RNA–Protein interactions for RNA: ENST00000379053.4

LINC00654-201, long intergenic non-protein coding RNA 654, humanhuman

TSL 1 (best) BASIC

Gene LINC00654, Length 6,113 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00654-201ENST00000379053 AFPP02771 609 aaKnown RBP11.86□□□□□ -0.51
LINC00654-201ENST00000379053 TFRCP02786 760 aaKnown RBP11.86□□□□□ -0.51
LINC00654-201ENST00000379053 TROVE2P10155 538 aaKnown RBP eCLIP11.86□□□□□ -0.51
LINC00654-201ENST00000379053 SCRN1Q12765 414 aa11.86□□□□□ -0.51
LINC00654-201ENST00000379053 SF3A3Q12874 501 aaKnown RBP eCLIP11.86□□□□□ -0.51
LINC00654-201ENST00000379053 SPP2Q13103 211 aa11.86□□□□□ -0.51
LINC00654-201ENST00000379053 SH2D4BQ5SQS7 431 aa11.86□□□□□ -0.51
LINC00654-201ENST00000379053 TTLL11Q8NHH1 800 aa11.86□□□□□ -0.51
LINC00654-201ENST00000379053 URGCPQ8TCY9 931 aa11.86□□□□□ -0.51
LINC00654-201ENST00000379053 RNF123Q5XPI4 1314 aa11.86□□□□□ -0.51
LINC00654-201ENST00000379053 SGK1O00141 431 aa11.86□□□□□ -0.51
LINC00654-201ENST00000379053 CASQ2O14958 399 aaPredicted RBP11.86□□□□□ -0.51
LINC00654-201ENST00000379053 LRRN2O75325 713 aa11.86□□□□□ -0.51
LINC00654-201ENST00000379053 U2AF2P26368 475 aaKnown RBP eCLIP11.86□□□□□ -0.51
LINC00654-201ENST00000379053 ARHGAP4P98171 946 aa11.86□□□□□ -0.51
LINC00654-201ENST00000379053 DNAJC24Q6P3W2 148 aa11.86□□□□□ -0.51
LINC00654-201ENST00000379053 RAB44Q7Z6P3 723 aaPredicted RBP11.86□□□□□ -0.51
LINC00654-201ENST00000379053 GIMAP8Q8ND71 665 aaPredicted RBP11.86□□□□□ -0.51
LINC00654-201ENST00000379053 PUS7LQ9H0K6 701 aaKnown RBP11.86□□□□□ -0.51
LINC00654-201ENST00000379053 DPH5Q9H2P9 285 aa11.86□□□□□ -0.51
LINC00654-201ENST00000379053 TYW1Q9NV66 732 aaKnown RBP11.86□□□□□ -0.51
LINC00654-201ENST00000379053 PCDHA7Q9UN72 937 aa11.86□□□□□ -0.51
LINC00654-201ENST00000379053 CLIC4Q9Y696 253 aa11.86□□□□□ -0.51
LINC00654-201ENST00000379053 CARMIL3Q8ND23 1372 aa11.86□□□□□ -0.51
LINC00654-201ENST00000379053 EIF4E1BA6NMX2 242 aaKnown RBP11.86□□□□□ -0.51
LINC00654-201ENST00000379053 KRT3P12035 628 aa11.86□□□□□ -0.51
LINC00654-201ENST00000379053 PPFIA1Q13136 1202 aa11.86□□□□□ -0.51
LINC00654-201ENST00000379053 TOPORSQ9NS56 1045 aaPredicted RBP11.86□□□□□ -0.51
LINC00654-201ENST00000379053 MAPK4P31152 587 aa11.85□□□□□ -0.51
LINC00654-201ENST00000379053 GUCY2FP51841 1108 aa11.85□□□□□ -0.51
LINC00654-201ENST00000379053 CTTNQ14247 550 aaKnown RBP11.85□□□□□ -0.51
LINC00654-201ENST00000379053 SPATA1Q5VX52 437 aa11.85□□□□□ -0.51
LINC00654-201ENST00000379053 SH3RF3Q8TEJ3 882 aaPredicted RBP11.85□□□□□ -0.51
LINC00654-201ENST00000379053 ARHGEF1Q92888 912 aaKnown RBP11.85□□□□□ -0.51
LINC00654-201ENST00000379053 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.85□□□□□ -0.51
LINC00654-201ENST00000379053 TTLL4Q14679 1199 aa11.85□□□□□ -0.51
LINC00654-201ENST00000379053 HLFQ16534 295 aa11.85□□□□□ -0.51
LINC00654-201ENST00000379053 BBOF1Q8ND07 529 aa11.85□□□□□ -0.51
LINC00654-201ENST00000379053 DCAF4Q8WV16 495 aa11.85□□□□□ -0.51
LINC00654-201ENST00000379053 CFAP65Q6ZU64 1925 aaKnown RBP11.85□□□□□ -0.51
LINC00654-201ENST00000379053 GSPT1P15170 499 aaKnown RBP11.85□□□□□ -0.51
LINC00654-201ENST00000379053 GPSM2P81274 684 aa11.85□□□□□ -0.51
LINC00654-201ENST00000379053 NDUFAF2Q8N183 169 aa11.85□□□□□ -0.51
LINC00654-201ENST00000379053 FAM71BQ8TC56 605 aa11.85□□□□□ -0.51
LINC00654-201ENST00000379053 CTNNA1P35221 906 aaKnown RBP11.85□□□□□ -0.51
LINC00654-201ENST00000379053 JAK3P52333 1124 aa11.85□□□□□ -0.51
LINC00654-201ENST00000379053 ARL13BQ3SXY8 428 aa11.85□□□□□ -0.51
LINC00654-201ENST00000379053 TTC25Q96NG3 672 aa11.85□□□□□ -0.51
LINC00654-201ENST00000379053 MMP19Q99542 508 aa11.85□□□□□ -0.51
LINC00654-201ENST00000379053 FEM1BQ9UK73 627 aa11.85□□□□□ -0.51
LINC00654-201ENST00000379053 KIF21AQ7Z4S6 1674 aa11.85□□□□□ -0.51
LINC00654-201ENST00000379053 F8W8V4 182 aa11.85□□□□□ -0.51
LINC00654-201ENST00000379053 MTMR1Q13613 665 aa11.85□□□□□ -0.51
LINC00654-201ENST00000379053 NAA25Q14CX7 972 aa11.85□□□□□ -0.51
LINC00654-201ENST00000379053 SCN4BQ8IWT1 228 aa11.85□□□□□ -0.51
LINC00654-201ENST00000379053 COL15A1P39059 1388 aa11.85□□□□□ -0.51
LINC00654-201ENST00000379053 RNF40O75150 1001 aa11.84□□□□□ -0.51
LINC00654-201ENST00000379053 MXI1P50539 228 aa11.84□□□□□ -0.51
LINC00654-201ENST00000379053 SLFN12LQ6IEE8 588 aa11.84□□□□□ -0.51
LINC00654-201ENST00000379053 NUDT18Q6ZVK8 323 aa11.84□□□□□ -0.51
LINC00654-201ENST00000379053 B4GALNT4Q76KP1 1039 aa11.84□□□□□ -0.51
LINC00654-201ENST00000379053 TTC30BQ8N4P2 665 aa11.84□□□□□ -0.51
LINC00654-201ENST00000379053 CD209Q9NNX6 404 aa11.84□□□□□ -0.51
LINC00654-201ENST00000379053 PIH1D3Q9NQM4 214 aaKnown RBP11.84□□□□□ -0.51
LINC00654-201ENST00000379053 ABCC12Q96J65 1359 aa11.84□□□□□ -0.51
LINC00654-201ENST00000379053 ADGRL2O95490 1459 aa11.84□□□□□ -0.51
LINC00654-201ENST00000379053 GPC4O75487 556 aa11.84□□□□□ -0.51
LINC00654-201ENST00000379053 CYP21A2P08686 494 aa11.84□□□□□ -0.51
LINC00654-201ENST00000379053 FCER1AP12319 257 aa11.84□□□□□ -0.51
LINC00654-201ENST00000379053 NAA35Q5VZE5 725 aa11.84□□□□□ -0.51
LINC00654-201ENST00000379053 TBC1D9BQ66K14 1250 aa11.84□□□□□ -0.51
LINC00654-201ENST00000379053 PPP1R2P3Q6NXS1 205 aa11.84□□□□□ -0.51
LINC00654-201ENST00000379053 MAP4K1Q92918 833 aa11.84□□□□□ -0.51
LINC00654-201ENST00000379053 TUBGCP2Q9BSJ2 902 aa11.84□□□□□ -0.51
LINC00654-201ENST00000379053 RNF146Q9NTX7 359 aa11.84□□□□□ -0.51
LINC00654-201ENST00000379053 BCAP29Q9UHQ4 241 aa11.84□□□□□ -0.51
LINC00654-201ENST00000379053 FAM196BA6NMK8 535 aa11.84□□□□□ -0.51
LINC00654-201ENST00000379053 NSUN6Q8TEA1 469 aaKnown RBP11.84□□□□□ -0.51
LINC00654-201ENST00000379053 CALN1Q9BXU9 219 aa11.84□□□□□ -0.51
LINC00654-201ENST00000379053 FAM8A1Q9UBU6 413 aa11.84□□□□□ -0.51
LINC00654-201ENST00000379053 PRPSAP2O60256 369 aa11.84□□□□□ -0.51
LINC00654-201ENST00000379053 COBLO75128 1261 aa11.84□□□□□ -0.51
LINC00654-201ENST00000379053 ZNF18P17022 549 aa11.84□□□□□ -0.51
LINC00654-201ENST00000379053 PHKA2P46019 1235 aa11.84□□□□□ -0.51
LINC00654-201ENST00000379053 TSPY1Q01534 308 aa11.84□□□□□ -0.51
LINC00654-201ENST00000379053 GOLGA8FQ08AF8 430 aa11.84□□□□□ -0.51
LINC00654-201ENST00000379053 GOLGA8DPQ0D2H9 430 aa11.84□□□□□ -0.51
LINC00654-201ENST00000379053 THOC5Q13769 683 aaKnown RBP11.84□□□□□ -0.51
LINC00654-201ENST00000379053 SEPT6Q14141 434 aa11.84□□□□□ -0.51
LINC00654-201ENST00000379053 RABEP2Q9H5N1 569 aa11.84□□□□□ -0.51
LINC00654-201ENST00000379053 EFCC1Q9HA90 598 aa11.84□□□□□ -0.51
LINC00654-201ENST00000379053 EIF3CLB5ME19 914 aaKnown RBP11.84□□□□□ -0.51
LINC00654-201ENST00000379053 NEMP1O14524 444 aa11.84□□□□□ -0.51
LINC00654-201ENST00000379053 ARHGEF18Q6ZSZ5 1173 aa11.84□□□□□ -0.51
LINC00654-201ENST00000379053 ANKRD13CQ8N6S4 541 aa11.84□□□□□ -0.51
LINC00654-201ENST00000379053 EIF3CQ99613 913 aaKnown RBP11.84□□□□□ -0.51
LINC00654-201ENST00000379053 DESI2Q9BSY9 194 aa11.84□□□□□ -0.51
LINC00654-201ENST00000379053 FANCLQ9NW38 375 aa11.84□□□□□ -0.51
LINC00654-201ENST00000379053 ADGRL3Q9HAR2 1447 aa11.83□□□□□ -0.51
LINC00654-201ENST00000379053 PASKQ96RG2 1323 aa11.83□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms