RNA–Protein interactions for RNA: ENST00000381578.6

SHOX-203, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SHOX, Length 3,757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-203ENST00000381578 ANKRD20A8PQ5CZ79 823 aa13.29□□□□□ -0.28
SHOX-203ENST00000381578 KRT79Q5XKE5 535 aa13.29□□□□□ -0.28
SHOX-203ENST00000381578 NUGGCQ68CJ6 796 aa13.29□□□□□ -0.28
SHOX-203ENST00000381578 CUL5Q93034 780 aa13.29□□□□□ -0.28
SHOX-203ENST00000381578 IFT74Q96LB3 600 aa13.29□□□□□ -0.28
SHOX-203ENST00000381578 TBK1Q9UHD2 729 aa13.29□□□□□ -0.28
SHOX-203ENST00000381578 PGRMC1O00264 195 aaKnown RBP13.29□□□□□ -0.28
SHOX-203ENST00000381578 EPHB6O15197 1021 aa13.29□□□□□ -0.28
SHOX-203ENST00000381578 ZNF211Q13398 564 aaPredicted RBP13.29□□□□□ -0.28
SHOX-203ENST00000381578 KCNB1Q14721 858 aa13.29□□□□□ -0.28
SHOX-203ENST00000381578 CRYMQ14894 314 aa13.29□□□□□ -0.28
SHOX-203ENST00000381578 MAN2A1Q16706 1144 aa13.29□□□□□ -0.28
SHOX-203ENST00000381578 TLR10Q9BXR5 811 aa13.29□□□□□ -0.28
SHOX-203ENST00000381578 PACSIN1Q9BY11 444 aa13.29□□□□□ -0.28
SHOX-203ENST00000381578 MCM8Q9UJA3 840 aa13.29□□□□□ -0.28
SHOX-203ENST00000381578 SPATA31A1Q5TZJ5 1347 aa13.29□□□□□ -0.28
SHOX-203ENST00000381578 TSPY3P0CV98 308 aa13.28□□□□□ -0.28
SHOX-203ENST00000381578 TSPY8P0CW00 308 aa13.28□□□□□ -0.28
SHOX-203ENST00000381578 VEGFAP15692 232 aaPredicted RBP13.28□□□□□ -0.28
SHOX-203ENST00000381578 SKOR1P84550 965 aa13.28□□□□□ -0.28
SHOX-203ENST00000381578 GLE1Q53GS7 698 aaKnown RBP13.28□□□□□ -0.28
SHOX-203ENST00000381578 CAVIN4Q5BKX8 364 aa13.28□□□□□ -0.28
SHOX-203ENST00000381578 CCDC24Q8N4L8 307 aa13.28□□□□□ -0.28
SHOX-203ENST00000381578 STAG1Q8WVM7 1258 aa13.28□□□□□ -0.28
SHOX-203ENST00000381578 FMO2Q99518 471 aa13.28□□□□□ -0.28
SHOX-203ENST00000381578 TMEM60Q9H2L4 133 aa13.28□□□□□ -0.28
SHOX-203ENST00000381578 AZI2Q9H6S1 392 aa13.28□□□□□ -0.28
SHOX-203ENST00000381578 THRAP3Q9Y2W1 955 aaKnown RBP13.28□□□□□ -0.28
SHOX-203ENST00000381578 PRPF3O43395 683 aaKnown RBP13.28□□□□□ -0.28
SHOX-203ENST00000381578 CHN1P15882 459 aa13.28□□□□□ -0.28
SHOX-203ENST00000381578 TXNRD1Q16881 649 aa13.28□□□□□ -0.28
SHOX-203ENST00000381578 GRIPAP1Q4V328 841 aa13.28□□□□□ -0.28
SHOX-203ENST00000381578 PRCCQ92733 491 aaPredicted RBP13.28□□□□□ -0.28
SHOX-203ENST00000381578 USP21Q9UK80 565 aa13.28□□□□□ -0.28
SHOX-203ENST00000381578 ABCC6O95255 1503 aa13.28□□□□□ -0.28
SHOX-203ENST00000381578 CCNHP51946 323 aaPredicted RBP13.28□□□□□ -0.28
SHOX-203ENST00000381578 TFAP4Q01664 338 aa13.28□□□□□ -0.28
SHOX-203ENST00000381578 FAM47EQ6ZV65 393 aa13.28□□□□□ -0.28
SHOX-203ENST00000381578 LMNTD2Q8IXW0 634 aa13.28□□□□□ -0.28
SHOX-203ENST00000381578 STAG2Q8N3U4 1231 aa13.28□□□□□ -0.28
SHOX-203ENST00000381578 PRMT1Q99873 361 aaKnown RBP13.28□□□□□ -0.28
SHOX-203ENST00000381578 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.28□□□□□ -0.28
SHOX-203ENST00000381578 PDS5AQ29RF7 1337 aaKnown RBP13.28□□□□□ -0.28
SHOX-203ENST00000381578 MAP3K15Q6ZN16 1313 aa13.28□□□□□ -0.28
SHOX-203ENST00000381578 LOC102724428A0A0B4J2F2 783 aa13.27□□□□□ -0.28
SHOX-203ENST00000381578 ZNF263O14978 683 aa13.27□□□□□ -0.28
SHOX-203ENST00000381578 AP1G2O75843 785 aa13.27□□□□□ -0.28
SHOX-203ENST00000381578 FGGP02679 453 aa13.27□□□□□ -0.28
SHOX-203ENST00000381578 SIK1P57059 783 aa13.27□□□□□ -0.28
SHOX-203ENST00000381578 DZIP1Q86YF9 867 aaKnown RBP13.27□□□□□ -0.28
SHOX-203ENST00000381578 IRF2BP1Q8IU81 584 aa13.27□□□□□ -0.28
SHOX-203ENST00000381578 SRBD1Q8N5C6 995 aaKnown RBP13.27□□□□□ -0.28
SHOX-203ENST00000381578 ARHGEF2Q92974 986 aaKnown RBP13.27□□□□□ -0.28
SHOX-203ENST00000381578 RAB34Q9BZG1 259 aa13.27□□□□□ -0.28
SHOX-203ENST00000381578 CCDC87Q9NVE4 849 aa13.27□□□□□ -0.28
SHOX-203ENST00000381578 MTRF1LQ9UGC7 380 aaKnown RBP13.27□□□□□ -0.28
SHOX-203ENST00000381578 KDM3BQ7LBC6 1761 aa13.27□□□□□ -0.28
SHOX-203ENST00000381578 PCCAP05165 728 aaPredicted RBP13.27□□□□□ -0.29
SHOX-203ENST00000381578 ZNF449Q6P9G9 518 aa13.27□□□□□ -0.29
SHOX-203ENST00000381578 CAPN12Q6ZSI9 719 aa13.27□□□□□ -0.29
SHOX-203ENST00000381578 PHF20Q9BVI0 1012 aa13.27□□□□□ -0.29
SHOX-203ENST00000381578 IKQ13123 557 aaPredicted RBP13.27□□□□□ -0.29
SHOX-203ENST00000381578 FAM83BQ5T0W9 1011 aa13.27□□□□□ -0.29
SHOX-203ENST00000381578 PPP4R3AQ6IN85 833 aa13.27□□□□□ -0.29
SHOX-203ENST00000381578 SPDYE1Q8NFV5 336 aaPredicted RBP13.27□□□□□ -0.29
SHOX-203ENST00000381578 OSBPL7Q9BZF2 842 aa13.27□□□□□ -0.29
SHOX-203ENST00000381578 TAOK3Q9H2K8 898 aa13.27□□□□□ -0.29
SHOX-203ENST00000381578 ECT2Q9H8V3 914 aa13.27□□□□□ -0.29
SHOX-203ENST00000381578 WDR19Q8NEZ3 1342 aa13.27□□□□□ -0.29
SHOX-203ENST00000381578 XIRP1Q702N8 1843 aaKnown RBP13.27□□□□□ -0.29
SHOX-203ENST00000381578 ATP6V1G2O95670 118 aa13.26□□□□□ -0.29
SHOX-203ENST00000381578 COL18A1P39060 1754 aa13.26□□□□□ -0.29
SHOX-203ENST00000381578 CTSWP56202 376 aa13.26□□□□□ -0.29
SHOX-203ENST00000381578 HLFQ16534 295 aa13.26□□□□□ -0.29
SHOX-203ENST00000381578 CCDC105Q8IYK2 499 aa13.26□□□□□ -0.29
SHOX-203ENST00000381578 LMBR1Q8WVP7 490 aa13.26□□□□□ -0.29
SHOX-203ENST00000381578 MTRQ99707 1265 aa13.26□□□□□ -0.29
SHOX-203ENST00000381578 JCADQ9P266 1359 aa13.26□□□□□ -0.29
SHOX-203ENST00000381578 CCT8L1PA6NM43 557 aa13.26□□□□□ -0.29
SHOX-203ENST00000381578 DCDC2CA8MYV0 355 aa13.26□□□□□ -0.29
SHOX-203ENST00000381578 OR52Z1P0C646 297 aa13.26□□□□□ -0.29
SHOX-203ENST00000381578 CYP19A1P11511 503 aaPredicted RBP13.26□□□□□ -0.29
SHOX-203ENST00000381578 STX2P32856 288 aa13.26□□□□□ -0.29
SHOX-203ENST00000381578 GJC1P36383 396 aa13.26□□□□□ -0.29
SHOX-203ENST00000381578 EIF6P56537 245 aaKnown RBP13.26□□□□□ -0.29
SHOX-203ENST00000381578 PDXDC2PQ6P474 469 aa13.26□□□□□ -0.29
SHOX-203ENST00000381578 LRRC34Q8IZ02 419 aa13.26□□□□□ -0.29
SHOX-203ENST00000381578 SLC17A8Q8NDX2 589 aa13.26□□□□□ -0.29
SHOX-203ENST00000381578 XPO6Q96QU8 1125 aaKnown RBP13.26□□□□□ -0.29
SHOX-203ENST00000381578 DDX23Q9BUQ8 820 aaKnown RBP13.26□□□□□ -0.29
SHOX-203ENST00000381578 SAP30BPQ9UHR5 308 aaKnown RBP13.26□□□□□ -0.29
SHOX-203ENST00000381578 RASAL2Q9UJF2 1139 aa13.26□□□□□ -0.29
SHOX-203ENST00000381578 SERPINA10Q9UK55 444 aa13.26□□□□□ -0.29
SHOX-203ENST00000381578 LRRC10BA6NIK2 292 aa13.26□□□□□ -0.29
SHOX-203ENST00000381578 ACSL3O95573 720 aa13.26□□□□□ -0.29
SHOX-203ENST00000381578 ZNF131P52739 623 aa13.26□□□□□ -0.29
SHOX-203ENST00000381578 SETDB1Q15047 1291 aa13.26□□□□□ -0.29
SHOX-203ENST00000381578 MUM1Q2TAK8 710 aa13.26□□□□□ -0.29
SHOX-203ENST00000381578 KLHDC7AQ5VTJ3 777 aa13.26□□□□□ -0.29
SHOX-203ENST00000381578 TSC22D3Q99576 134 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms