RNA–Protein interactions for RNA: ENST00000380107.5

TRIM6-203, Transcript of tripartite motif containing 6, humanhuman

TSL 1 (best) BASIC

Gene TRIM6, Length 2,590 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-203ENST00000380107 RAD51CO43502 376 aa9.61□□□□□ -0.87
TRIM6-203ENST00000380107 PPP1R11O60927 126 aaPredicted RBP9.61□□□□□ -0.87
TRIM6-203ENST00000380107 PRLRP16471 622 aa9.61□□□□□ -0.87
TRIM6-203ENST00000380107 ADCY7P51828 1080 aa9.61□□□□□ -0.87
TRIM6-203ENST00000380107 CFAP58Q5T655 872 aa9.61□□□□□ -0.87
TRIM6-203ENST00000380107 EMBQ6PCB8 327 aa9.61□□□□□ -0.87
TRIM6-203ENST00000380107 POTEBQ6S5H4 581 aa9.61□□□□□ -0.87
TRIM6-203ENST00000380107 TPTE2Q6XPS3 522 aa9.61□□□□□ -0.87
TRIM6-203ENST00000380107 C16orf86Q6ZW13 317 aa9.61□□□□□ -0.87
TRIM6-203ENST00000380107 ZNF572Q7Z3I7 529 aaPredicted RBP9.61□□□□□ -0.87
TRIM6-203ENST00000380107 EFCAB13Q8IY85 973 aa9.61□□□□□ -0.87
TRIM6-203ENST00000380107 NEDD1Q8NHV4 660 aa9.61□□□□□ -0.87
TRIM6-203ENST00000380107 PIK3R5Q8WYR1 880 aa9.61□□□□□ -0.87
TRIM6-203ENST00000380107 HAS1Q92839 578 aa9.61□□□□□ -0.87
TRIM6-203ENST00000380107 TSG101Q99816 390 aa9.61□□□□□ -0.87
TRIM6-203ENST00000380107 AP1M1Q9BXS5 423 aa9.61□□□□□ -0.87
TRIM6-203ENST00000380107 KIAA1024Q9UPX6 916 aa9.61□□□□□ -0.87
TRIM6-203ENST00000380107 COL14A1Q05707 1796 aaKnown RBP9.61□□□□□ -0.87
TRIM6-203ENST00000380107 ROBO3Q96MS0 1386 aa9.61□□□□□ -0.87
TRIM6-203ENST00000380107 CDK5RAP2Q96SN8 1893 aa9.61□□□□□ -0.87
TRIM6-203ENST00000380107 PVALEFA0A1B0GWK0 134 aa9.61□□□□□ -0.87
TRIM6-203ENST00000380107 SHTN1A0MZ66 631 aa9.61□□□□□ -0.87
TRIM6-203ENST00000380107 KCNK3O14649 394 aa9.61□□□□□ -0.87
TRIM6-203ENST00000380107 BACH1O14867 736 aa9.61□□□□□ -0.87
TRIM6-203ENST00000380107 PJA2O43164 708 aa9.61□□□□□ -0.87
TRIM6-203ENST00000380107 OPA1O60313 960 aa9.61□□□□□ -0.87
TRIM6-203ENST00000380107 ERLIN2O94905 339 aa9.61□□□□□ -0.87
TRIM6-203ENST00000380107 LRRC63Q05C16 580 aa9.61□□□□□ -0.87
TRIM6-203ENST00000380107 HLTFQ14527 1009 aaKnown RBP eCLIP9.61□□□□□ -0.87
TRIM6-203ENST00000380107 FAM26FQ5R3K3 315 aa9.61□□□□□ -0.87
TRIM6-203ENST00000380107 KCTD1Q719H9 257 aa9.61□□□□□ -0.87
TRIM6-203ENST00000380107 MAATS1Q7Z4T9 603 aa9.61□□□□□ -0.87
TRIM6-203ENST00000380107 LZTS2Q9BRK4 669 aa9.61□□□□□ -0.87
TRIM6-203ENST00000380107 DDX25Q9UHL0 483 aaKnown RBP9.61□□□□□ -0.87
TRIM6-203ENST00000380107 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.61□□□□□ -0.87
TRIM6-203ENST00000380107 COL16A1Q07092 1604 aaPredicted RBP9.6□□□□□ -0.87
TRIM6-203ENST00000380107 GRID2IPA4D2P6 1211 aa9.6□□□□□ -0.87
TRIM6-203ENST00000380107 USP17L15C9J2P7 530 aa9.6□□□□□ -0.87
TRIM6-203ENST00000380107 USP17L13C9JLJ4 530 aa9.6□□□□□ -0.87
TRIM6-203ENST00000380107 USP17L11C9JVI0 530 aa9.6□□□□□ -0.87
TRIM6-203ENST00000380107 USP17L18D6R9N7 530 aa9.6□□□□□ -0.87
TRIM6-203ENST00000380107 USP17L22D6RA61 530 aa9.6□□□□□ -0.87
TRIM6-203ENST00000380107 USP17L17D6RBQ6 530 aa9.6□□□□□ -0.87
TRIM6-203ENST00000380107 USP17L19D6RCP7 530 aa9.6□□□□□ -0.87
TRIM6-203ENST00000380107 USP17L20D6RJB6 530 aa9.6□□□□□ -0.87
TRIM6-203ENST00000380107 MEIS1O00470 390 aa9.6□□□□□ -0.87
TRIM6-203ENST00000380107 AKR1B1P15121 316 aa9.6□□□□□ -0.87
TRIM6-203ENST00000380107 TAL1P17542 331 aaPredicted RBP9.6□□□□□ -0.87
TRIM6-203ENST00000380107 SLC9A1P19634 815 aa9.6□□□□□ -0.87
TRIM6-203ENST00000380107 FXR2P51116 673 aaKnown RBP eCLIP9.6□□□□□ -0.87
TRIM6-203ENST00000380107 CASP5P51878 434 aa9.6□□□□□ -0.87
TRIM6-203ENST00000380107 GTF2A1P52655 376 aaPredicted RBP9.6□□□□□ -0.87
TRIM6-203ENST00000380107 FKBP3Q00688 224 aaKnown RBP9.6□□□□□ -0.87
TRIM6-203ENST00000380107 KLHL30Q0D2K2 578 aa9.6□□□□□ -0.87
TRIM6-203ENST00000380107 USP17L24Q0WX57 530 aa9.6□□□□□ -0.87
TRIM6-203ENST00000380107 HERC4Q5GLZ8 1057 aaPredicted RBP9.6□□□□□ -0.87
TRIM6-203ENST00000380107 ICE2Q659A1 982 aa9.6□□□□□ -0.87
TRIM6-203ENST00000380107 USP17L6PQ6QN14 398 aa9.6□□□□□ -0.87
TRIM6-203ENST00000380107 DPP8Q6V1X1 898 aaPredicted RBP9.6□□□□□ -0.87
TRIM6-203ENST00000380107 IFT20Q8IY31 132 aa9.6□□□□□ -0.87
TRIM6-203ENST00000380107 IKZF4Q9H2S9 585 aa9.6□□□□□ -0.87
TRIM6-203ENST00000380107 STK17AQ9UEE5 414 aa9.6□□□□□ -0.87
TRIM6-203ENST00000380107 A0A087WUV0 522 aaPredicted RBP9.6□□□□□ -0.87
TRIM6-203ENST00000380107 UBAP1LF5GYI3 381 aa9.6□□□□□ -0.87
TRIM6-203ENST00000380107 SERPING1P05155 500 aa9.6□□□□□ -0.87
TRIM6-203ENST00000380107 PPP1R2P41236 205 aa9.6□□□□□ -0.87
TRIM6-203ENST00000380107 SNAP25P60880 206 aa9.6□□□□□ -0.87
TRIM6-203ENST00000380107 GPSM2P81274 684 aa9.6□□□□□ -0.87
TRIM6-203ENST00000380107 SHROOM1Q2M3G4 852 aaPredicted RBP9.6□□□□□ -0.87
TRIM6-203ENST00000380107 ZCWPW2Q504Y3 356 aa9.6□□□□□ -0.87
TRIM6-203ENST00000380107 SBF2Q86WG5 1849 aa9.6□□□□□ -0.87
TRIM6-203ENST00000380107 IQCKQ8N0W5 287 aa9.6□□□□□ -0.87
TRIM6-203ENST00000380107 CAVIN3Q969G5 261 aa9.6□□□□□ -0.87
TRIM6-203ENST00000380107 NYXQ9GZU5 481 aa9.6□□□□□ -0.87
TRIM6-203ENST00000380107 EFCC1Q9HA90 598 aa9.6□□□□□ -0.87
TRIM6-203ENST00000380107 GDF3Q9NR23 364 aa9.6□□□□□ -0.87
TRIM6-203ENST00000380107 CEP72Q9P209 647 aa9.6□□□□□ -0.87
TRIM6-203ENST00000380107 NARFQ9UHQ1 456 aa9.6□□□□□ -0.87
TRIM6-203ENST00000380107 ATP6V0A2Q9Y487 856 aa9.6□□□□□ -0.87
TRIM6-203ENST00000380107 MAST2Q6P0Q8 1798 aa9.59□□□□□ -0.87
TRIM6-203ENST00000380107 POTEFA5A3E0 1075 aa9.59□□□□□ -0.87
TRIM6-203ENST00000380107 MYO1FO00160 1098 aa9.59□□□□□ -0.87
TRIM6-203ENST00000380107 UFL1O94874 794 aa9.59□□□□□ -0.87
TRIM6-203ENST00000380107 FGFR1OPO95684 399 aaKnown RBP9.59□□□□□ -0.87
TRIM6-203ENST00000380107 POTEIP0CG38 1075 aa9.59□□□□□ -0.87
TRIM6-203ENST00000380107 EPS15P42566 896 aa9.59□□□□□ -0.87
TRIM6-203ENST00000380107 PPP4CP60510 307 aa9.59□□□□□ -0.87
TRIM6-203ENST00000380107 PTK2Q05397 1052 aa9.59□□□□□ -0.87
TRIM6-203ENST00000380107 ITIH3Q06033 890 aa9.59□□□□□ -0.87
TRIM6-203ENST00000380107 SF3A3Q12874 501 aaKnown RBP eCLIP9.59□□□□□ -0.87
TRIM6-203ENST00000380107 ADAM9Q13443 819 aa9.59□□□□□ -0.87
TRIM6-203ENST00000380107 NAB2Q15742 525 aa9.59□□□□□ -0.87
TRIM6-203ENST00000380107 TMEM119Q4V9L6 283 aa9.59□□□□□ -0.87
TRIM6-203ENST00000380107 COBLL1Q53SF7 1204 aa9.59□□□□□ -0.87
TRIM6-203ENST00000380107 MFSD14BQ5SR56 506 aa9.59□□□□□ -0.87
TRIM6-203ENST00000380107 CEP85LQ5SZL2 805 aa9.59□□□□□ -0.87
TRIM6-203ENST00000380107 ALS2CLQ60I27 953 aa9.59□□□□□ -0.87
TRIM6-203ENST00000380107 GJB7Q6PEY0 223 aa9.59□□□□□ -0.87
TRIM6-203ENST00000380107 POTEGQ6S5H5 508 aa9.59□□□□□ -0.87
TRIM6-203ENST00000380107 POTEEQ6S8J3 1075 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms