RNA–Protein interactions for RNA: ENST00000381342.6

SNRPB-201, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNRPB, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-201ENST00000381342 PIK3AP1Q6ZUJ8 805 aa18.4■□□□□ 0.54
SNRPB-201ENST00000381342 FBXO18Q8NFZ0 1043 aa18.4■□□□□ 0.54
SNRPB-201ENST00000381342 JADE2Q9NQC1 790 aa18.4■□□□□ 0.54
SNRPB-201ENST00000381342 TMEM39AQ9NV64 488 aa18.4■□□□□ 0.54
SNRPB-201ENST00000381342 PKD2L1Q9P0L9 805 aa18.4■□□□□ 0.54
SNRPB-201ENST00000381342 KIF3AQ9Y496 699 aa18.4■□□□□ 0.54
SNRPB-201ENST00000381342 DNAH12Q6ZR08 3092 aa18.39■□□□□ 0.54
SNRPB-201ENST00000381342 IGLV3-22A0A075B6J6 115 aa18.39■□□□□ 0.53
SNRPB-201ENST00000381342 EDIL3O43854 480 aa18.39■□□□□ 0.53
SNRPB-201ENST00000381342 RAG1P15918 1043 aa18.39■□□□□ 0.53
SNRPB-201ENST00000381342 CCSAPQ6IQ19 270 aaPredicted RBP18.39■□□□□ 0.53
SNRPB-201ENST00000381342 TOX2Q96NM4 488 aa18.39■□□□□ 0.53
SNRPB-201ENST00000381342 BCAS3Q9H6U6 928 aa18.39■□□□□ 0.53
SNRPB-201ENST00000381342 TDP2O95551 362 aa18.38■□□□□ 0.53
SNRPB-201ENST00000381342 ARP10275 920 aa18.38■□□□□ 0.53
SNRPB-201ENST00000381342 TGFB3P10600 412 aa18.38■□□□□ 0.53
SNRPB-201ENST00000381342 KCNA2P16389 499 aa18.38■□□□□ 0.53
SNRPB-201ENST00000381342 CPT1AP50416 773 aa18.38■□□□□ 0.53
SNRPB-201ENST00000381342 NKX3-2P78367 333 aa18.38■□□□□ 0.53
SNRPB-201ENST00000381342 SAFBQ15424 915 aaKnown RBP eCLIP18.38■□□□□ 0.53
SNRPB-201ENST00000381342 CELF3Q5SZQ8 465 aaKnown RBP18.38■□□□□ 0.53
SNRPB-201ENST00000381342 PLA2G4DQ86XP0 818 aa18.38■□□□□ 0.53
SNRPB-201ENST00000381342 DHX37Q8IY37 1157 aaKnown RBP18.38■□□□□ 0.53
SNRPB-201ENST00000381342 AFG1LQ8WV93 481 aa18.38■□□□□ 0.53
SNRPB-201ENST00000381342 CDHR1Q96JP9 859 aa18.38■□□□□ 0.53
SNRPB-201ENST00000381342 SEZ6LQ9BYH1 1024 aa18.38■□□□□ 0.53
SNRPB-201ENST00000381342 PDLIM7Q9NR12 457 aa18.38■□□□□ 0.53
SNRPB-201ENST00000381342 KCNH7Q9NS40 1196 aa18.38■□□□□ 0.53
SNRPB-201ENST00000381342 POLR3EQ9NVU0 708 aa18.38■□□□□ 0.53
SNRPB-201ENST00000381342 ARVCFO00192 962 aa18.37■□□□□ 0.53
SNRPB-201ENST00000381342 MEIS1O00470 390 aa18.37■□□□□ 0.53
SNRPB-201ENST00000381342 ATP9AO75110 1047 aa18.37■□□□□ 0.53
SNRPB-201ENST00000381342 CIITAP33076 1130 aa18.37■□□□□ 0.53
SNRPB-201ENST00000381342 PRR16Q569H4 304 aa18.37■□□□□ 0.53
SNRPB-201ENST00000381342 MYSM1Q5VVJ2 828 aa18.37■□□□□ 0.53
SNRPB-201ENST00000381342 CYFIP1Q7L576 1253 aa18.37■□□□□ 0.53
SNRPB-201ENST00000381342 NIPA1Q7RTP0 329 aa18.37■□□□□ 0.53
SNRPB-201ENST00000381342 ANKRD33Q7Z3H0 272 aa18.37■□□□□ 0.53
SNRPB-201ENST00000381342 EMID1Q96A84 441 aaPredicted RBP18.37■□□□□ 0.53
SNRPB-201ENST00000381342 UIMC1Q96RL1 719 aa18.37■□□□□ 0.53
SNRPB-201ENST00000381342 A6NJR5 290 aa18.36■□□□□ 0.53
SNRPB-201ENST00000381342 KIF28PB7ZC32 967 aa18.36■□□□□ 0.53
SNRPB-201ENST00000381342 MMP3P08254 477 aa18.36■□□□□ 0.53
SNRPB-201ENST00000381342 USP11P51784 963 aa18.36■□□□□ 0.53
SNRPB-201ENST00000381342 SETQ01105 290 aaPredicted RBP18.36■□□□□ 0.53
SNRPB-201ENST00000381342 SP4Q02446 784 aa18.36■□□□□ 0.53
SNRPB-201ENST00000381342 LETM2Q2VYF4 491 aa18.36■□□□□ 0.53
SNRPB-201ENST00000381342 CXCL17Q6UXB2 119 aa18.36■□□□□ 0.53
SNRPB-201ENST00000381342 NEK8Q86SG6 692 aa18.36■□□□□ 0.53
SNRPB-201ENST00000381342 BADQ92934 168 aa18.36■□□□□ 0.53
SNRPB-201ENST00000381342 LENG9Q96B70 501 aa18.36■□□□□ 0.53
SNRPB-201ENST00000381342 INTS4Q96HW7 963 aaKnown RBP18.36■□□□□ 0.53
SNRPB-201ENST00000381342 SPATA33Q96N06 139 aa18.36■□□□□ 0.53
SNRPB-201ENST00000381342 MLXIPQ9HAP2 919 aa18.36■□□□□ 0.53
SNRPB-201ENST00000381342 AGO4Q9HCK5 861 aaKnown RBP18.36■□□□□ 0.53
SNRPB-201ENST00000381342 TELO2Q9Y4R8 837 aa18.36■□□□□ 0.53
SNRPB-201ENST00000381342 TRIM43BA6NCK2 446 aa18.35■□□□□ 0.53
SNRPB-201ENST00000381342 MYL3P08590 195 aa18.35■□□□□ 0.53
SNRPB-201ENST00000381342 ITGB3BPQ13352 177 aaPredicted RBP18.35■□□□□ 0.53
SNRPB-201ENST00000381342 LAMC2Q13753 1193 aa18.35■□□□□ 0.53
SNRPB-201ENST00000381342 GNL2Q13823 731 aaKnown RBP18.35■□□□□ 0.53
SNRPB-201ENST00000381342 NEDD9Q14511 834 aa18.35■□□□□ 0.53
SNRPB-201ENST00000381342 HSDL1Q3SXM5 330 aa18.35■□□□□ 0.53
SNRPB-201ENST00000381342 METTL7BQ6UX53 244 aa18.35■□□□□ 0.53
SNRPB-201ENST00000381342 SH3RF1Q7Z6J0 888 aa18.35■□□□□ 0.53
SNRPB-201ENST00000381342 PPTC7Q8NI37 304 aa18.35■□□□□ 0.53
SNRPB-201ENST00000381342 TRIM43Q96BQ3 446 aaPredicted RBP18.35■□□□□ 0.53
SNRPB-201ENST00000381342 SENP7Q9BQF6 1050 aa18.35■□□□□ 0.53
SNRPB-201ENST00000381342 FOXP1Q9H334 677 aaPredicted RBP18.35■□□□□ 0.53
SNRPB-201ENST00000381342 TRIOBPQ9H2D6 2365 aa18.35■□□□□ 0.53
SNRPB-201ENST00000381342 SCN10AQ9Y5Y9 1956 aa18.35■□□□□ 0.53
SNRPB-201ENST00000381342 H3BQV1 296 aa18.34■□□□□ 0.53
SNRPB-201ENST00000381342 KIAA0355O15063 1070 aa18.34■□□□□ 0.53
SNRPB-201ENST00000381342 SLC37A4O43826 429 aa18.34■□□□□ 0.53
SNRPB-201ENST00000381342 KPNA6O60684 536 aa18.34■□□□□ 0.53
SNRPB-201ENST00000381342 FAAP100Q0VG06 881 aa18.34■□□□□ 0.53
SNRPB-201ENST00000381342 ITGA7Q13683 1181 aa18.34■□□□□ 0.53
SNRPB-201ENST00000381342 LRIT3Q3SXY7 679 aa18.34■□□□□ 0.53
SNRPB-201ENST00000381342 WDR81Q562E7 1941 aa18.33■□□□□ 0.53
SNRPB-201ENST00000381342 CYP3A7-CYP3A51PA0A087WV96 503 aa18.33■□□□□ 0.52
SNRPB-201ENST00000381342 DDX39AO00148 427 aaKnown RBP18.33■□□□□ 0.52
SNRPB-201ENST00000381342 NOP56O00567 594 aaKnown RBP18.33■□□□□ 0.52
SNRPB-201ENST00000381342 WNT7AO00755 349 aa18.33■□□□□ 0.52
SNRPB-201ENST00000381342 MAFGO15525 162 aa18.33■□□□□ 0.52
SNRPB-201ENST00000381342 CCNT1O60563 726 aaKnown RBP18.33■□□□□ 0.52
SNRPB-201ENST00000381342 ZNF286BP0CG31 522 aa18.33■□□□□ 0.52
SNRPB-201ENST00000381342 CYP3A7P24462 503 aa18.33■□□□□ 0.52
SNRPB-201ENST00000381342 CDK7P50613 346 aa18.33■□□□□ 0.52
SNRPB-201ENST00000381342 PURAQ00577 322 aaKnown RBP18.33■□□□□ 0.52
SNRPB-201ENST00000381342 LARP1BQ659C4 914 aaKnown RBP18.33■□□□□ 0.52
SNRPB-201ENST00000381342 MCTP1Q6DN14 999 aa18.33■□□□□ 0.52
SNRPB-201ENST00000381342 MOXD1Q6UVY6 613 aa18.33■□□□□ 0.52
SNRPB-201ENST00000381342 NOSTRINQ8IVI9 506 aa18.33■□□□□ 0.52
SNRPB-201ENST00000381342 GIMAP8Q8ND71 665 aaPredicted RBP18.33■□□□□ 0.52
SNRPB-201ENST00000381342 MBOAT7Q96N66 472 aa18.33■□□□□ 0.52
SNRPB-201ENST00000381342 ZNF577Q9BSK1 485 aa18.33■□□□□ 0.52
SNRPB-201ENST00000381342 DDX25Q9UHL0 483 aaKnown RBP18.33■□□□□ 0.52
SNRPB-201ENST00000381342 NFASCO94856 1347 aa18.32■□□□□ 0.52
SNRPB-201ENST00000381342 VPS37CA5D8V6 355 aaPredicted RBP18.32■□□□□ 0.52
SNRPB-201ENST00000381342 IPO5O00410 1097 aaKnown RBP18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms