RNA–Protein interactions for RNA: ENST00000389418.8

PTPRN2-203, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-203ENST00000389418 MAN1B1Q9UKM7 699 aa14.17□□□□□ -0.14
PTPRN2-203ENST00000389418 HGSO14964 777 aaPredicted RBP14.17□□□□□ -0.14
PTPRN2-203ENST00000389418 RABL6Q3YEC7 729 aaPredicted RBP14.17□□□□□ -0.14
PTPRN2-203ENST00000389418 ZNF658Q5TYW1 1059 aaPredicted RBP14.17□□□□□ -0.14
PTPRN2-203ENST00000389418 TMTC3Q6ZXV5 915 aa14.17□□□□□ -0.14
PTPRN2-203ENST00000389418 PHLDB2Q86SQ0 1253 aa14.17□□□□□ -0.14
PTPRN2-203ENST00000389418 MICALL2Q8IY33 904 aa14.17□□□□□ -0.14
PTPRN2-203ENST00000389418 P2RX5Q93086 422 aa14.17□□□□□ -0.14
PTPRN2-203ENST00000389418 BHMT2Q9H2M3 363 aa14.17□□□□□ -0.14
PTPRN2-203ENST00000389418 HOXC10Q9NYD6 342 aa14.17□□□□□ -0.14
PTPRN2-203ENST00000389418 ODF2LQ9ULJ1 636 aa14.17□□□□□ -0.14
PTPRN2-203ENST00000389418 GOLGA6CA6NDK9 693 aa14.17□□□□□ -0.14
PTPRN2-203ENST00000389418 GOLGA6BA6NDN3 693 aa14.17□□□□□ -0.14
PTPRN2-203ENST00000389418 BUB1O43683 1085 aa14.17□□□□□ -0.14
PTPRN2-203ENST00000389418 GOLGA6DP0CG33 693 aa14.17□□□□□ -0.14
PTPRN2-203ENST00000389418 CDC27P30260 824 aa14.17□□□□□ -0.14
PTPRN2-203ENST00000389418 HMGCS2P54868 508 aa14.17□□□□□ -0.14
PTPRN2-203ENST00000389418 ITIH3Q06033 890 aa14.17□□□□□ -0.14
PTPRN2-203ENST00000389418 SURF1Q15526 300 aa14.17□□□□□ -0.14
PTPRN2-203ENST00000389418 SCYL2Q6P3W7 929 aa14.17□□□□□ -0.14
PTPRN2-203ENST00000389418 PDXDC2PQ6P474 469 aa14.17□□□□□ -0.14
PTPRN2-203ENST00000389418 STAG2Q8N3U4 1231 aa14.17□□□□□ -0.14
PTPRN2-203ENST00000389418 GRK7Q8WTQ7 553 aa14.17□□□□□ -0.14
PTPRN2-203ENST00000389418 NLRP4Q96MN2 994 aa14.17□□□□□ -0.14
PTPRN2-203ENST00000389418 GOLGA6AQ9NYA3 693 aa14.17□□□□□ -0.14
PTPRN2-203ENST00000389418 PSAPP07602 524 aa14.16□□□□□ -0.14
PTPRN2-203ENST00000389418 TTBK2Q6IQ55 1244 aa14.16□□□□□ -0.14
PTPRN2-203ENST00000389418 CCDC121Q6ZUS5 278 aa14.16□□□□□ -0.14
PTPRN2-203ENST00000389418 ZBTB33Q86T24 672 aa14.16□□□□□ -0.14
PTPRN2-203ENST00000389418 HYOU1Q9Y4L1 999 aa14.16□□□□□ -0.14
PTPRN2-203ENST00000389418 MROH7-TTC4A0A0A0MT08 1334 aa14.16□□□□□ -0.14
PTPRN2-203ENST00000389418 UTYO14607 1347 aa14.16□□□□□ -0.14
PTPRN2-203ENST00000389418 GOLGA8IPA6NC78 632 aa14.16□□□□□ -0.14
PTPRN2-203ENST00000389418 GOLGA8JA6NMD2 632 aa14.16□□□□□ -0.14
PTPRN2-203ENST00000389418 TLR3O15455 904 aaKnown RBP14.16□□□□□ -0.14
PTPRN2-203ENST00000389418 SNRNP48Q6IEG0 339 aaKnown RBP14.16□□□□□ -0.14
PTPRN2-203ENST00000389418 APOBEC3FQ8IUX4 373 aaKnown RBP14.16□□□□□ -0.14
PTPRN2-203ENST00000389418 SAMSN1Q9NSI8 373 aaKnown RBP14.16□□□□□ -0.14
PTPRN2-203ENST00000389418 TAF6LQ9Y6J9 622 aa14.16□□□□□ -0.14
PTPRN2-203ENST00000389418 IFNB1P01574 187 aa14.16□□□□□ -0.14
PTPRN2-203ENST00000389418 DPEP1P16444 411 aa14.16□□□□□ -0.14
PTPRN2-203ENST00000389418 LMNB1P20700 586 aa14.16□□□□□ -0.14
PTPRN2-203ENST00000389418 NR2F2P24468 414 aa14.16□□□□□ -0.14
PTPRN2-203ENST00000389418 LACTBP83111 547 aaPredicted RBP14.16□□□□□ -0.14
PTPRN2-203ENST00000389418 MAP7D1Q3KQU3 841 aa14.16□□□□□ -0.14
PTPRN2-203ENST00000389418 SND1Q7KZF4 910 aaKnown RBP eCLIP14.16□□□□□ -0.142e-6■■■■□ 20.8
PTPRN2-203ENST00000389418 CRAMP1Q96RY5 1269 aa14.16□□□□□ -0.14
PTPRN2-203ENST00000389418 RPS6KC1Q96S38 1066 aa14.16□□□□□ -0.14
PTPRN2-203ENST00000389418 KIF2CQ99661 725 aa14.16□□□□□ -0.14
PTPRN2-203ENST00000389418 RAB20Q9NX57 234 aa14.16□□□□□ -0.14
PTPRN2-203ENST00000389418 SPATA31A5Q5VU36 1347 aa14.16□□□□□ -0.14
PTPRN2-203ENST00000389418 SPATA31A7Q8IWB4 1347 aa14.16□□□□□ -0.14
PTPRN2-203ENST00000389418 MAN2A1Q16706 1144 aa14.16□□□□□ -0.14
PTPRN2-203ENST00000389418 PPP4R3CPQ6ZMV5 832 aa14.16□□□□□ -0.14
PTPRN2-203ENST00000389418 CCDC89Q8N998 374 aa14.16□□□□□ -0.14
PTPRN2-203ENST00000389418 GIMAP8Q8ND71 665 aaPredicted RBP14.16□□□□□ -0.14
PTPRN2-203ENST00000389418 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.16□□□□□ -0.14
PTPRN2-203ENST00000389418 TBC1D31Q96DN5 1066 aa14.16□□□□□ -0.14
PTPRN2-203ENST00000389418 KMT5AQ9NQR1 393 aa14.16□□□□□ -0.14
PTPRN2-203ENST00000389418 CNOT7Q9UIV1 285 aaKnown RBP14.16□□□□□ -0.14
PTPRN2-203ENST00000389418 NUB1Q9Y5A7 615 aa14.16□□□□□ -0.14
PTPRN2-203ENST00000389418 MB21D2Q8IYB1 491 aaPredicted RBP14.15□□□□□ -0.14
PTPRN2-203ENST00000389418 AFAP1L2Q8N4X5 818 aa14.15□□□□□ -0.14
PTPRN2-203ENST00000389418 CCDC110Q8TBZ0 833 aa14.15□□□□□ -0.14
PTPRN2-203ENST00000389418 RMDN3Q96TC7 470 aa14.15□□□□□ -0.14
PTPRN2-203ENST00000389418 NCOA3Q9Y6Q9 1424 aa14.15□□□□□ -0.14
PTPRN2-203ENST00000389418 RNF8O76064 485 aa14.15□□□□□ -0.14
PTPRN2-203ENST00000389418 PLCG1P19174 1290 aa14.15□□□□□ -0.14
PTPRN2-203ENST00000389418 GBP1P32455 592 aa14.15□□□□□ -0.14
PTPRN2-203ENST00000389418 DDIT3P35638 169 aa14.15□□□□□ -0.14
PTPRN2-203ENST00000389418 CCDC6Q16204 474 aa14.15□□□□□ -0.14
PTPRN2-203ENST00000389418 BARGINQ6ZT62 677 aa14.15□□□□□ -0.14
PTPRN2-203ENST00000389418 SRGAP1Q7Z6B7 1085 aa14.15□□□□□ -0.14
PTPRN2-203ENST00000389418 PP2D1A8MPX8 630 aa14.15□□□□□ -0.14
PTPRN2-203ENST00000389418 ATP1A3P13637 1013 aa14.15□□□□□ -0.14
PTPRN2-203ENST00000389418 NSFP46459 744 aaKnown RBP14.15□□□□□ -0.14
PTPRN2-203ENST00000389418 P3H4Q92791 437 aa14.15□□□□□ -0.14
PTPRN2-203ENST00000389418 PLCB1Q9NQ66 1216 aa14.15□□□□□ -0.14
PTPRN2-203ENST00000389418 FEM1BQ9UK73 627 aa14.15□□□□□ -0.14
PTPRN2-203ENST00000389418 ZDHHC9Q9Y397 364 aa14.15□□□□□ -0.14
PTPRN2-203ENST00000389418 CAPN9O14815 690 aa14.15□□□□□ -0.15
PTPRN2-203ENST00000389418 ZBTB5O15062 677 aa14.15□□□□□ -0.15
PTPRN2-203ENST00000389418 STAM2O75886 525 aa14.15□□□□□ -0.15
PTPRN2-203ENST00000389418 CDC25BP30305 580 aa14.15□□□□□ -0.15
PTPRN2-203ENST00000389418 SF3B3Q15393 1217 aaKnown RBP14.15□□□□□ -0.15
PTPRN2-203ENST00000389418 NAA35Q5VZE5 725 aa14.15□□□□□ -0.15
PTPRN2-203ENST00000389418 RNF207Q6ZRF8 634 aa14.15□□□□□ -0.15
PTPRN2-203ENST00000389418 STOX1Q6ZVD7 989 aa14.15□□□□□ -0.15
PTPRN2-203ENST00000389418 ZNF34Q8IZ26 560 aa14.15□□□□□ -0.15
PTPRN2-203ENST00000389418 ZNF710Q8N1W2 664 aa14.15□□□□□ -0.15
PTPRN2-203ENST00000389418 ENOX1Q8TC92 643 aaKnown RBP14.15□□□□□ -0.15
PTPRN2-203ENST00000389418 PARVGQ9HBI0 331 aa14.15□□□□□ -0.15
PTPRN2-203ENST00000389418 PNPLA7Q6ZV29 1317 aa14.14□□□□□ -0.15
PTPRN2-203ENST00000389418 COPB2P35606 906 aa14.14□□□□□ -0.15
PTPRN2-203ENST00000389418 TFAMQ00059 246 aaKnown RBP14.14□□□□□ -0.15
PTPRN2-203ENST00000389418 MYL7Q01449 175 aa14.14□□□□□ -0.15
PTPRN2-203ENST00000389418 FAM186BQ8IYM0 893 aa14.14□□□□□ -0.15
PTPRN2-203ENST00000389418 NXF1Q9UBU9 619 aaKnown RBP14.14□□□□□ -0.15
PTPRN2-203ENST00000389418 HERC5Q9UII4 1024 aaKnown RBP14.14□□□□□ -0.15
PTPRN2-203ENST00000389418 DAGLAQ9Y4D2 1042 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms