RNA–Protein interactions for RNA: ENST00000381897.5

RFC1-202, Transcript of replication factor C subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFC1, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-202ENST00000381897 E2F5Q15329 346 aa6.21□□□□□ -1.42
RFC1-202ENST00000381897 RPS6KA2Q15349 733 aa6.21□□□□□ -1.42
RFC1-202ENST00000381897 CCDC85BQ15834 202 aaPredicted RBP6.21□□□□□ -1.42
RFC1-202ENST00000381897 USP17L2Q6R6M4 530 aa6.21□□□□□ -1.42
RFC1-202ENST00000381897 TAOK1Q7L7X3 1001 aa6.21□□□□□ -1.42
RFC1-202ENST00000381897 USP17L1Q7RTZ2 530 aa6.21□□□□□ -1.42
RFC1-202ENST00000381897 PASD1Q8IV76 773 aa6.21□□□□□ -1.42
RFC1-202ENST00000381897 RFWD2Q8NHY2 731 aa6.21□□□□□ -1.42
RFC1-202ENST00000381897 NELFBQ8WX92 580 aa6.21□□□□□ -1.42
RFC1-202ENST00000381897 EPSTI1Q96J88 318 aa6.21□□□□□ -1.42
RFC1-202ENST00000381897 RMDN2Q96LZ7 410 aa6.21□□□□□ -1.42
RFC1-202ENST00000381897 PNMA5Q96PV4 448 aa6.21□□□□□ -1.42
RFC1-202ENST00000381897 OSBPL9Q96SU4 736 aa6.21□□□□□ -1.42
RFC1-202ENST00000381897 IFIH1Q9BYX4 1025 aaKnown RBP6.21□□□□□ -1.42
RFC1-202ENST00000381897 NAPBQ9H115 298 aa6.21□□□□□ -1.42
RFC1-202ENST00000381897 IL25Q9H293 177 aa6.21□□□□□ -1.42
RFC1-202ENST00000381897 PRKAB1Q9Y478 270 aa6.21□□□□□ -1.42
RFC1-202ENST00000381897 PPLO60437 1756 aa6.21□□□□□ -1.42
RFC1-202ENST00000381897 LRRIQ3A6PVS8 624 aaPredicted RBP6.21□□□□□ -1.42
RFC1-202ENST00000381897 SPECC1L-ADORA2AF8WAN1 911 aa6.21□□□□□ -1.42
RFC1-202ENST00000381897 C21orf2O43822 256 aa6.21□□□□□ -1.42
RFC1-202ENST00000381897 FLT3P36888 993 aa6.21□□□□□ -1.42
RFC1-202ENST00000381897 PEX19P40855 299 aa6.21□□□□□ -1.42
RFC1-202ENST00000381897 TRAF1Q13077 416 aa6.21□□□□□ -1.42
RFC1-202ENST00000381897 TBX2Q13207 712 aaPredicted RBP6.21□□□□□ -1.42
RFC1-202ENST00000381897 NR1I3Q14994 352 aa6.21□□□□□ -1.42
RFC1-202ENST00000381897 SV2CQ496J9 727 aa6.21□□□□□ -1.42
RFC1-202ENST00000381897 AKAP4Q5JQC9 854 aa6.21□□□□□ -1.42
RFC1-202ENST00000381897 CAPRIN2Q6IMN6 1127 aaKnown RBP6.21□□□□□ -1.42
RFC1-202ENST00000381897 KDM7AQ6ZMT4 941 aa6.21□□□□□ -1.42
RFC1-202ENST00000381897 CHST3Q7LGC8 479 aa6.21□□□□□ -1.42
RFC1-202ENST00000381897 BARD1Q99728 777 aaKnown RBP6.21□□□□□ -1.42
RFC1-202ENST00000381897 HOMER3Q9NSC5 361 aa6.21□□□□□ -1.42
RFC1-202ENST00000381897 COQ3Q9NZJ6 369 aa6.21□□□□□ -1.42
RFC1-202ENST00000381897 RWDD2AQ9UIY3 292 aa6.21□□□□□ -1.42
RFC1-202ENST00000381897 GMNCA6NCL1 334 aa6.2□□□□□ -1.42
RFC1-202ENST00000381897 IQCA1LA6NCM1 817 aa6.2□□□□□ -1.42
RFC1-202ENST00000381897 ITIH3Q06033 890 aa6.2□□□□□ -1.42
RFC1-202ENST00000381897 C2orf54Q08AI8 447 aa6.2□□□□□ -1.42
RFC1-202ENST00000381897 SNX1Q13596 522 aa6.2□□□□□ -1.42
RFC1-202ENST00000381897 NCOA4Q13772 614 aa6.2□□□□□ -1.42
RFC1-202ENST00000381897 NCAPHQ15003 741 aa6.2□□□□□ -1.42
RFC1-202ENST00000381897 LONRF1Q17RB8 773 aa6.2□□□□□ -1.42
RFC1-202ENST00000381897 TTC19Q6DKK2 380 aaPredicted RBP6.2□□□□□ -1.42
RFC1-202ENST00000381897 TEX9Q8N6V9 391 aa6.2□□□□□ -1.42
RFC1-202ENST00000381897 LSM14AQ8ND56 463 aaKnown RBP6.2□□□□□ -1.42
RFC1-202ENST00000381897 SEC62Q99442 399 aaKnown RBP6.2□□□□□ -1.42
RFC1-202ENST00000381897 APOL5Q9BWW9 433 aa6.2□□□□□ -1.42
RFC1-202ENST00000381897 TRIM4Q9C037 500 aa6.2□□□□□ -1.42
RFC1-202ENST00000381897 SLC40A1Q9NP59 571 aa6.2□□□□□ -1.42
RFC1-202ENST00000381897 RPSAP08865 295 aaKnown RBP6.2□□□□□ -1.42
RFC1-202ENST00000381897 RAG1P15918 1043 aa6.2□□□□□ -1.42
RFC1-202ENST00000381897 DYNC1I2Q13409 638 aaKnown RBP6.2□□□□□ -1.42
RFC1-202ENST00000381897 WTAPQ15007 396 aa6.2□□□□□ -1.42
RFC1-202ENST00000381897 CCDC6Q16204 474 aa6.2□□□□□ -1.42
RFC1-202ENST00000381897 FOXR1Q6PIV2 292 aa6.2□□□□□ -1.42
RFC1-202ENST00000381897 DIS3L2Q8IYB7 885 aaKnown RBP6.2□□□□□ -1.42
RFC1-202ENST00000381897 SUCLG2Q96I99 432 aa6.2□□□□□ -1.42
RFC1-202ENST00000381897 CLMNQ96JQ2 1002 aa6.2□□□□□ -1.42
RFC1-202ENST00000381897 ATP6V1G3Q96LB4 118 aa6.2□□□□□ -1.42
RFC1-202ENST00000381897 FAM210AQ96ND0 272 aa6.2□□□□□ -1.42
RFC1-202ENST00000381897 NAP1L3Q99457 506 aaPredicted RBP6.2□□□□□ -1.42
RFC1-202ENST00000381897 EYA1Q99502 592 aa6.2□□□□□ -1.42
RFC1-202ENST00000381897 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.2□□□□□ -1.42
RFC1-202ENST00000381897 ROGDIQ9GZN7 287 aa6.2□□□□□ -1.42
RFC1-202ENST00000381897 ARHGEF28Q8N1W1 1705 aaKnown RBP6.2□□□□□ -1.42
RFC1-202ENST00000381897 MLH3Q9UHC1 1453 aa6.2□□□□□ -1.42
RFC1-202ENST00000381897 SHOX2O60902 331 aaPredicted RBP6.2□□□□□ -1.42
RFC1-202ENST00000381897 WBP4O75554 376 aaKnown RBP6.2□□□□□ -1.42
RFC1-202ENST00000381897 HOXD11P31277 338 aaPredicted RBP6.2□□□□□ -1.42
RFC1-202ENST00000381897 ICA1Q05084 483 aa6.2□□□□□ -1.42
RFC1-202ENST00000381897 ST3GAL1Q11201 340 aa6.2□□□□□ -1.42
RFC1-202ENST00000381897 CUL1Q13616 776 aa6.2□□□□□ -1.42
RFC1-202ENST00000381897 MLC1Q15049 377 aa6.2□□□□□ -1.42
RFC1-202ENST00000381897 LRIG3Q6UXM1 1119 aa6.2□□□□□ -1.42
RFC1-202ENST00000381897 GK5Q6ZS86 529 aa6.2□□□□□ -1.42
RFC1-202ENST00000381897 MMGT1Q8N4V1 131 aa6.2□□□□□ -1.42
RFC1-202ENST00000381897 RNF10Q8N5U6 811 aaKnown RBP6.2□□□□□ -1.42
RFC1-202ENST00000381897 PPFIBP2Q8ND30 876 aa6.2□□□□□ -1.42
RFC1-202ENST00000381897 FOXP1Q9H334 677 aaPredicted RBP6.2□□□□□ -1.42
RFC1-202ENST00000381897 KIF9Q9HAQ2 790 aa6.2□□□□□ -1.42
RFC1-202ENST00000381897 ARHGEF3Q9NR81 526 aa6.2□□□□□ -1.42
RFC1-202ENST00000381897 SAMSN1Q9NSI8 373 aaKnown RBP6.2□□□□□ -1.42
RFC1-202ENST00000381897 MTRF1LQ9UGC7 380 aaKnown RBP6.2□□□□□ -1.42
RFC1-202ENST00000381897 SMIM24O75264 130 aa6.2□□□□□ -1.42
RFC1-202ENST00000381897 RASGRP1O95267 797 aa6.2□□□□□ -1.42
RFC1-202ENST00000381897 FAM107AO95990 144 aa6.2□□□□□ -1.42
RFC1-202ENST00000381897 LDHCP07864 332 aa6.2□□□□□ -1.42
RFC1-202ENST00000381897 EPB41P11171 864 aaKnown RBP6.2□□□□□ -1.42
RFC1-202ENST00000381897 MDH1P40925 334 aaKnown RBP6.2□□□□□ -1.42
RFC1-202ENST00000381897 KCTD16Q68DU8 428 aa6.2□□□□□ -1.42
RFC1-202ENST00000381897 ILDR1Q86SU0 546 aaPredicted RBP6.2□□□□□ -1.42
RFC1-202ENST00000381897 C14orf80Q86SX3 495 aa6.2□□□□□ -1.42
RFC1-202ENST00000381897 CCDC84Q86UT8 332 aaPredicted RBP6.2□□□□□ -1.42
RFC1-202ENST00000381897 TRIML2Q8N7C3 387 aa6.2□□□□□ -1.42
RFC1-202ENST00000381897 MAGEC3Q8TD91 643 aa6.2□□□□□ -1.42
RFC1-202ENST00000381897 SPDL1Q96EA4 605 aa6.2□□□□□ -1.42
RFC1-202ENST00000381897 PAWRQ96IZ0 340 aaKnown RBP6.2□□□□□ -1.42
RFC1-202ENST00000381897 ANKRD27Q96NW4 1050 aa6.2□□□□□ -1.42
RFC1-202ENST00000381897 TSC22D3Q99576 134 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms