RNA–Protein interactions for RNA: ENST00000377843.6

CSNK1A1-202, Transcript of casein kinase 1 alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1A1, Length 2,559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-202ENST00000377843 TMC3Q7Z5M5 1100 aa17.18■□□□□ 0.34
CSNK1A1-202ENST00000377843 TMTC2Q8N394 836 aa17.18■□□□□ 0.34
CSNK1A1-202ENST00000377843 STAG2Q8N3U4 1231 aa17.18■□□□□ 0.34
CSNK1A1-202ENST00000377843 ATXN2LQ8WWM7 1075 aaKnown RBP17.18■□□□□ 0.34
CSNK1A1-202ENST00000377843 CNKSR1Q969H4 720 aa17.18■□□□□ 0.34
CSNK1A1-202ENST00000377843 A6NHS1 94 aa17.18■□□□□ 0.34
CSNK1A1-202ENST00000377843 F8VZ95 297 aa17.18■□□□□ 0.34
CSNK1A1-202ENST00000377843 MAP3K13O43283 966 aa17.18■□□□□ 0.34
CSNK1A1-202ENST00000377843 DAPK3O43293 454 aa17.18■□□□□ 0.34
CSNK1A1-202ENST00000377843 CAND2O75155 1236 aa17.18■□□□□ 0.34
CSNK1A1-202ENST00000377843 MYBL1P10243 752 aa17.18■□□□□ 0.34
CSNK1A1-202ENST00000377843 CHN1P15882 459 aa17.18■□□□□ 0.34
CSNK1A1-202ENST00000377843 NCALDP61601 193 aa17.18■□□□□ 0.34
CSNK1A1-202ENST00000377843 MAP3K12Q12852 859 aa17.18■□□□□ 0.34
CSNK1A1-202ENST00000377843 CUL1Q13616 776 aa17.18■□□□□ 0.34
CSNK1A1-202ENST00000377843 SAMD1Q6SPF0 538 aaPredicted RBP17.18■□□□□ 0.34
CSNK1A1-202ENST00000377843 CCHCR1Q8TD31 782 aa17.18■□□□□ 0.34
CSNK1A1-202ENST00000377843 FAM89AQ96GI7 184 aa17.18■□□□□ 0.34
CSNK1A1-202ENST00000377843 ADAM7Q9H2U9 754 aa17.18■□□□□ 0.34
CSNK1A1-202ENST00000377843 PCDHGC5Q9Y5F6 944 aa17.18■□□□□ 0.34
CSNK1A1-202ENST00000377843 RBAK-RBAKDNI3L0D1 243 aa17.17■□□□□ 0.34
CSNK1A1-202ENST00000377843 GLI3P10071 1580 aa17.17■□□□□ 0.34
CSNK1A1-202ENST00000377843 RARAP10276 462 aa17.17■□□□□ 0.34
CSNK1A1-202ENST00000377843 NQO1P15559 274 aaKnown RBP17.17■□□□□ 0.34
CSNK1A1-202ENST00000377843 PDE4DQ08499 809 aa17.17■□□□□ 0.34
CSNK1A1-202ENST00000377843 TDRD12Q587J7 1177 aaKnown RBP17.17■□□□□ 0.34
CSNK1A1-202ENST00000377843 CCDC178Q5BJE1 867 aa17.17■□□□□ 0.34
CSNK1A1-202ENST00000377843 TRPM8Q7Z2W7 1104 aa17.17■□□□□ 0.34
CSNK1A1-202ENST00000377843 ENAHQ8N8S7 591 aaPredicted RBP17.17■□□□□ 0.34
CSNK1A1-202ENST00000377843 EIF1ADQ8N9N8 165 aaKnown RBP17.17■□□□□ 0.34
CSNK1A1-202ENST00000377843 SCFD2Q8WU76 684 aa17.17■□□□□ 0.34
CSNK1A1-202ENST00000377843 NLRP3Q96P20 1036 aa17.17■□□□□ 0.34
CSNK1A1-202ENST00000377843 ELAC2Q9BQ52 826 aaKnown RBP17.17■□□□□ 0.34
CSNK1A1-202ENST00000377843 AFF2P51816 1311 aa17.17■□□□□ 0.34
CSNK1A1-202ENST00000377843 UBOX5O94941 541 aa17.17■□□□□ 0.34
CSNK1A1-202ENST00000377843 MMEP08473 750 aa17.17■□□□□ 0.34
CSNK1A1-202ENST00000377843 RPS6KA3P51812 740 aa17.17■□□□□ 0.34
CSNK1A1-202ENST00000377843 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.17■□□□□ 0.342e-8■■■■■ 58.1
CSNK1A1-202ENST00000377843 DDX47Q9H0S4 455 aaKnown RBP17.17■□□□□ 0.34
CSNK1A1-202ENST00000377843 TMEM60Q9H2L4 133 aa17.17■□□□□ 0.34
CSNK1A1-202ENST00000377843 MYH6P13533 1939 aa17.17■□□□□ 0.34
CSNK1A1-202ENST00000377843 SCN11AQ9UI33 1791 aa17.16■□□□□ 0.34
CSNK1A1-202ENST00000377843 COL5A2P05997 1499 aaPredicted RBP17.16■□□□□ 0.34
CSNK1A1-202ENST00000377843 FAM205AQ6ZU69 1335 aa17.16■□□□□ 0.34
CSNK1A1-202ENST00000377843 CFAP73A6NFT4 308 aa17.16■□□□□ 0.34
CSNK1A1-202ENST00000377843 KCNK3O14649 394 aa17.16■□□□□ 0.34
CSNK1A1-202ENST00000377843 ITIH4Q14624 930 aa17.16■□□□□ 0.34
CSNK1A1-202ENST00000377843 RBBP5Q15291 538 aaKnown RBP17.16■□□□□ 0.34
CSNK1A1-202ENST00000377843 FAM114A1Q8IWE2 563 aa17.16■□□□□ 0.34
CSNK1A1-202ENST00000377843 KIF2BQ8N4N8 673 aa17.16■□□□□ 0.34
CSNK1A1-202ENST00000377843 BORCS6Q96GS4 357 aa17.16■□□□□ 0.34
CSNK1A1-202ENST00000377843 ZNF512BQ96KM6 892 aaPredicted RBP17.16■□□□□ 0.34
CSNK1A1-202ENST00000377843 SWAP70Q9UH65 585 aa17.16■□□□□ 0.34
CSNK1A1-202ENST00000377843 FBXO3Q9UK99 471 aa17.16■□□□□ 0.34
CSNK1A1-202ENST00000377843 THRAP3Q9Y2W1 955 aaKnown RBP17.16■□□□□ 0.34
CSNK1A1-202ENST00000377843 ASAP2O43150 1006 aa17.16■□□□□ 0.34
CSNK1A1-202ENST00000377843 SHBGP04278 402 aa17.16■□□□□ 0.34
CSNK1A1-202ENST00000377843 IFIT5Q13325 482 aaKnown RBP17.16■□□□□ 0.34
CSNK1A1-202ENST00000377843 KIAA0895Q8NCT3 520 aa17.16■□□□□ 0.34
CSNK1A1-202ENST00000377843 ZCRB1Q8TBF4 217 aaKnown RBP17.16■□□□□ 0.34
CSNK1A1-202ENST00000377843 NLRC4Q9NPP4 1024 aa17.16■□□□□ 0.34
CSNK1A1-202ENST00000377843 BICDL2A1A5D9 508 aa17.15■□□□□ 0.34
CSNK1A1-202ENST00000377843 IGF2BP3O00425 579 aaKnown RBP eCLIP17.15■□□□□ 0.34
CSNK1A1-202ENST00000377843 KRT16P08779 473 aa17.15■□□□□ 0.34
CSNK1A1-202ENST00000377843 ITGA4P13612 1032 aa17.15■□□□□ 0.34
CSNK1A1-202ENST00000377843 DHX9Q08211 1270 aaKnown RBP17.15■□□□□ 0.34
CSNK1A1-202ENST00000377843 MKRN4PQ13434 485 aaPredicted RBP17.15■□□□□ 0.34
CSNK1A1-202ENST00000377843 ANKRD20A2Q5SQ80 823 aa17.15■□□□□ 0.34
CSNK1A1-202ENST00000377843 ANKRD20A1Q5TYW2 823 aa17.15■□□□□ 0.34
CSNK1A1-202ENST00000377843 ANKRD20A3Q5VUR7 823 aa17.15■□□□□ 0.34
CSNK1A1-202ENST00000377843 ARL6IP4Q66PJ3 421 aaKnown RBP17.15■□□□□ 0.34
CSNK1A1-202ENST00000377843 SRBD1Q8N5C6 995 aaKnown RBP17.15■□□□□ 0.34
CSNK1A1-202ENST00000377843 VGLL2Q8N8G2 317 aa17.15■□□□□ 0.34
CSNK1A1-202ENST00000377843 ANKS4BQ8N8V4 417 aa17.15■□□□□ 0.34
CSNK1A1-202ENST00000377843 RASGRP4Q8TDF6 673 aa17.15■□□□□ 0.34
CSNK1A1-202ENST00000377843 CENPTQ96BT3 561 aa17.15■□□□□ 0.34
CSNK1A1-202ENST00000377843 CPSF2Q9P2I0 782 aaKnown RBP17.15■□□□□ 0.34
CSNK1A1-202ENST00000377843 CNTNAP5Q8WYK1 1306 aa17.15■□□□□ 0.34
CSNK1A1-202ENST00000377843 SSU72P8A0A1W2PR75 194 aa17.15■□□□□ 0.34
CSNK1A1-202ENST00000377843 NLRP5P59047 1200 aa17.15■□□□□ 0.34
CSNK1A1-202ENST00000377843 LDHAL6AQ6ZMR3 332 aa17.15■□□□□ 0.34
CSNK1A1-202ENST00000377843 CHD4Q14839 1912 aa17.15■□□□□ 0.34
CSNK1A1-202ENST00000377843 FESP07332 822 aa17.14■□□□□ 0.33
CSNK1A1-202ENST00000377843 TRAPPC10P48553 1259 aa17.14■□□□□ 0.33
CSNK1A1-202ENST00000377843 KCNMA1Q12791 1236 aa17.14■□□□□ 0.33
CSNK1A1-202ENST00000377843 TROAPQ12815 778 aa17.14■□□□□ 0.33
CSNK1A1-202ENST00000377843 DNAAF5Q86Y56 855 aa17.14■□□□□ 0.33
CSNK1A1-202ENST00000377843 MIGA1Q8NAN2 632 aa17.14■□□□□ 0.33
CSNK1A1-202ENST00000377843 KCNV2Q8TDN2 545 aa17.14■□□□□ 0.33
CSNK1A1-202ENST00000377843 CNOT10Q9H9A5 744 aaKnown RBP17.14■□□□□ 0.33
CSNK1A1-202ENST00000377843 AMACRQ9UHK6 382 aa17.14■□□□□ 0.33
CSNK1A1-202ENST00000377843 NUP188Q5SRE5 1749 aa17.14■□□□□ 0.33
CSNK1A1-202ENST00000377843 EVI5O60447 810 aa17.14■□□□□ 0.33
CSNK1A1-202ENST00000377843 ARID4AP29374 1257 aaPredicted RBP17.14■□□□□ 0.33
CSNK1A1-202ENST00000377843 CABP4P57796 275 aa17.14■□□□□ 0.33
CSNK1A1-202ENST00000377843 SLMAPQ14BN4 828 aa17.14■□□□□ 0.33
CSNK1A1-202ENST00000377843 TMTC3Q6ZXV5 915 aa17.14■□□□□ 0.33
CSNK1A1-202ENST00000377843 SELENOSQ9BQE4 189 aa17.14■□□□□ 0.33
CSNK1A1-202ENST00000377843 CELF4Q9BZC1 486 aaKnown RBP17.14■□□□□ 0.33
CSNK1A1-202ENST00000377843 TRIM9Q9C026 710 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms