RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 ARP10275 920 aa15.04■□□□□ -0
CKAP2-202ENST00000378034 HOXD8P13378 290 aaPredicted RBP15.04■□□□□ -0
CKAP2-202ENST00000378034 PDCP20941 246 aa15.04■□□□□ -0
CKAP2-202ENST00000378034 IRX5P78411 483 aaPredicted RBP15.04■□□□□ -0
CKAP2-202ENST00000378034 DGKDQ16760 1214 aa15.04■□□□□ -0
CKAP2-202ENST00000378034 C1orf53Q5VUE5 145 aa15.04■□□□□ -0
CKAP2-202ENST00000378034 PPP4R3AQ6IN85 833 aa15.04■□□□□ -0
CKAP2-202ENST00000378034 CYFIP1Q7L576 1253 aa15.04■□□□□ -0
CKAP2-202ENST00000378034 SDF4Q9BRK5 362 aa15.04■□□□□ -0
CKAP2-202ENST00000378034 PURAQ00577 322 aaKnown RBP15.03■□□□□ -0
CKAP2-202ENST00000378034 GNL2Q13823 731 aaKnown RBP15.03■□□□□ -0
CKAP2-202ENST00000378034 PRR16Q569H4 304 aa15.03■□□□□ -0
CKAP2-202ENST00000378034 LARP1BQ659C4 914 aaKnown RBP15.03■□□□□ -0
CKAP2-202ENST00000378034 LENG9Q96B70 501 aa15.03■□□□□ -0
CKAP2-202ENST00000378034 MTG1Q9BT17 334 aaPredicted RBP15.03■□□□□ -0
CKAP2-202ENST00000378034 STARD7Q9NQZ5 370 aa15.03■□□□□ -0
CKAP2-202ENST00000378034 TBC1D22BQ9NU19 505 aa15.03■□□□□ -0
CKAP2-202ENST00000378034 H3BQV1 296 aa15.02■□□□□ -0
CKAP2-202ENST00000378034 IPO5O00410 1097 aaKnown RBP15.02■□□□□ -0
CKAP2-202ENST00000378034 NOP56O00567 594 aaKnown RBP15.02■□□□□ -0
CKAP2-202ENST00000378034 MYL3P08590 195 aa15.02■□□□□ -0
CKAP2-202ENST00000378034 U2AF2P26368 475 aaKnown RBP eCLIP15.02■□□□□ -05e-6■□□□□ 9.7
CKAP2-202ENST00000378034 MLLT1Q03111 559 aaPredicted RBP15.02■□□□□ -0
CKAP2-202ENST00000378034 SNX17Q15036 470 aa15.02■□□□□ -0
CKAP2-202ENST00000378034 LETM2Q2VYF4 491 aa15.02■□□□□ -0
CKAP2-202ENST00000378034 HSDL1Q3SXM5 330 aa15.02■□□□□ -0
CKAP2-202ENST00000378034 EARS2Q5JPH6 523 aaKnown RBP15.02■□□□□ -0
CKAP2-202ENST00000378034 CXCL17Q6UXB2 119 aa15.02■□□□□ -0
CKAP2-202ENST00000378034 SLC39A5Q6ZMH5 540 aa15.02■□□□□ -0
CKAP2-202ENST00000378034 FERMT2Q96AC1 680 aa15.02■□□□□ -0
CKAP2-202ENST00000378034 ZNF577Q9BSK1 485 aa15.02■□□□□ -0
CKAP2-202ENST00000378034 JPH1Q9HDC5 661 aaPredicted RBP15.02■□□□□ -0
CKAP2-202ENST00000378034 DOCK5Q9H7D0 1870 aa15.02□□□□□ -0.01
CKAP2-202ENST00000378034 NOSTRINQ8IVI9 506 aa15.02□□□□□ -0.01
CKAP2-202ENST00000378034 GPR20Q99678 358 aa15.02□□□□□ -0.01
CKAP2-202ENST00000378034 SLC9A2Q9UBY0 812 aa15.02□□□□□ -0.01
CKAP2-202ENST00000378034 DDX25Q9UHL0 483 aaKnown RBP15.02□□□□□ -0.01
CKAP2-202ENST00000378034 A0A0U1RQG5 324 aaPredicted RBP15.01□□□□□ -0.01
CKAP2-202ENST00000378034 TDP2O95551 362 aa15.01□□□□□ -0.01
CKAP2-202ENST00000378034 ITGB3BPQ13352 177 aaPredicted RBP15.01□□□□□ -0.01
CKAP2-202ENST00000378034 VTI1AQ96AJ9 217 aa15.01□□□□□ -0.01
CKAP2-202ENST00000378034 RIT2Q99578 217 aa15.01□□□□□ -0.01
CKAP2-202ENST00000378034 BCAS3Q9H6U6 928 aa15.01□□□□□ -0.01
CKAP2-202ENST00000378034 PKD2L1Q9P0L9 805 aa15.01□□□□□ -0.01
CKAP2-202ENST00000378034 MSH4O15457 936 aa15□□□□□ -0.01
CKAP2-202ENST00000378034 CCNT1O60563 726 aaKnown RBP15□□□□□ -0.01
CKAP2-202ENST00000378034 TRAPPC10P48553 1259 aa15□□□□□ -0.01
CKAP2-202ENST00000378034 SEPT1Q8WYJ6 367 aa15□□□□□ -0.01
CKAP2-202ENST00000378034 KATNAL1Q9BW62 490 aa15□□□□□ -0.01
CKAP2-202ENST00000378034 TCEAL9Q9UHQ7 104 aa15□□□□□ -0.01
CKAP2-202ENST00000378034 FAM205CA6NFA0 338 aa15□□□□□ -0.01
CKAP2-202ENST00000378034 TBX3O15119 743 aa15□□□□□ -0.01
CKAP2-202ENST00000378034 DHX15O43143 795 aaKnown RBP15□□□□□ -0.01
CKAP2-202ENST00000378034 SORBS3O60504 671 aa15□□□□□ -0.01
CKAP2-202ENST00000378034 HSP90AA1P07900 732 aaKnown RBP15□□□□□ -0.01
CKAP2-202ENST00000378034 PDIA4P13667 645 aaKnown RBP15□□□□□ -0.01
CKAP2-202ENST00000378034 ORC2Q13416 577 aaPredicted RBP15□□□□□ -0.01
CKAP2-202ENST00000378034 SLC43A3Q8NBI5 491 aa15□□□□□ -0.01
CKAP2-202ENST00000378034 SLC5A5Q92911 643 aa15□□□□□ -0.01
CKAP2-202ENST00000378034 FAM20AQ96MK3 541 aa15□□□□□ -0.01
CKAP2-202ENST00000378034 NOL7Q9UMY1 257 aaKnown RBP15□□□□□ -0.01
CKAP2-202ENST00000378034 MROH7Q68CQ1 1323 aa15□□□□□ -0.01
CKAP2-202ENST00000378034 SCN10AQ9Y5Y9 1956 aa14.99□□□□□ -0.01
CKAP2-202ENST00000378034 ARVCFO00192 962 aa14.99□□□□□ -0.01
CKAP2-202ENST00000378034 F2P00734 622 aa14.99□□□□□ -0.01
CKAP2-202ENST00000378034 ATN1P54259 1190 aaPredicted RBP14.99□□□□□ -0.01
CKAP2-202ENST00000378034 KRT76Q01546 638 aa14.99□□□□□ -0.01
CKAP2-202ENST00000378034 ITGA7Q13683 1181 aa14.99□□□□□ -0.01
CKAP2-202ENST00000378034 LRRC26Q2I0M4 334 aa14.99□□□□□ -0.01
CKAP2-202ENST00000378034 ZNF746Q6NUN9 644 aaPredicted RBP14.99□□□□□ -0.01
CKAP2-202ENST00000378034 GSTTP1A0A1W2PQM5 241 aa14.98□□□□□ -0.01
CKAP2-202ENST00000378034 KIF28PB7ZC32 967 aa14.98□□□□□ -0.01
CKAP2-202ENST00000378034 ATG7O95352 703 aa14.98□□□□□ -0.01
CKAP2-202ENST00000378034 CDK7P50613 346 aa14.98□□□□□ -0.01
CKAP2-202ENST00000378034 PTPN11Q06124 597 aaPredicted RBP14.98□□□□□ -0.01
CKAP2-202ENST00000378034 MCTP1Q6DN14 999 aa14.98□□□□□ -0.01
CKAP2-202ENST00000378034 SMAP1Q8IYB5 467 aaPredicted RBP14.98□□□□□ -0.01
CKAP2-202ENST00000378034 ETNPPLQ8TBG4 499 aa14.98□□□□□ -0.01
CKAP2-202ENST00000378034 DPF3Q92784 378 aa14.98□□□□□ -0.01
CKAP2-202ENST00000378034 TOX2Q96NM4 488 aa14.98□□□□□ -0.01
CKAP2-202ENST00000378034 KCNMB3Q9NPA1 279 aa14.98□□□□□ -0.01
CKAP2-202ENST00000378034 ALPK3Q96L96 1907 aa14.98□□□□□ -0.01
CKAP2-202ENST00000378034 SLC37A4O43826 429 aa14.98□□□□□ -0.01
CKAP2-202ENST00000378034 GAS7O60861 476 aa14.98□□□□□ -0.01
CKAP2-202ENST00000378034 BAG4O95429 457 aaKnown RBP14.98□□□□□ -0.01
CKAP2-202ENST00000378034 LGALS2P05162 132 aa14.98□□□□□ -0.01
CKAP2-202ENST00000378034 TCF7P36402 384 aaPredicted RBP14.98□□□□□ -0.01
CKAP2-202ENST00000378034 RTP1P59025 263 aa14.98□□□□□ -0.01
CKAP2-202ENST00000378034 ACTR2P61160 394 aa14.98□□□□□ -0.01
CKAP2-202ENST00000378034 BECN1Q14457 450 aa14.98□□□□□ -0.01
CKAP2-202ENST00000378034 LRCH2Q5VUJ6 765 aa14.98□□□□□ -0.01
CKAP2-202ENST00000378034 NFRKBQ6P4R8 1299 aa14.98□□□□□ -0.01
CKAP2-202ENST00000378034 ANKRD33Q7Z3H0 272 aa14.98□□□□□ -0.01
CKAP2-202ENST00000378034 KAT2BQ92831 832 aa14.98□□□□□ -0.01
CKAP2-202ENST00000378034 C16orf70Q9BSU1 422 aa14.98□□□□□ -0.01
CKAP2-202ENST00000378034 TEKT3Q9BXF9 490 aa14.98□□□□□ -0.01
CKAP2-202ENST00000378034 ZNF215Q9UL58 517 aaPredicted RBP14.98□□□□□ -0.01
CKAP2-202ENST00000378034 GRIN2DO15399 1336 aa14.97□□□□□ -0.01
CKAP2-202ENST00000378034 EMSYQ7Z589 1322 aa14.97□□□□□ -0.01
CKAP2-202ENST00000378034 HAS3O00219 553 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms