RNA–Protein interactions for RNA: ENST00000380833.8

CLCN4-202, Transcript of chloride voltage-gated channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN4, Length 6,750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-202ENST00000380833 DCAF5Q96JK2 942 aa11.64□□□□□ -0.55
CLCN4-202ENST00000380833 PDE8AO60658 829 aa11.63□□□□□ -0.55
CLCN4-202ENST00000380833 DCTN3O75935 186 aa11.63□□□□□ -0.55
CLCN4-202ENST00000380833 TYW1BQ6NUM6 668 aa11.63□□□□□ -0.55
CLCN4-202ENST00000380833 MRPL50Q8N5N7 158 aaKnown RBP11.63□□□□□ -0.55
CLCN4-202ENST00000380833 PPWD1Q96BP3 646 aaKnown RBP11.63□□□□□ -0.55
CLCN4-202ENST00000380833 IL17RAQ96F46 866 aa11.63□□□□□ -0.55
CLCN4-202ENST00000380833 CATSPER2Q96P56 530 aa11.63□□□□□ -0.55
CLCN4-202ENST00000380833 ZNF608Q9ULD9 1512 aaPredicted RBP11.63□□□□□ -0.55
CLCN4-202ENST00000380833 SH3TC1Q8TE82 1336 aa11.63□□□□□ -0.55
CLCN4-202ENST00000380833 ZNF532Q9HCE3 1301 aa11.63□□□□□ -0.55
CLCN4-202ENST00000380833 CCND1P24385 295 aa11.63□□□□□ -0.55
CLCN4-202ENST00000380833 IFNAR2P48551 515 aa11.63□□□□□ -0.55
CLCN4-202ENST00000380833 POLGP54098 1239 aaPredicted RBP11.63□□□□□ -0.55
CLCN4-202ENST00000380833 MTX1Q13505 466 aa11.63□□□□□ -0.55
CLCN4-202ENST00000380833 TRIM16LQ309B1 348 aa11.63□□□□□ -0.55
CLCN4-202ENST00000380833 ELMSAN1Q6PJG2 1045 aa11.63□□□□□ -0.55
CLCN4-202ENST00000380833 ANO5Q75V66 913 aa11.63□□□□□ -0.55
CLCN4-202ENST00000380833 CDH24Q86UP0 819 aa11.63□□□□□ -0.55
CLCN4-202ENST00000380833 TRIM56Q9BRZ2 755 aaKnown RBP11.63□□□□□ -0.55
CLCN4-202ENST00000380833 NRDE2Q9H7Z3 1164 aa11.63□□□□□ -0.55
CLCN4-202ENST00000380833 SYBUQ9NX95 663 aa11.63□□□□□ -0.55
CLCN4-202ENST00000380833 GDF11O95390 407 aa11.63□□□□□ -0.55
CLCN4-202ENST00000380833 EIF2B2P49770 351 aaKnown RBP11.63□□□□□ -0.55
CLCN4-202ENST00000380833 TTC38Q5R3I4 469 aa11.63□□□□□ -0.55
CLCN4-202ENST00000380833 RSRC2Q7L4I2 434 aaKnown RBP11.63□□□□□ -0.55
CLCN4-202ENST00000380833 ICA1LQ8NDH6 482 aa11.63□□□□□ -0.55
CLCN4-202ENST00000380833 CALML6Q8TD86 181 aa11.63□□□□□ -0.55
CLCN4-202ENST00000380833 U2AF1L4Q8WU68 220 aaKnown RBP11.63□□□□□ -0.55
CLCN4-202ENST00000380833 PGBD1Q96JS3 809 aa11.63□□□□□ -0.55
CLCN4-202ENST00000380833 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.63□□□□□ -0.55
CLCN4-202ENST00000380833 SUCLA2Q9P2R7 463 aaPredicted RBP11.63□□□□□ -0.55
CLCN4-202ENST00000380833 STAM2O75886 525 aa11.63□□□□□ -0.55
CLCN4-202ENST00000380833 ARHGAP4P98171 946 aa11.63□□□□□ -0.55
CLCN4-202ENST00000380833 RILPL1Q5EBL4 403 aa11.63□□□□□ -0.55
CLCN4-202ENST00000380833 DHX32Q7L7V1 743 aaKnown RBP11.63□□□□□ -0.55
CLCN4-202ENST00000380833 EDC3Q96F86 508 aaKnown RBP11.63□□□□□ -0.55
CLCN4-202ENST00000380833 EHD2Q9NZN4 543 aa11.63□□□□□ -0.55
CLCN4-202ENST00000380833 SCRN1Q12765 414 aa11.63□□□□□ -0.55
CLCN4-202ENST00000380833 CNNM4Q6P4Q7 775 aa11.63□□□□□ -0.55
CLCN4-202ENST00000380833 NLRP9Q7RTR0 991 aa11.63□□□□□ -0.55
CLCN4-202ENST00000380833 CABP7Q86V35 215 aa11.63□□□□□ -0.55
CLCN4-202ENST00000380833 OLFML3Q9NRN5 406 aa11.63□□□□□ -0.55
CLCN4-202ENST00000380833 PSD3Q9NYI0 1048 aa11.63□□□□□ -0.55
CLCN4-202ENST00000380833 WARS2Q9UGM6 360 aaKnown RBP11.63□□□□□ -0.55
CLCN4-202ENST00000380833 CARD8Q9Y2G2 431 aa11.63□□□□□ -0.55
CLCN4-202ENST00000380833 URB2Q14146 1524 aaKnown RBP11.63□□□□□ -0.55
CLCN4-202ENST00000380833 HOXC9P31274 260 aa11.62□□□□□ -0.55
CLCN4-202ENST00000380833 RCN1Q15293 331 aa11.62□□□□□ -0.55
CLCN4-202ENST00000380833 VWA3BQ502W6 1294 aa11.62□□□□□ -0.55
CLCN4-202ENST00000380833 SPATA5Q8NB90 893 aa11.62□□□□□ -0.55
CLCN4-202ENST00000380833 ECT2Q9H8V3 914 aa11.62□□□□□ -0.55
CLCN4-202ENST00000380833 HAUS2Q9NVX0 235 aa11.62□□□□□ -0.55
CLCN4-202ENST00000380833 IBTKQ9P2D0 1353 aaPredicted RBP11.62□□□□□ -0.55
CLCN4-202ENST00000380833 TMOD1P28289 359 aa11.62□□□□□ -0.55
CLCN4-202ENST00000380833 ANGPT1Q15389 498 aa11.62□□□□□ -0.55
CLCN4-202ENST00000380833 PPP2R5EQ16537 467 aa11.62□□□□□ -0.55
CLCN4-202ENST00000380833 CC2D1AQ6P1N0 951 aaPredicted RBP11.62□□□□□ -0.55
CLCN4-202ENST00000380833 TRIM74Q86UV6 250 aa11.62□□□□□ -0.55
CLCN4-202ENST00000380833 TRIM73Q86UV7 250 aa11.62□□□□□ -0.55
CLCN4-202ENST00000380833 SYCE1Q8N0S2 351 aa11.62□□□□□ -0.55
CLCN4-202ENST00000380833 SUPT20HQ8NEM7 779 aa11.62□□□□□ -0.55
CLCN4-202ENST00000380833 MAIP1Q8WWC4 291 aa11.62□□□□□ -0.55
CLCN4-202ENST00000380833 LSM14BQ9BX40 385 aaKnown RBP11.62□□□□□ -0.55
CLCN4-202ENST00000380833 C19orf44Q9H6X5 657 aa11.62□□□□□ -0.55
CLCN4-202ENST00000380833 AS3MTQ9HBK9 375 aa11.62□□□□□ -0.55
CLCN4-202ENST00000380833 MAD1L1Q9Y6D9 718 aa11.62□□□□□ -0.55
CLCN4-202ENST00000380833 JADE1Q6IE81 842 aa11.62□□□□□ -0.55
CLCN4-202ENST00000380833 C7orf31Q8N865 590 aa11.62□□□□□ -0.55
CLCN4-202ENST00000380833 ABCB6Q9NP58 842 aa11.62□□□□□ -0.55
CLCN4-202ENST00000380833 FBXO9Q9UK97 447 aaPredicted RBP11.62□□□□□ -0.55
CLCN4-202ENST00000380833 ABCC11Q96J66 1382 aa11.62□□□□□ -0.55
CLCN4-202ENST00000380833 ALDH1B1P30837 517 aa11.62□□□□□ -0.55
CLCN4-202ENST00000380833 KIF11P52732 1056 aa11.62□□□□□ -0.55
CLCN4-202ENST00000380833 TUBA3CQ13748 450 aa11.62□□□□□ -0.55
CLCN4-202ENST00000380833 RPS6KA1Q15418 735 aa11.62□□□□□ -0.55
CLCN4-202ENST00000380833 HDDC2Q7Z4H3 204 aa11.62□□□□□ -0.55
CLCN4-202ENST00000380833 ERBB4Q15303 1308 aa11.62□□□□□ -0.55
CLCN4-202ENST00000380833 FOSL2P15408 326 aa11.62□□□□□ -0.55
CLCN4-202ENST00000380833 RXRBP28702 533 aa11.62□□□□□ -0.55
CLCN4-202ENST00000380833 NLRP12P59046 1061 aa11.62□□□□□ -0.55
CLCN4-202ENST00000380833 ZNF280DQ6N043 979 aa11.62□□□□□ -0.55
CLCN4-202ENST00000380833 IFT122Q9HBG6 1241 aa11.62□□□□□ -0.55
CLCN4-202ENST00000380833 CD248Q9HCU0 757 aa11.62□□□□□ -0.55
CLCN4-202ENST00000380833 FAM8A1Q9UBU6 413 aa11.62□□□□□ -0.55
CLCN4-202ENST00000380833 STRIP2Q9ULQ0 834 aa11.62□□□□□ -0.55
CLCN4-202ENST00000380833 SYNRGQ9UMZ2 1314 aa11.62□□□□□ -0.55
CLCN4-202ENST00000380833 ARHGEF18Q6ZSZ5 1173 aa11.62□□□□□ -0.55
CLCN4-202ENST00000380833 NUDCD1Q96RS6 583 aa11.62□□□□□ -0.55
CLCN4-202ENST00000380833 MMADHCQ9H3L0 296 aaPredicted RBP11.62□□□□□ -0.55
CLCN4-202ENST00000380833 SMCO2A6NFE2 343 aa11.61□□□□□ -0.55
CLCN4-202ENST00000380833 PCP4L1A6NKN8 68 aa11.61□□□□□ -0.55
CLCN4-202ENST00000380833 BUB1O43683 1085 aa11.61□□□□□ -0.55
CLCN4-202ENST00000380833 KRT76Q01546 638 aa11.61□□□□□ -0.55
CLCN4-202ENST00000380833 SERPINI1Q99574 410 aa11.61□□□□□ -0.55
CLCN4-202ENST00000380833 SLF1Q9BQI6 1058 aa11.61□□□□□ -0.55
CLCN4-202ENST00000380833 NDE1Q9NXR1 346 aa11.61□□□□□ -0.55
CLCN4-202ENST00000380833 R3HDM2Q9Y2K5 976 aaKnown RBP11.61□□□□□ -0.55
CLCN4-202ENST00000380833 PCDHB15Q9Y5E8 787 aa11.61□□□□□ -0.55
CLCN4-202ENST00000380833 ARAP1Q96P48 1450 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms