RNA–Protein interactions for RNA: ENST00000389212.7

RAPGEF3-201, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RAPGEF3, Length 3,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-201ENST00000389212 EHD2Q9NZN4 543 aa12.94□□□□□ -0.34
RAPGEF3-201ENST00000389212 ESYT2A0FGR8 921 aa12.93□□□□□ -0.34
RAPGEF3-201ENST00000389212 LRRC53A6NM62 1247 aa12.93□□□□□ -0.34
RAPGEF3-201ENST00000389212 MAP2K7O14733 419 aa12.93□□□□□ -0.34
RAPGEF3-201ENST00000389212 ATP8B1O43520 1251 aa12.93□□□□□ -0.34
RAPGEF3-201ENST00000389212 MOCS3O95396 460 aa12.93□□□□□ -0.34
RAPGEF3-201ENST00000389212 EIF4A3P38919 411 aaKnown RBP12.93□□□□□ -0.34
RAPGEF3-201ENST00000389212 TADA2BQ86TJ2 420 aa12.93□□□□□ -0.34
RAPGEF3-201ENST00000389212 KIAA0825Q8IV33 1275 aa12.93□□□□□ -0.34
RAPGEF3-201ENST00000389212 L1RE1Q9UN81 338 aa12.93□□□□□ -0.34
RAPGEF3-201ENST00000389212 PNMA6FA0A0J9YX94 578 aa12.93□□□□□ -0.34
RAPGEF3-201ENST00000389212 POTEB3A0JP26 581 aa12.93□□□□□ -0.34
RAPGEF3-201ENST00000389212 LRRIQ3A6PVS8 624 aaPredicted RBP12.93□□□□□ -0.34
RAPGEF3-201ENST00000389212 POTECB2RU33 542 aa12.93□□□□□ -0.34
RAPGEF3-201ENST00000389212 MATR3P43243 847 aaKnown RBP eCLIP12.93□□□□□ -0.34
RAPGEF3-201ENST00000389212 FXR2P51116 673 aaKnown RBP eCLIP12.93□□□□□ -0.34
RAPGEF3-201ENST00000389212 POTEBQ6S5H4 581 aa12.93□□□□□ -0.34
RAPGEF3-201ENST00000389212 PSTPIP2Q9H939 334 aa12.93□□□□□ -0.34
RAPGEF3-201ENST00000389212 KIAA1024Q9UPX6 916 aa12.93□□□□□ -0.34
RAPGEF3-201ENST00000389212 GCKP35557 465 aa12.93□□□□□ -0.34
RAPGEF3-201ENST00000389212 NAP1L1P55209 391 aaKnown RBP12.93□□□□□ -0.34
RAPGEF3-201ENST00000389212 ARID5AQ03989 594 aa12.93□□□□□ -0.34
RAPGEF3-201ENST00000389212 CASP8Q14790 479 aa12.93□□□□□ -0.34
RAPGEF3-201ENST00000389212 HDXQ7Z353 690 aa12.93□□□□□ -0.34
RAPGEF3-201ENST00000389212 ZSCAN29Q8IWY8 852 aaPredicted RBP12.93□□□□□ -0.34
RAPGEF3-201ENST00000389212 ERGIC2Q96RQ1 377 aa12.93□□□□□ -0.34
RAPGEF3-201ENST00000389212 NUP58Q9BVL2 599 aa12.93□□□□□ -0.34
RAPGEF3-201ENST00000389212 VEZTQ9HBM0 779 aa12.93□□□□□ -0.34
RAPGEF3-201ENST00000389212 SIK3Q9Y2K2 1263 aa12.93□□□□□ -0.34
RAPGEF3-201ENST00000389212 NHSQ6T4R5 1651 aa12.92□□□□□ -0.34
RAPGEF3-201ENST00000389212 TRAF5O00463 557 aa12.92□□□□□ -0.34
RAPGEF3-201ENST00000389212 NCK2O43639 380 aa12.92□□□□□ -0.34
RAPGEF3-201ENST00000389212 AKR1B10O60218 316 aa12.92□□□□□ -0.34
RAPGEF3-201ENST00000389212 ERLIN1O75477 346 aa12.92□□□□□ -0.34
RAPGEF3-201ENST00000389212 KIF5AQ12840 1032 aa12.92□□□□□ -0.34
RAPGEF3-201ENST00000389212 COASYQ13057 564 aa12.92□□□□□ -0.34
RAPGEF3-201ENST00000389212 NAA25Q14CX7 972 aa12.92□□□□□ -0.34
RAPGEF3-201ENST00000389212 SPA17Q15506 151 aa12.92□□□□□ -0.34
RAPGEF3-201ENST00000389212 CEP89Q96ST8 783 aa12.92□□□□□ -0.34
RAPGEF3-201ENST00000389212 IFIH1Q9BYX4 1025 aaKnown RBP12.92□□□□□ -0.34
RAPGEF3-201ENST00000389212 RIC8AQ9NPQ8 531 aa12.92□□□□□ -0.34
RAPGEF3-201ENST00000389212 PCDHA12Q9UN75 941 aa12.92□□□□□ -0.34
RAPGEF3-201ENST00000389212 FAN1Q9Y2M0 1017 aa12.92□□□□□ -0.34
RAPGEF3-201ENST00000389212 MYH10P35580 1976 aa12.92□□□□□ -0.34
RAPGEF3-201ENST00000389212 IGKV6D-41A0A0C4DH26 115 aa12.92□□□□□ -0.34
RAPGEF3-201ENST00000389212 FAM170AA1A519 330 aa12.92□□□□□ -0.34
RAPGEF3-201ENST00000389212 SNHG28P0DPA3 235 aa12.92□□□□□ -0.34
RAPGEF3-201ENST00000389212 NOVP48745 357 aa12.92□□□□□ -0.34
RAPGEF3-201ENST00000389212 KIF11P52732 1056 aa12.92□□□□□ -0.34
RAPGEF3-201ENST00000389212 MAP9Q49MG5 647 aa12.92□□□□□ -0.34
RAPGEF3-201ENST00000389212 SLC30A10Q6XR72 485 aa12.92□□□□□ -0.34
RAPGEF3-201ENST00000389212 LRRC55Q6ZSA7 311 aa12.92□□□□□ -0.34
RAPGEF3-201ENST00000389212 CUL5Q93034 780 aa12.92□□□□□ -0.34
RAPGEF3-201ENST00000389212 EXOC4Q96A65 974 aa12.92□□□□□ -0.34
RAPGEF3-201ENST00000389212 STK17AQ9UEE5 414 aa12.92□□□□□ -0.34
RAPGEF3-201ENST00000389212 G3BP2Q9UN86 482 aaKnown RBP12.92□□□□□ -0.34
RAPGEF3-201ENST00000389212 ADAMTSL1Q8N6G6 1762 aa12.92□□□□□ -0.34
RAPGEF3-201ENST00000389212 MEIS1O00470 390 aa12.91□□□□□ -0.34
RAPGEF3-201ENST00000389212 BUB1O43683 1085 aa12.91□□□□□ -0.34
RAPGEF3-201ENST00000389212 GFPT1Q06210 699 aaPredicted RBP12.91□□□□□ -0.34
RAPGEF3-201ENST00000389212 EZH2Q15910 746 aaKnown RBP12.91□□□□□ -0.34
RAPGEF3-201ENST00000389212 PSMD1Q99460 953 aa12.91□□□□□ -0.34
RAPGEF3-201ENST00000389212 RAB34Q9BZG1 259 aa12.91□□□□□ -0.34
RAPGEF3-201ENST00000389212 DNAJC18Q9H819 358 aa12.91□□□□□ -0.34
RAPGEF3-201ENST00000389212 AFF2P51816 1311 aa12.91□□□□□ -0.34
RAPGEF3-201ENST00000389212 GDF11O95390 407 aa12.91□□□□□ -0.34
RAPGEF3-201ENST00000389212 MYBL2P10244 700 aa12.91□□□□□ -0.34
RAPGEF3-201ENST00000389212 NT5C2P49902 561 aa12.91□□□□□ -0.34
RAPGEF3-201ENST00000389212 VAV2P52735 878 aa12.91□□□□□ -0.34
RAPGEF3-201ENST00000389212 TUBB2AQ13885 445 aa12.91□□□□□ -0.34
RAPGEF3-201ENST00000389212 MAN2A1Q16706 1144 aa12.91□□□□□ -0.34
RAPGEF3-201ENST00000389212 QRICH1Q2TAL8 776 aa12.91□□□□□ -0.34
RAPGEF3-201ENST00000389212 USH1GQ495M9 461 aa12.91□□□□□ -0.34
RAPGEF3-201ENST00000389212 CCDC40Q4G0X9 1142 aa12.91□□□□□ -0.34
RAPGEF3-201ENST00000389212 TDRD12Q587J7 1177 aaKnown RBP12.91□□□□□ -0.34
RAPGEF3-201ENST00000389212 MSL1Q68DK7 614 aa12.91□□□□□ -0.34
RAPGEF3-201ENST00000389212 COG1Q8WTW3 980 aa12.91□□□□□ -0.34
RAPGEF3-201ENST00000389212 TUBB2BQ9BVA1 445 aa12.91□□□□□ -0.34
RAPGEF3-201ENST00000389212 BCAS3Q9H6U6 928 aa12.91□□□□□ -0.34
RAPGEF3-201ENST00000389212 PANK4Q9NVE7 773 aa12.91□□□□□ -0.34
RAPGEF3-201ENST00000389212 SALL4Q9UJQ4 1053 aa12.91□□□□□ -0.34
RAPGEF3-201ENST00000389212 PCDHA13Q9Y5I0 950 aa12.91□□□□□ -0.34
RAPGEF3-201ENST00000389212 POTEB2H3BUK9 544 aa12.91□□□□□ -0.34
RAPGEF3-201ENST00000389212 ZBTB5O15062 677 aa12.91□□□□□ -0.34
RAPGEF3-201ENST00000389212 SMARCA1P28370 1054 aa12.91□□□□□ -0.34
RAPGEF3-201ENST00000389212 GSCP56915 257 aaPredicted RBP12.91□□□□□ -0.34
RAPGEF3-201ENST00000389212 APOBEC3HQ6NTF7 200 aaKnown RBP12.91□□□□□ -0.34
RAPGEF3-201ENST00000389212 CACNA2D4Q7Z3S7 1137 aa12.91□□□□□ -0.34
RAPGEF3-201ENST00000389212 GUF1Q8N442 669 aaKnown RBP12.91□□□□□ -0.34
RAPGEF3-201ENST00000389212 RIN2Q8WYP3 895 aaPredicted RBP12.91□□□□□ -0.34
RAPGEF3-201ENST00000389212 DNAJC19Q96DA6 116 aa12.91□□□□□ -0.34
RAPGEF3-201ENST00000389212 PAIP2Q9BPZ3 127 aaKnown RBP12.91□□□□□ -0.34
RAPGEF3-201ENST00000389212 NUCKS1Q9H1E3 243 aaKnown RBP12.91□□□□□ -0.34
RAPGEF3-201ENST00000389212 POTEFA5A3E0 1075 aa12.9□□□□□ -0.34
RAPGEF3-201ENST00000389212 POTEIP0CG38 1075 aa12.9□□□□□ -0.34
RAPGEF3-201ENST00000389212 ADRA2BP18089 450 aa12.9□□□□□ -0.34
RAPGEF3-201ENST00000389212 HOXA10P31260 410 aaPredicted RBP12.9□□□□□ -0.34
RAPGEF3-201ENST00000389212 HNRNPH1P31943 449 aaKnown RBP12.9□□□□□ -0.34
RAPGEF3-201ENST00000389212 USP14P54578 494 aa12.9□□□□□ -0.34
RAPGEF3-201ENST00000389212 TMEM119Q4V9L6 283 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms