RNA–Protein interactions for RNA: ENST00000381037.4

CDPF1-202, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

TSL 1 (best)

Gene CDPF1, Length 1,600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-202ENST00000381037 TDP2O95551 362 aa22.69■■□□□ 1.22
CDPF1-202ENST00000381037 PURAQ00577 322 aaKnown RBP22.69■■□□□ 1.22
CDPF1-202ENST00000381037 SETQ01105 290 aaPredicted RBP22.69■■□□□ 1.22
CDPF1-202ENST00000381037 Q4G0T1 1027 aa22.69■■□□□ 1.22
CDPF1-202ENST00000381037 PRR16Q569H4 304 aa22.69■■□□□ 1.22
CDPF1-202ENST00000381037 PPP4R3AQ6IN85 833 aa22.69■■□□□ 1.22
CDPF1-202ENST00000381037 CXCL17Q6UXB2 119 aa22.69■■□□□ 1.22
CDPF1-202ENST00000381037 SPATA33Q96N06 139 aa22.69■■□□□ 1.22
CDPF1-202ENST00000381037 MLXIPQ9HAP2 919 aa22.69■■□□□ 1.22
CDPF1-202ENST00000381037 SORBS3O60504 671 aa22.68■■□□□ 1.22
CDPF1-202ENST00000381037 NFASCO94856 1347 aa22.68■■□□□ 1.22
CDPF1-202ENST00000381037 ELP1O95163 1332 aa22.68■■□□□ 1.22
CDPF1-202ENST00000381037 ZEB2O60315 1214 aa22.68■■□□□ 1.22
CDPF1-202ENST00000381037 PPFIA4O75335 1185 aa22.68■■□□□ 1.22
CDPF1-202ENST00000381037 SNX17Q15036 470 aa22.68■■□□□ 1.22
CDPF1-202ENST00000381037 LETM2Q2VYF4 491 aa22.68■■□□□ 1.22
CDPF1-202ENST00000381037 BRDTQ58F21 947 aaPredicted RBP22.68■■□□□ 1.22
CDPF1-202ENST00000381037 LARP1BQ659C4 914 aaKnown RBP22.68■■□□□ 1.22
CDPF1-202ENST00000381037 GPR20Q99678 358 aa22.68■■□□□ 1.22
CDPF1-202ENST00000381037 POLR3EQ9NVU0 708 aa22.68■■□□□ 1.22
CDPF1-202ENST00000381037 PKD2L1Q9P0L9 805 aa22.68■■□□□ 1.22
CDPF1-202ENST00000381037 IPO5O00410 1097 aaKnown RBP22.67■■□□□ 1.22
CDPF1-202ENST00000381037 KPNA6O60684 536 aa22.67■■□□□ 1.22
CDPF1-202ENST00000381037 C1orf53Q5VUE5 145 aa22.67■■□□□ 1.22
CDPF1-202ENST00000381037 SLC39A5Q6ZMH5 540 aa22.67■■□□□ 1.22
CDPF1-202ENST00000381037 NOSTRINQ8IVI9 506 aa22.67■■□□□ 1.22
CDPF1-202ENST00000381037 GLT1D1Q96MS3 346 aa22.67■■□□□ 1.22
CDPF1-202ENST00000381037 GRIN2DO15399 1336 aa22.67■■□□□ 1.22
CDPF1-202ENST00000381037 WNT7AO00755 349 aa22.66■■□□□ 1.22
CDPF1-202ENST00000381037 MSH4O15457 936 aa22.66■■□□□ 1.22
CDPF1-202ENST00000381037 CABYRO75952 493 aa22.66■■□□□ 1.22
CDPF1-202ENST00000381037 DGKDQ16760 1214 aa22.66■■□□□ 1.22
CDPF1-202ENST00000381037 DOCK5Q9H7D0 1870 aa22.65■■□□□ 1.22
CDPF1-202ENST00000381037 SLC37A4O43826 429 aa22.65■■□□□ 1.22
CDPF1-202ENST00000381037 GCFC2P16383 781 aaKnown RBP22.65■■□□□ 1.22
CDPF1-202ENST00000381037 LRRC26Q2I0M4 334 aa22.65■■□□□ 1.22
CDPF1-202ENST00000381037 SLC43A3Q8NBI5 491 aa22.65■■□□□ 1.22
CDPF1-202ENST00000381037 KAT2BQ92831 832 aa22.65■■□□□ 1.22
CDPF1-202ENST00000381037 SLC5A5Q92911 643 aa22.65■■□□□ 1.22
CDPF1-202ENST00000381037 ZNF577Q9BSK1 485 aa22.65■■□□□ 1.22
CDPF1-202ENST00000381037 STARD7Q9NQZ5 370 aa22.65■■□□□ 1.22
CDPF1-202ENST00000381037 FOXD4L1Q9NU39 408 aa22.65■■□□□ 1.22
CDPF1-202ENST00000381037 DDX25Q9UHL0 483 aaKnown RBP22.65■■□□□ 1.22
CDPF1-202ENST00000381037 GSTTP1A0A1W2PQM5 241 aa22.64■■□□□ 1.22
CDPF1-202ENST00000381037 MYL3P08590 195 aa22.64■■□□□ 1.22
CDPF1-202ENST00000381037 CDK7P50613 346 aa22.64■■□□□ 1.22
CDPF1-202ENST00000381037 ETNPPLQ8TBG4 499 aa22.64■■□□□ 1.22
CDPF1-202ENST00000381037 UIMC1Q96RL1 719 aa22.64■■□□□ 1.22
CDPF1-202ENST00000381037 C16orf70Q9BSU1 422 aa22.64■■□□□ 1.22
CDPF1-202ENST00000381037 MTG1Q9BT17 334 aaPredicted RBP22.64■■□□□ 1.22
CDPF1-202ENST00000381037 JPH1Q9HDC5 661 aaPredicted RBP22.64■■□□□ 1.22
CDPF1-202ENST00000381037 KCNMB3Q9NPA1 279 aa22.64■■□□□ 1.22
CDPF1-202ENST00000381037 TBC1D22BQ9NU19 505 aa22.64■■□□□ 1.22
CDPF1-202ENST00000381037 CCNT1O60563 726 aaKnown RBP22.64■■□□□ 1.21
CDPF1-202ENST00000381037 CCNE2O96020 404 aa22.64■■□□□ 1.21
CDPF1-202ENST00000381037 ATN1P54259 1190 aaPredicted RBP22.64■■□□□ 1.21
CDPF1-202ENST00000381037 NAP1L4Q99733 375 aaKnown RBP22.64■■□□□ 1.21
CDPF1-202ENST00000381037 SDF4Q9BRK5 362 aa22.64■■□□□ 1.21
CDPF1-202ENST00000381037 SLC9A2Q9UBY0 812 aa22.64■■□□□ 1.21
CDPF1-202ENST00000381037 H3BQV1 296 aa22.63■■□□□ 1.21
CDPF1-202ENST00000381037 ATG7O95352 703 aa22.63■■□□□ 1.21
CDPF1-202ENST00000381037 F2P00734 622 aa22.63■■□□□ 1.21
CDPF1-202ENST00000381037 PDCP20941 246 aa22.63■■□□□ 1.21
CDPF1-202ENST00000381037 SYT1P21579 422 aa22.63■■□□□ 1.21
CDPF1-202ENST00000381037 RIT2Q99578 217 aa22.63■■□□□ 1.21
CDPF1-202ENST00000381037 HTATIP2Q9BUP3 242 aa22.63■■□□□ 1.21
CDPF1-202ENST00000381037 SCN10AQ9Y5Y9 1956 aa22.63■■□□□ 1.21
CDPF1-202ENST00000381037 HAS3O00219 553 aa22.62■■□□□ 1.21
CDPF1-202ENST00000381037 NOP56O00567 594 aaKnown RBP22.62■■□□□ 1.21
CDPF1-202ENST00000381037 PSMD10O75832 226 aa22.62■■□□□ 1.21
CDPF1-202ENST00000381037 PSMC6P62333 389 aa22.62■■□□□ 1.21
CDPF1-202ENST00000381037 SP4Q02446 784 aa22.62■■□□□ 1.21
CDPF1-202ENST00000381037 MLLT1Q03111 559 aaPredicted RBP22.62■■□□□ 1.21
CDPF1-202ENST00000381037 B3GNT9Q6UX72 402 aa22.62■■□□□ 1.21
CDPF1-202ENST00000381037 SEPT1Q8WYJ6 367 aa22.62■■□□□ 1.21
CDPF1-202ENST00000381037 HAS1Q92839 578 aa22.62■■□□□ 1.21
CDPF1-202ENST00000381037 GJA10Q969M2 543 aa22.62■■□□□ 1.21
CDPF1-202ENST00000381037 ZNF286BP0CG31 522 aa22.61■■□□□ 1.21
CDPF1-202ENST00000381037 TOB1P50616 345 aaPredicted RBP22.61■■□□□ 1.21
CDPF1-202ENST00000381037 ACTR2P61160 394 aa22.61■■□□□ 1.21
CDPF1-202ENST00000381037 ALPK3Q96L96 1907 aa22.61■■□□□ 1.21
CDPF1-202ENST00000381037 A0A0U1RQG5 324 aaPredicted RBP22.6■■□□□ 1.21
CDPF1-202ENST00000381037 ARVCFO00192 962 aa22.6■■□□□ 1.21
CDPF1-202ENST00000381037 LGALS2P05162 132 aa22.6■■□□□ 1.21
CDPF1-202ENST00000381037 TCF7P36402 384 aaPredicted RBP22.6■■□□□ 1.21
CDPF1-202ENST00000381037 TRAPPC10P48553 1259 aa22.6■■□□□ 1.21
CDPF1-202ENST00000381037 ITGA7Q13683 1181 aa22.6■■□□□ 1.21
CDPF1-202ENST00000381037 GNL2Q13823 731 aaKnown RBP22.6■■□□□ 1.21
CDPF1-202ENST00000381037 POTEDQ86YR6 584 aa22.6■■□□□ 1.21
CDPF1-202ENST00000381037 PCYT2Q99447 389 aa22.6■■□□□ 1.21
CDPF1-202ENST00000381037 TBX3O15119 743 aa22.6■■□□□ 1.21
CDPF1-202ENST00000381037 MCTP1Q6DN14 999 aa22.6■■□□□ 1.21
CDPF1-202ENST00000381037 ABHD15Q6UXT9 468 aa22.6■■□□□ 1.21
CDPF1-202ENST00000381037 ANKRD33Q7Z3H0 272 aa22.6■■□□□ 1.21
CDPF1-202ENST00000381037 VTI1AQ96AJ9 217 aa22.6■■□□□ 1.21
CDPF1-202ENST00000381037 FAM20AQ96MK3 541 aa22.6■■□□□ 1.21
CDPF1-202ENST00000381037 PDE4DIPQ5VU43 2346 aa22.59■■□□□ 1.21
CDPF1-202ENST00000381037 IGKV6D-21A0A0A0MT36 114 aa22.59■■□□□ 1.21
CDPF1-202ENST00000381037 DDX39AO00148 427 aaKnown RBP22.59■■□□□ 1.21
CDPF1-202ENST00000381037 LGR5O75473 907 aa22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms