RNA–Protein interactions for RNA: ENST00000389995.4

SOD1-202, Transcript of superoxide dismutase 1, humanhuman

TSL 3 BASIC

Gene SOD1, Length 865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-202ENST00000389995 SP2Q02086 613 aa13.8□□□□□ -0.2
SOD1-202ENST00000389995 SMAD2Q15796 467 aaKnown RBP13.8□□□□□ -0.2
SOD1-202ENST00000389995 CTC1Q2NKJ3 1217 aa13.8□□□□□ -0.2
SOD1-202ENST00000389995 HERC4Q5GLZ8 1057 aaPredicted RBP13.8□□□□□ -0.2
SOD1-202ENST00000389995 MYSM1Q5VVJ2 828 aa13.8□□□□□ -0.2
SOD1-202ENST00000389995 ADGRF4Q8IZF3 695 aa13.8□□□□□ -0.2
SOD1-202ENST00000389995 SEPT8Q92599 483 aa13.8□□□□□ -0.2
SOD1-202ENST00000389995 FAM227BQ96M60 508 aa13.8□□□□□ -0.2
SOD1-202ENST00000389995 SPATA33Q96N06 139 aa13.8□□□□□ -0.2
SOD1-202ENST00000389995 IWS1Q96ST2 819 aa13.8□□□□□ -0.2
SOD1-202ENST00000389995 C16orf70Q9BSU1 422 aa13.8□□□□□ -0.2
SOD1-202ENST00000389995 UPF3BQ9BZI7 483 aaKnown RBP13.8□□□□□ -0.2
SOD1-202ENST00000389995 VAT1LQ9HCJ6 419 aa13.8□□□□□ -0.2
SOD1-202ENST00000389995 PXMP2Q9NR77 195 aa13.8□□□□□ -0.2
SOD1-202ENST00000389995 PNMA2Q9UL42 364 aa13.8□□□□□ -0.2
SOD1-202ENST00000389995 ABCB11O95342 1321 aa13.8□□□□□ -0.2
SOD1-202ENST00000389995 PLXNA3P51805 1871 aa13.8□□□□□ -0.2
SOD1-202ENST00000389995 RIF1Q5UIP0 2472 aaKnown RBP13.8□□□□□ -0.2
SOD1-202ENST00000389995 GGPS1O95749 300 aa13.79□□□□□ -0.2
SOD1-202ENST00000389995 CFBP00751 764 aa13.79□□□□□ -0.2
SOD1-202ENST00000389995 ALX1Q15699 326 aa13.79□□□□□ -0.2
SOD1-202ENST00000389995 QRICH1Q2TAL8 776 aa13.79□□□□□ -0.2
SOD1-202ENST00000389995 TBC1D10CQ8IV04 446 aa13.79□□□□□ -0.2
SOD1-202ENST00000389995 IL31RAQ8NI17 732 aa13.79□□□□□ -0.2
SOD1-202ENST00000389995 FAM86C1Q9NVL1 165 aa13.79□□□□□ -0.2
SOD1-202ENST00000389995 SUPT16HQ9Y5B9 1047 aaKnown RBP13.79□□□□□ -0.2
SOD1-202ENST00000389995 DCHS1Q96JQ0 3298 aa13.79□□□□□ -0.2
SOD1-202ENST00000389995 A0A0D9SFI3 127 aa13.78□□□□□ -0.2
SOD1-202ENST00000389995 C17orf102A2RUQ5 167 aa13.78□□□□□ -0.2
SOD1-202ENST00000389995 STXBP3O00186 592 aa13.78□□□□□ -0.2
SOD1-202ENST00000389995 OPLAHO14841 1288 aa13.78□□□□□ -0.2
SOD1-202ENST00000389995 DHX16O60231 1041 aaKnown RBP13.78□□□□□ -0.2
SOD1-202ENST00000389995 PPFIA4O75335 1185 aa13.78□□□□□ -0.2
SOD1-202ENST00000389995 LINC00271P0C7V0 271 aa13.78□□□□□ -0.2
SOD1-202ENST00000389995 SMIM10L2AP0DMW4 78 aa13.78□□□□□ -0.2
SOD1-202ENST00000389995 SMIM10L2BP0DMW5 78 aa13.78□□□□□ -0.2
SOD1-202ENST00000389995 HOXD8P13378 290 aaPredicted RBP13.78□□□□□ -0.2
SOD1-202ENST00000389995 MX1P20591 662 aa13.78□□□□□ -0.2
SOD1-202ENST00000389995 CELF3Q5SZQ8 465 aaKnown RBP13.78□□□□□ -0.2
SOD1-202ENST00000389995 FIBCD1Q8N539 461 aa13.78□□□□□ -0.2
SOD1-202ENST00000389995 EDAQ92838 391 aa13.78□□□□□ -0.2
SOD1-202ENST00000389995 PBXIP1Q96AQ6 731 aa13.78□□□□□ -0.2
SOD1-202ENST00000389995 IL17RAQ96F46 866 aa13.78□□□□□ -0.2
SOD1-202ENST00000389995 RNPEPQ9H4A4 650 aa13.78□□□□□ -0.2
SOD1-202ENST00000389995 NEDD4P46934 1319 aa13.78□□□□□ -0.2
SOD1-202ENST00000389995 TMEM221A6NGB7 291 aa13.77□□□□□ -0.21
SOD1-202ENST00000389995 M0R296 226 aa13.77□□□□□ -0.21
SOD1-202ENST00000389995 HSPD1P10809 573 aaKnown RBP13.77□□□□□ -0.21
SOD1-202ENST00000389995 UBA1P22314 1058 aaKnown RBP13.77□□□□□ -0.21
SOD1-202ENST00000389995 HOXA13P31271 388 aaPredicted RBP13.77□□□□□ -0.21
SOD1-202ENST00000389995 TCF15Q12870 199 aa13.77□□□□□ -0.21
SOD1-202ENST00000389995 GPATCH4Q5T3I0 446 aaKnown RBP13.77□□□□□ -0.21
SOD1-202ENST00000389995 MFSD6Q6ZSS7 791 aa13.77□□□□□ -0.21
SOD1-202ENST00000389995 ZNF589Q86UQ0 364 aaPredicted RBP13.77□□□□□ -0.21
SOD1-202ENST00000389995 MCF2L2Q86YR7 1114 aa13.77□□□□□ -0.21
SOD1-202ENST00000389995 TTC14Q96N46 770 aa13.77□□□□□ -0.21
SOD1-202ENST00000389995 ALG13Q9NP73 1137 aaKnown RBP13.77□□□□□ -0.21
SOD1-202ENST00000389995 SETD4Q9NVD3 440 aa13.77□□□□□ -0.21
SOD1-202ENST00000389995 CD207Q9UJ71 328 aa13.77□□□□□ -0.21
SOD1-202ENST00000389995 RCAN3Q9UKA8 241 aa13.77□□□□□ -0.21
SOD1-202ENST00000389995 TELO2Q9Y4R8 837 aa13.77□□□□□ -0.21
SOD1-202ENST00000389995 H3BRB1 525 aa13.76□□□□□ -0.21
SOD1-202ENST00000389995 BMPR1AP36894 532 aa13.76□□□□□ -0.21
SOD1-202ENST00000389995 SMAD4Q13485 552 aaKnown RBP13.76□□□□□ -0.21
SOD1-202ENST00000389995 TRIM67Q6ZTA4 783 aa13.76□□□□□ -0.21
SOD1-202ENST00000389995 PNMA1Q8ND90 353 aa13.76□□□□□ -0.21
SOD1-202ENST00000389995 POP1Q99575 1024 aaKnown RBP13.76□□□□□ -0.21
SOD1-202ENST00000389995 PDCD2LQ9BRP1 358 aa13.76□□□□□ -0.21
SOD1-202ENST00000389995 TUT1Q9H6E5 874 aaKnown RBP13.76□□□□□ -0.21
SOD1-202ENST00000389995 JMJD4Q9H9V9 463 aa13.76□□□□□ -0.21
SOD1-202ENST00000389995 HELLSQ9NRZ9 838 aa13.76□□□□□ -0.21
SOD1-202ENST00000389995 MRPL11Q9Y3B7 192 aaKnown RBP13.76□□□□□ -0.21
SOD1-202ENST00000389995 FAM186AA6NE01 2351 aa13.76□□□□□ -0.21
SOD1-202ENST00000389995 C5orf67F2Z3F1 127 aa13.75□□□□□ -0.21
SOD1-202ENST00000389995 LGALS2P05162 132 aa13.75□□□□□ -0.21
SOD1-202ENST00000389995 DNAJB1P25685 340 aa13.75□□□□□ -0.21
SOD1-202ENST00000389995 HOXC8P31273 242 aa13.75□□□□□ -0.21
SOD1-202ENST00000389995 HSD17B4P51659 736 aa13.75□□□□□ -0.21
SOD1-202ENST00000389995 PTPN5P54829 565 aa13.75□□□□□ -0.21
SOD1-202ENST00000389995 ADAM15Q13444 863 aa13.75□□□□□ -0.21
SOD1-202ENST00000389995 CAMK1Q14012 370 aa13.75□□□□□ -0.21
SOD1-202ENST00000389995 ADGRD2Q7Z7M1 963 aa13.75□□□□□ -0.21
SOD1-202ENST00000389995 TRIM50Q86XT4 487 aa13.75□□□□□ -0.21
SOD1-202ENST00000389995 MLXIPQ9HAP2 919 aa13.75□□□□□ -0.21
SOD1-202ENST00000389995 FNDC1Q4ZHG4 1894 aaPredicted RBP13.74□□□□□ -0.21
SOD1-202ENST00000389995 ADGRA3Q8IWK6 1321 aa13.74□□□□□ -0.21
SOD1-202ENST00000389995 SALL3Q9BXA9 1300 aa13.74□□□□□ -0.21
SOD1-202ENST00000389995 NCK2O43639 380 aa13.74□□□□□ -0.21
SOD1-202ENST00000389995 ST18O60284 1047 aa13.74□□□□□ -0.21
SOD1-202ENST00000389995 PPP1R11O60927 126 aaPredicted RBP13.74□□□□□ -0.21
SOD1-202ENST00000389995 CHRNA1P02708 482 aa13.74□□□□□ -0.21
SOD1-202ENST00000389995 NDUFV1P49821 464 aa13.74□□□□□ -0.21
SOD1-202ENST00000389995 VCPP55072 806 aaKnown RBP13.74□□□□□ -0.21
SOD1-202ENST00000389995 NMIQ13287 307 aaPredicted RBP13.74□□□□□ -0.21
SOD1-202ENST00000389995 PGM5Q15124 567 aa13.74□□□□□ -0.21
SOD1-202ENST00000389995 MCMDC2Q4G0Z9 681 aa13.74□□□□□ -0.21
SOD1-202ENST00000389995 VSIG10LQ86VR7 867 aa13.74□□□□□ -0.21
SOD1-202ENST00000389995 C11orf84Q9BUA3 381 aaPredicted RBP13.74□□□□□ -0.21
SOD1-202ENST00000389995 KAT14Q9H8E8 782 aa13.74□□□□□ -0.21
SOD1-202ENST00000389995 CLEC1BQ9P126 229 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms