RNA–Protein interactions for RNA: ENST00000378182.3

TRIM13-202, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 7,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-202ENST00000378182 MMP10P09238 476 aa15.26■□□□□ 0.03
TRIM13-202ENST00000378182 CAPRIN1Q14444 709 aaKnown RBP15.26■□□□□ 0.03
TRIM13-202ENST00000378182 KIF19Q2TAC6 998 aa15.26■□□□□ 0.03
TRIM13-202ENST00000378182 CNOT6LQ96LI5 555 aaKnown RBP15.26■□□□□ 0.03
TRIM13-202ENST00000378182 WRNIP1Q96S55 665 aa15.26■□□□□ 0.03
TRIM13-202ENST00000378182 NR2F2P24468 414 aa15.26■□□□□ 0.03
TRIM13-202ENST00000378182 TMED2Q15363 201 aa15.26■□□□□ 0.03
TRIM13-202ENST00000378182 ASPRV1Q53RT3 343 aa15.26■□□□□ 0.03
TRIM13-202ENST00000378182 RSBN1LQ6PCB5 846 aaPredicted RBP15.26■□□□□ 0.03
TRIM13-202ENST00000378182 RNF207Q6ZRF8 634 aa15.26■□□□□ 0.03
TRIM13-202ENST00000378182 NDUFAF2Q8N183 169 aa15.26■□□□□ 0.03
TRIM13-202ENST00000378182 RAVER2Q9HCJ3 691 aaKnown RBP15.26■□□□□ 0.03
TRIM13-202ENST00000378182 LEMD3Q9Y2U8 911 aa15.26■□□□□ 0.03
TRIM13-202ENST00000378182 EDC4Q6P2E9 1401 aaKnown RBP15.26■□□□□ 0.03
TRIM13-202ENST00000378182 PRPF4O43172 522 aaKnown RBP eCLIP15.26■□□□□ 0.032e-6■■□□□ 13.2
TRIM13-202ENST00000378182 GNAT1P11488 350 aa15.26■□□□□ 0.03
TRIM13-202ENST00000378182 DRP2Q13474 957 aa15.26■□□□□ 0.03
TRIM13-202ENST00000378182 ARHGEF1Q92888 912 aaKnown RBP15.26■□□□□ 0.03
TRIM13-202ENST00000378182 MSTO1Q9BUK6 570 aa15.26■□□□□ 0.03
TRIM13-202ENST00000378182 XPO4Q9C0E2 1151 aaKnown RBP15.26■□□□□ 0.03
TRIM13-202ENST00000378182 H3BRJ5 948 aa15.26■□□□□ 0.03
TRIM13-202ENST00000378182 EHHADHQ08426 723 aa15.26■□□□□ 0.03
TRIM13-202ENST00000378182 DNAJC24Q6P3W2 148 aa15.26■□□□□ 0.03
TRIM13-202ENST00000378182 TRMT10CQ7L0Y3 403 aaKnown RBP15.26■□□□□ 0.03
TRIM13-202ENST00000378182 TRIM59Q8IWR1 403 aa15.26■□□□□ 0.03
TRIM13-202ENST00000378182 OTUD5Q96G74 571 aa15.26■□□□□ 0.03
TRIM13-202ENST00000378182 NUDCD1Q96RS6 583 aa15.26■□□□□ 0.03
TRIM13-202ENST00000378182 MMP19Q99542 508 aa15.26■□□□□ 0.03
TRIM13-202ENST00000378182 TLK1Q9UKI8 766 aa15.26■□□□□ 0.03
TRIM13-202ENST00000378182 SGSM2O43147 1006 aa15.25■□□□□ 0.03
TRIM13-202ENST00000378182 GFPT2O94808 682 aa15.25■□□□□ 0.03
TRIM13-202ENST00000378182 PTH1RQ03431 593 aa15.25■□□□□ 0.03
TRIM13-202ENST00000378182 CYP4F22Q6NT55 531 aa15.25■□□□□ 0.03
TRIM13-202ENST00000378182 TSPYL2Q9H2G4 693 aaPredicted RBP15.25■□□□□ 0.03
TRIM13-202ENST00000378182 CAPN15O75808 1086 aa15.25■□□□□ 0.03
TRIM13-202ENST00000378182 NCF2P19878 526 aaPredicted RBP15.25■□□□□ 0.03
TRIM13-202ENST00000378182 SRPK1Q96SB4 655 aaKnown RBP15.25■□□□□ 0.03
TRIM13-202ENST00000378182 KLHL14Q9P2G3 628 aa15.25■□□□□ 0.03
TRIM13-202ENST00000378182 MAP10Q9P2G4 905 aa15.25■□□□□ 0.03
TRIM13-202ENST00000378182 SART1O43290 800 aaKnown RBP15.25■□□□□ 0.03
TRIM13-202ENST00000378182 DDAH1O94760 285 aa15.25■□□□□ 0.03
TRIM13-202ENST00000378182 LZICQ8WZA0 190 aa15.25■□□□□ 0.03
TRIM13-202ENST00000378182 CYP2D7A0A087X1C5 515 aa15.25■□□□□ 0.03
TRIM13-202ENST00000378182 HSPD1P10809 573 aaKnown RBP15.25■□□□□ 0.03
TRIM13-202ENST00000378182 ARL13BQ3SXY8 428 aa15.25■□□□□ 0.03
TRIM13-202ENST00000378182 FBXL13Q8NEE6 735 aa15.25■□□□□ 0.03
TRIM13-202ENST00000378182 DOLKQ9UPQ8 538 aa15.25■□□□□ 0.03
TRIM13-202ENST00000378182 BTBD18B2RXH4 712 aa15.25■□□□□ 0.03
TRIM13-202ENST00000378182 C8orf34Q49A92 452 aa15.25■□□□□ 0.03
TRIM13-202ENST00000378182 TBCKQ8TEA7 893 aa15.25■□□□□ 0.03
TRIM13-202ENST00000378182 SH3KBP1Q96B97 665 aa15.25■□□□□ 0.03
TRIM13-202ENST00000378182 NEUROG2Q9H2A3 272 aa15.25■□□□□ 0.03
TRIM13-202ENST00000378182 TBX22Q9Y458 520 aa15.25■□□□□ 0.03
TRIM13-202ENST00000378182 CREB3O43889 395 aa15.25■□□□□ 0.03
TRIM13-202ENST00000378182 ARMCX2Q7L311 632 aa15.25■□□□□ 0.03
TRIM13-202ENST00000378182 PASD1Q8IV76 773 aa15.25■□□□□ 0.03
TRIM13-202ENST00000378182 OTULINQ96BN8 352 aa15.25■□□□□ 0.03
TRIM13-202ENST00000378182 ATP10BO94823 1461 aa15.24■□□□□ 0.03
TRIM13-202ENST00000378182 MLH3Q9UHC1 1453 aa15.24■□□□□ 0.03
TRIM13-202ENST00000378182 NNMTP40261 264 aa15.24■□□□□ 0.03
TRIM13-202ENST00000378182 ARHGDIAP52565 204 aa15.24■□□□□ 0.03
TRIM13-202ENST00000378182 PBXIP1Q96AQ6 731 aa15.24■□□□□ 0.03
TRIM13-202ENST00000378182 SASH1O94885 1247 aa15.24■□□□□ 0.03
TRIM13-202ENST00000378182 TMEM259Q4ZIN3 620 aa15.24■□□□□ 0.03
TRIM13-202ENST00000378182 FAM26FQ5R3K3 315 aa15.24■□□□□ 0.03
TRIM13-202ENST00000378182 KDM5AP29375 1690 aaKnown RBP15.24■□□□□ 0.03
TRIM13-202ENST00000378182 SEMA3EO15041 775 aa15.24■□□□□ 0.03
TRIM13-202ENST00000378182 CCDC38Q502W7 563 aa15.24■□□□□ 0.03
TRIM13-202ENST00000378182 MAGOHBQ96A72 148 aaKnown RBP15.24■□□□□ 0.03
TRIM13-202ENST00000378182 DYRK4Q9NR20 520 aa15.24■□□□□ 0.03
TRIM13-202ENST00000378182 ATP5JP18859 108 aa15.24■□□□□ 0.03
TRIM13-202ENST00000378182 CYP27A1Q02318 531 aa15.24■□□□□ 0.03
TRIM13-202ENST00000378182 MFSD14CQ5VZR4 134 aa15.24■□□□□ 0.03
TRIM13-202ENST00000378182 FAM186BQ8IYM0 893 aa15.24■□□□□ 0.03
TRIM13-202ENST00000378182 GBP5Q96PP8 586 aa15.24■□□□□ 0.03
TRIM13-202ENST00000378182 GCNT4Q9P109 453 aa15.24■□□□□ 0.03
TRIM13-202ENST00000378182 USH1CQ9Y6N9 552 aa15.24■□□□□ 0.03
TRIM13-202ENST00000378182 ARHGEF37A1IGU5 675 aa15.24■□□□□ 0.03
TRIM13-202ENST00000378182 PEX3P56589 373 aa15.24■□□□□ 0.03
TRIM13-202ENST00000378182 NME3Q13232 169 aa15.24■□□□□ 0.03
TRIM13-202ENST00000378182 RTKN2Q8IZC4 609 aa15.24■□□□□ 0.03
TRIM13-202ENST00000378182 PI4KBQ9UBF8 816 aa15.24■□□□□ 0.03
TRIM13-202ENST00000378182 PCDHA4Q9UN74 947 aa15.24■□□□□ 0.03
TRIM13-202ENST00000378182 SGO2Q562F6 1265 aa15.23■□□□□ 0.03
TRIM13-202ENST00000378182 MAP3K21Q5TCX8 1036 aa15.23■□□□□ 0.03
TRIM13-202ENST00000378182 THNSL1Q8IYQ7 743 aa15.23■□□□□ 0.03
TRIM13-202ENST00000378182 TRIM58Q8NG06 486 aa15.23■□□□□ 0.03
TRIM13-202ENST00000378182 SCHIP1Q9P0W5 487 aaPredicted RBP15.23■□□□□ 0.03
TRIM13-202ENST00000378182 SERPIND1P05546 499 aa15.23■□□□□ 0.03
TRIM13-202ENST00000378182 CROCCP2Q86T23 111 aa15.23■□□□□ 0.03
TRIM13-202ENST00000378182 RHPN2Q8IUC4 686 aa15.23■□□□□ 0.03
TRIM13-202ENST00000378182 CXCR5P32302 372 aa15.23■□□□□ 0.03
TRIM13-202ENST00000378182 PRAG1Q86YV5 1406 aa15.23■□□□□ 0.03
TRIM13-202ENST00000378182 CFAP69A5D8W1 941 aa15.23■□□□□ 0.03
TRIM13-202ENST00000378182 FAM83BQ5T0W9 1011 aa15.23■□□□□ 0.03
TRIM13-202ENST00000378182 FSD1LQ9BXM9 530 aa15.23■□□□□ 0.03
TRIM13-202ENST00000378182 PASKQ96RG2 1323 aa15.23■□□□□ 0.03
TRIM13-202ENST00000378182 ERO1AQ96HE7 468 aa15.23■□□□□ 0.03
TRIM13-202ENST00000378182 IMPACTQ9P2X3 320 aa15.23■□□□□ 0.03
TRIM13-202ENST00000378182 ZBTB1Q9Y2K1 713 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms