RNA–Protein interactions for RNA: ENST00000382100.7

VLDLR-203, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VLDLR, Length 9,163 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-203ENST00000382100 SCN8AQ9UQD0 1980 aa10.63□□□□□ -0.71
VLDLR-203ENST00000382100 ESPL1Q14674 2120 aa10.63□□□□□ -0.71
VLDLR-203ENST00000382100 SNUPNO95149 360 aaKnown RBP10.63□□□□□ -0.71
VLDLR-203ENST00000382100 CAPN1P07384 714 aa10.63□□□□□ -0.71
VLDLR-203ENST00000382100 TMOD1P28289 359 aa10.63□□□□□ -0.71
VLDLR-203ENST00000382100 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.63□□□□□ -0.71
VLDLR-203ENST00000382100 C4orf22Q6V702 233 aa10.63□□□□□ -0.71
VLDLR-203ENST00000382100 SNIP1Q8TAD8 396 aaKnown RBP10.63□□□□□ -0.71
VLDLR-203ENST00000382100 PBXIP1Q96AQ6 731 aa10.63□□□□□ -0.71
VLDLR-203ENST00000382100 KRCC1Q9NPI7 259 aaPredicted RBP10.63□□□□□ -0.71
VLDLR-203ENST00000382100 ADGRA3Q8IWK6 1321 aa10.63□□□□□ -0.71
VLDLR-203ENST00000382100 ARHGEF10O15013 1369 aa10.63□□□□□ -0.71
VLDLR-203ENST00000382100 NUP62P37198 522 aaPredicted RBP10.63□□□□□ -0.71
VLDLR-203ENST00000382100 SPTAN1Q13813 2472 aaKnown RBP10.63□□□□□ -0.71
VLDLR-203ENST00000382100 SYNJ1O43426 1573 aa10.63□□□□□ -0.71
VLDLR-203ENST00000382100 RGS12O14924 1447 aa10.63□□□□□ -0.71
VLDLR-203ENST00000382100 TK2O00142 265 aa10.63□□□□□ -0.71
VLDLR-203ENST00000382100 JAK1P23458 1154 aa10.63□□□□□ -0.71
VLDLR-203ENST00000382100 MSH2P43246 934 aa10.63□□□□□ -0.71
VLDLR-203ENST00000382100 KBTBD12Q3ZCT8 623 aa10.63□□□□□ -0.71
VLDLR-203ENST00000382100 CCDC80Q76M96 950 aa10.63□□□□□ -0.71
VLDLR-203ENST00000382100 HDAC11Q96DB2 347 aa10.63□□□□□ -0.71
VLDLR-203ENST00000382100 BEGAINQ9BUH8 593 aa10.63□□□□□ -0.71
VLDLR-203ENST00000382100 GGNBP2Q9H3C7 697 aa10.63□□□□□ -0.71
VLDLR-203ENST00000382100 VTI1BQ9UEU0 232 aa10.63□□□□□ -0.71
VLDLR-203ENST00000382100 SRPRBQ9Y5M8 271 aaKnown RBP10.63□□□□□ -0.71
VLDLR-203ENST00000382100 HNRNPCP07910 306 aaKnown RBP eCLIP10.63□□□□□ -0.71
VLDLR-203ENST00000382100 CCND1P24385 295 aa10.63□□□□□ -0.71
VLDLR-203ENST00000382100 PTK2Q05397 1052 aa10.63□□□□□ -0.71
VLDLR-203ENST00000382100 ATL2Q8NHH9 583 aa10.63□□□□□ -0.71
VLDLR-203ENST00000382100 APOL4Q9BPW4 351 aa10.63□□□□□ -0.71
VLDLR-203ENST00000382100 BOLA2Q9H3K6 86 aa10.63□□□□□ -0.71
VLDLR-203ENST00000382100 POLR1AO95602 1720 aaPredicted RBP10.63□□□□□ -0.71
VLDLR-203ENST00000382100 BCAR3O75815 825 aa10.63□□□□□ -0.71
VLDLR-203ENST00000382100 ESRRAP11474 423 aaPredicted RBP10.63□□□□□ -0.71
VLDLR-203ENST00000382100 TAP1Q03518 808 aa10.63□□□□□ -0.71
VLDLR-203ENST00000382100 DMP1Q13316 513 aaPredicted RBP10.63□□□□□ -0.71
VLDLR-203ENST00000382100 TRMT112Q9UI30 125 aaKnown RBP10.63□□□□□ -0.71
VLDLR-203ENST00000382100 GTPBP6O43824 516 aaPredicted RBP10.63□□□□□ -0.71
VLDLR-203ENST00000382100 CWF19L2Q2TBE0 894 aaKnown RBP10.63□□□□□ -0.71
VLDLR-203ENST00000382100 CROCCP3Q8IVE0 287 aa10.63□□□□□ -0.71
VLDLR-203ENST00000382100 SGSM3Q96HU1 749 aa10.63□□□□□ -0.71
VLDLR-203ENST00000382100 EML4Q9HC35 981 aaKnown RBP10.63□□□□□ -0.71
VLDLR-203ENST00000382100 TUBA3CQ13748 450 aa10.62□□□□□ -0.71
VLDLR-203ENST00000382100 FAM45BPQ6NSW5 357 aa10.62□□□□□ -0.71
VLDLR-203ENST00000382100 TRERF1Q96PN7 1200 aa10.62□□□□□ -0.71
VLDLR-203ENST00000382100 KCNK16Q96T55 309 aa10.62□□□□□ -0.71
VLDLR-203ENST00000382100 POLR3EQ9NVU0 708 aa10.62□□□□□ -0.71
VLDLR-203ENST00000382100 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.62□□□□□ -0.71
VLDLR-203ENST00000382100 YEATS2Q9ULM3 1422 aa10.62□□□□□ -0.71
VLDLR-203ENST00000382100 SFSWAPQ12872 951 aaKnown RBP10.62□□□□□ -0.71
VLDLR-203ENST00000382100 CADPS2Q86UW7 1296 aa10.62□□□□□ -0.71
VLDLR-203ENST00000382100 KIAA2013Q8IYS2 634 aa10.62□□□□□ -0.71
VLDLR-203ENST00000382100 STOML2Q9UJZ1 356 aa10.62□□□□□ -0.71
VLDLR-203ENST00000382100 MTMR7Q9Y216 660 aa10.62□□□□□ -0.71
VLDLR-203ENST00000382100 KIAA0232Q92628 1395 aa10.62□□□□□ -0.71
VLDLR-203ENST00000382100 PITPNM2Q9BZ72 1349 aa10.62□□□□□ -0.71
VLDLR-203ENST00000382100 FKBP3Q00688 224 aaKnown RBP10.62□□□□□ -0.71
VLDLR-203ENST00000382100 PABPC4Q13310 644 aaKnown RBP eCLIP10.62□□□□□ -0.71
VLDLR-203ENST00000382100 TRIM72Q6ZMU5 477 aa10.62□□□□□ -0.71
VLDLR-203ENST00000382100 SCFD1Q8WVM8 642 aa10.62□□□□□ -0.71
VLDLR-203ENST00000382100 STAMQ92783 540 aa10.62□□□□□ -0.71
VLDLR-203ENST00000382100 AASDHPPTQ9NRN7 309 aa10.62□□□□□ -0.71
VLDLR-203ENST00000382100 RBM8AQ9Y5S9 174 aaKnown RBP10.62□□□□□ -0.71
VLDLR-203ENST00000382100 SOX6P35712 828 aa10.62□□□□□ -0.71
VLDLR-203ENST00000382100 CNGA3Q16281 694 aa10.62□□□□□ -0.71
VLDLR-203ENST00000382100 KYAT1Q16773 422 aa10.62□□□□□ -0.71
VLDLR-203ENST00000382100 KSR2Q6VAB6 950 aa10.62□□□□□ -0.71
VLDLR-203ENST00000382100 TMC4Q7Z404 712 aa10.62□□□□□ -0.71
VLDLR-203ENST00000382100 ORC4O43929 436 aa10.62□□□□□ -0.71
VLDLR-203ENST00000382100 KLHL12Q53G59 568 aa10.62□□□□□ -0.71
VLDLR-203ENST00000382100 GPATCH4Q5T3I0 446 aaKnown RBP10.62□□□□□ -0.71
VLDLR-203ENST00000382100 NOSTRINQ8IVI9 506 aa10.62□□□□□ -0.71
VLDLR-203ENST00000382100 IFNL2Q8IZJ0 200 aa10.62□□□□□ -0.71
VLDLR-203ENST00000382100 YIPF3Q9GZM5 350 aa10.62□□□□□ -0.71
VLDLR-203ENST00000382100 ATP8A2Q9NTI2 1148 aa10.62□□□□□ -0.71
VLDLR-203ENST00000382100 ANXA11P50995 505 aaKnown RBP10.62□□□□□ -0.71
VLDLR-203ENST00000382100 NAA20P61599 178 aa10.62□□□□□ -0.71
VLDLR-203ENST00000382100 CALML6Q8TD86 181 aa10.62□□□□□ -0.71
VLDLR-203ENST00000382100 HIC2Q96JB3 615 aa10.62□□□□□ -0.71
VLDLR-203ENST00000382100 NLRP4Q96MN2 994 aa10.62□□□□□ -0.71
VLDLR-203ENST00000382100 EXOC1LA0A1B0GW35 172 aa10.62□□□□□ -0.71
VLDLR-203ENST00000382100 EXOC3O60645 756 aa10.62□□□□□ -0.71
VLDLR-203ENST00000382100 H2AFYO75367 372 aaKnown RBP10.62□□□□□ -0.71
VLDLR-203ENST00000382100 CMA1P23946 247 aa10.62□□□□□ -0.71
VLDLR-203ENST00000382100 CENPPQ6IPU0 288 aa10.62□□□□□ -0.71
VLDLR-203ENST00000382100 CARD9Q9H257 536 aa10.62□□□□□ -0.71
VLDLR-203ENST00000382100 ATP11BQ9Y2G3 1177 aa10.62□□□□□ -0.71
VLDLR-203ENST00000382100 TNPO2O14787 897 aaKnown RBP10.61□□□□□ -0.71
VLDLR-203ENST00000382100 CLASP2O75122 1294 aaKnown RBP10.61□□□□□ -0.71
VLDLR-203ENST00000382100 MYO1DO94832 1006 aa10.61□□□□□ -0.71
VLDLR-203ENST00000382100 AFMP43652 599 aa10.61□□□□□ -0.71
VLDLR-203ENST00000382100 DCAF17Q5H9S7 520 aaPredicted RBP10.61□□□□□ -0.71
VLDLR-203ENST00000382100 NUDCD3Q8IVD9 361 aa10.61□□□□□ -0.71
VLDLR-203ENST00000382100 WWP1Q9H0M0 922 aa10.61□□□□□ -0.71
VLDLR-203ENST00000382100 CPP00450 1065 aa10.61□□□□□ -0.71
VLDLR-203ENST00000382100 MYCNP04198 464 aaPredicted RBP10.61□□□□□ -0.71
VLDLR-203ENST00000382100 BRAFP15056 766 aa10.61□□□□□ -0.71
VLDLR-203ENST00000382100 COG2Q14746 738 aa10.61□□□□□ -0.71
VLDLR-203ENST00000382100 RNF34Q969K3 372 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms