13867 455 aa7.58□□□□□ -1.2
TRAV35-201ENST00000390462 PDE3AQ14432 1141 aa7.58□□□□□ -1.2
TRAV35-201ENST00000390462 KIF4BQ2VIQ3 1234 aa7.58□□□□□ -1.2
TRAV35-201ENST00000390462 ZC3H12AQ5D1E8 599 aaKnown RBP7.58□□□□□ -1.2
TRAV35-201ENST00000390462 AGAP9Q5VTM2 703 aa7.58□□□□□ -1.2
TRAV35-201ENST00000390462 RSPO2Q6UXX9 243 aaPredicted RBP7.58□□□□□ -1.2
TRAV35-201ENST00000390462 DENND1CQ8IV53 801 aa7.58□□□□□ -1.2
TRAV35-201ENST00000390462 HDAC2Q92769 488 aaKnown RBP7.58□□□□□ -1.2
TRAV35-201ENST00000390462 KIAA1191Q96A73 305 aa7.58□□□□□ -1.2
TRAV35-201ENST00000390462 SEC62Q99442 399 aaKnown RBP7.58□□□□□ -1.2
TRAV35-201ENST00000390462 CENPOQ9BU64 300 aa7.58□□□□□ -1.2
TRAV35-201ENST00000390462 PHF20Q9BVI0 1012 aa7.58□□□□□ -1.2
TRAV35-201ENST00000390462 SLC26A6Q9BXS9 759 aa7.58□□□□□ -1.2
TRAV35-201ENST00000390462 HIF3AQ9Y2N7 669 aa7.58□□□□□ -1.2
TRAV35-201ENST00000390462 CCDC88BA6NC98 1476 aa7.57□□□□□ -1.2
TRAV35-201ENST00000390462 B3GALT2O43825 422 aa7.57□□□□□ -1.2
TRAV35-201ENST00000390462 MAFKO60675 156 aa7.57□□□□□ -1.2
TRAV35-201ENST00000390462 THBS1P07996 1170 aa7.57□□□□□ -1.2
TRAV35-201ENST00000390462 EPHA1P21709 976 aa7.57□□□□□ -1.2
TRAV35-201ENST00000390462 ITGA6P23229 1130 aa7.57□□□□□ -1.2
TRAV35-201ENST00000390462 MAOBP27338 520 aa7.57□□□□□ -1.2
TRAV35-201ENST00000390462 CACNB3P54284 484 aa7.57□□□□□ -1.2
TRAV35-201ENST00000390462 ICA1Q05084 483 aa7.57□□□□□ -1.2
TRAV35-201ENST00000390462 TAF11Q15544 211 aa7.57□□□□□ -1.2
TRAV35-201ENST00000390462 C4orf50Q6ZRC1 276 aa7.57□□□□□ -1.2
TRAV35-201ENST00000390462 TTLL7Q6ZT98 887 aa7.57□□□□□ -1.2
TRAV35-201ENST00000390462 OVCH1Q7RTY7 1134 aa7.57□□□□□ -1.2
TRAV35-201ENST00000390462 ZSCAN30Q86W11 494 aa7.57□□□□□ -1.2
TRAV35-201ENST00000390462 HID1Q8IV36 788 aa7.57□□□□□ -1.2
TRAV35-201ENST00000390462 KREMEN2Q8NCW0 462 aa7.57□□□□□ -1.2
TRAV35-201ENST00000390462 PCDH19Q8TAB3 1148 aa7.57□□□□□ -1.2
TRAV35-201ENST00000390462 NUP133Q8WUM0 1156 aa7.57□□□□□ -1.2
TRAV35-201ENST00000390462 MVB12AQ96EY5 273 aa7.57□□□□□ -1.2
TRAV35-201ENST00000390462 DDX11Q96FC9 970 aa7.57□□□□□ -1.2
TRAV35-201ENST00000390462 WDR89Q96FK6 387 aaPredicted RBP7.57□□□□□ -1.2
TRAV35-201ENST00000390462 B3GNT5Q9BYG0 378 aa7.57□□□□□ -1.2
TRAV35-201ENST00000390462 RETREG1Q9H6L5 497 aa7.57□□□□□ -1.2
TRAV35-201ENST00000390462 CERS4Q9HA82 394 aa7.57□□□□□ -1.2
TRAV35-201ENST00000390462 DMRT3Q9NQL9 472 aa7.57□□□□□ -1.2
TRAV35-201ENST00000390462 SMYD2Q9NRG4 433 aa7.57□□□□□ -1.2
TRAV35-201ENST00000390462 DIS3Q9Y2L1 958 aaKnown RBP7.57□□□□□ -1.2
TRAV35-201ENST00000390462 TMX2Q9Y320 296 aa7.57□□□□□ -1.2
TRAV35-201ENST00000390462 PCDHA11Q9Y5I1 949 aa7.57□□□□□ -1.2
TRAV35-201ENST00000390462 CEP170Q5SW79 1584 aa7.57□□□□□ -1.2
TRAV35-201ENST00000390462 DIP2BQ9P265 1576 aa7.57□□□□□ -1.2
TRAV35-201ENST00000390462 SHROOM2Q13796 1616 aa7.56□□□□□ -1.2
TRAV35-201ENST00000390462 GRIN2BQ13224 1484 aa7.56□□□□□ -1.2
TRAV35-201ENST00000390462 NRG2O14511 850 aaPredicted RBP7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms