RNA–Protein interactions for RNA: ENST00000377344.6

CBWD3-203, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-203ENST00000377344 TXLNAP40222 546 aa14.59□□□□□ -0.07
CBWD3-203ENST00000377344 UBA7P41226 1012 aa14.59□□□□□ -0.07
CBWD3-203ENST00000377344 PDIA5Q14554 519 aa14.59□□□□□ -0.07
CBWD3-203ENST00000377344 GPT2Q8TD30 523 aa14.59□□□□□ -0.07
CBWD3-203ENST00000377344 AK8Q96MA6 479 aa14.59□□□□□ -0.07
CBWD3-203ENST00000377344 PANK2Q9BZ23 570 aa14.59□□□□□ -0.07
CBWD3-203ENST00000377344 VTA1Q9NP79 307 aa14.59□□□□□ -0.07
CBWD3-203ENST00000377344 PDGFCQ9NRA1 345 aa14.59□□□□□ -0.07
CBWD3-203ENST00000377344 ZHX1Q9UKY1 873 aaPredicted RBP14.59□□□□□ -0.07
CBWD3-203ENST00000377344 KIAA1217Q5T5P2 1943 aa14.58□□□□□ -0.08
CBWD3-203ENST00000377344 MBD3O95983 291 aa14.58□□□□□ -0.08
CBWD3-203ENST00000377344 XRCC5P13010 732 aaKnown RBP14.58□□□□□ -0.08
CBWD3-203ENST00000377344 LIG1P18858 919 aa14.58□□□□□ -0.08
CBWD3-203ENST00000377344 ICAM3P32942 547 aa14.58□□□□□ -0.08
CBWD3-203ENST00000377344 CYP2C19P33261 490 aa14.58□□□□□ -0.08
CBWD3-203ENST00000377344 NDUFA8P51970 172 aa14.58□□□□□ -0.08
CBWD3-203ENST00000377344 SP4Q02446 784 aa14.58□□□□□ -0.08
CBWD3-203ENST00000377344 LY6KQ17RY6 165 aa14.58□□□□□ -0.08
CBWD3-203ENST00000377344 OLFML2BQ68BL8 750 aa14.58□□□□□ -0.08
CBWD3-203ENST00000377344 OTOP1Q7RTM1 612 aa14.58□□□□□ -0.08
CBWD3-203ENST00000377344 ABHD16BQ9H3Z7 469 aa14.58□□□□□ -0.08
CBWD3-203ENST00000377344 SRRDQ9UH36 339 aa14.58□□□□□ -0.08
CBWD3-203ENST00000377344 VAV3Q9UKW4 847 aa14.58□□□□□ -0.08
CBWD3-203ENST00000377344 DHX15O43143 795 aaKnown RBP14.57□□□□□ -0.08
CBWD3-203ENST00000377344 TXNP10599 105 aaKnown RBP14.57□□□□□ -0.08
CBWD3-203ENST00000377344 TGFB3P10600 412 aa14.57□□□□□ -0.08
CBWD3-203ENST00000377344 KCNA2P16389 499 aa14.57□□□□□ -0.08
CBWD3-203ENST00000377344 SP2Q02086 613 aa14.57□□□□□ -0.08
CBWD3-203ENST00000377344 SPIRE1Q08AE8 756 aa14.57□□□□□ -0.08
CBWD3-203ENST00000377344 ACVR2BQ13705 512 aa14.57□□□□□ -0.08
CBWD3-203ENST00000377344 TTLL4Q14679 1199 aa14.57□□□□□ -0.08
CBWD3-203ENST00000377344 KRT79Q5XKE5 535 aa14.57□□□□□ -0.08
CBWD3-203ENST00000377344 KCNV1Q6PIU1 500 aa14.57□□□□□ -0.08
CBWD3-203ENST00000377344 CYFIP1Q7L576 1253 aa14.57□□□□□ -0.08
CBWD3-203ENST00000377344 PDILTQ8N807 584 aa14.57□□□□□ -0.08
CBWD3-203ENST00000377344 SCFD2Q8WU76 684 aa14.57□□□□□ -0.08
CBWD3-203ENST00000377344 UNC45AQ9H3U1 944 aa14.57□□□□□ -0.08
CBWD3-203ENST00000377344 SAMM50Q9Y512 469 aa14.57□□□□□ -0.08
CBWD3-203ENST00000377344 TRAK2O60296 914 aa14.57□□□□□ -0.08
CBWD3-203ENST00000377344 ARIH2O95376 493 aa14.57□□□□□ -0.08
CBWD3-203ENST00000377344 GNRH1P01148 92 aa14.57□□□□□ -0.08
CBWD3-203ENST00000377344 UBA1P22314 1058 aaKnown RBP14.57□□□□□ -0.08
CBWD3-203ENST00000377344 PPP2R5CQ13362 524 aa14.57□□□□□ -0.08
CBWD3-203ENST00000377344 NEDD9Q14511 834 aa14.57□□□□□ -0.08
CBWD3-203ENST00000377344 SKOR2Q2VWA4 1001 aaPredicted RBP14.57□□□□□ -0.08
CBWD3-203ENST00000377344 PRAMEF19Q5SWL8 479 aa14.57□□□□□ -0.08
CBWD3-203ENST00000377344 CABP7Q86V35 215 aa14.57□□□□□ -0.08
CBWD3-203ENST00000377344 ERMNQ8TAM6 284 aa14.57□□□□□ -0.08
CBWD3-203ENST00000377344 RAET1EQ8TD07 263 aa14.57□□□□□ -0.08
CBWD3-203ENST00000377344 SNX29Q8TEQ0 813 aa14.57□□□□□ -0.08
CBWD3-203ENST00000377344 BCAS3Q9H6U6 928 aa14.57□□□□□ -0.08
CBWD3-203ENST00000377344 JPH1Q9HDC5 661 aaPredicted RBP14.57□□□□□ -0.08
CBWD3-203ENST00000377344 KCNH3Q9ULD8 1083 aa14.57□□□□□ -0.08
CBWD3-203ENST00000377344 NFASCO94856 1347 aa14.56□□□□□ -0.08
CBWD3-203ENST00000377344 EML1O00423 815 aa14.56□□□□□ -0.08
CBWD3-203ENST00000377344 NR1I2O75469 434 aa14.56□□□□□ -0.08
CBWD3-203ENST00000377344 ADCYAP1R1P41586 468 aa14.56□□□□□ -0.08
CBWD3-203ENST00000377344 SYKP43405 635 aa14.56□□□□□ -0.08
CBWD3-203ENST00000377344 KRT76Q01546 638 aa14.56□□□□□ -0.08
CBWD3-203ENST00000377344 FAM160A1Q05DH4 1040 aa14.56□□□□□ -0.08
CBWD3-203ENST00000377344 KARSQ15046 597 aaKnown RBP14.56□□□□□ -0.08
CBWD3-203ENST00000377344 MFSD14CQ5VZR4 134 aa14.56□□□□□ -0.08
CBWD3-203ENST00000377344 TAPT1Q6NXT6 567 aa14.56□□□□□ -0.08
CBWD3-203ENST00000377344 MIER3Q7Z3K6 550 aa14.56□□□□□ -0.08
CBWD3-203ENST00000377344 GIMAP8Q8ND71 665 aaPredicted RBP14.56□□□□□ -0.08
CBWD3-203ENST00000377344 TRIB2Q92519 343 aa14.56□□□□□ -0.08
CBWD3-203ENST00000377344 CDK5RAP3Q96JB5 506 aa14.56□□□□□ -0.08
CBWD3-203ENST00000377344 PLIN2Q99541 437 aa14.56□□□□□ -0.08
CBWD3-203ENST00000377344 SENP7Q9BQF6 1050 aa14.56□□□□□ -0.08
CBWD3-203ENST00000377344 KATNBL1Q9H079 304 aa14.56□□□□□ -0.08
CBWD3-203ENST00000377344 MLXIPQ9HAP2 919 aa14.56□□□□□ -0.08
CBWD3-203ENST00000377344 DACT1Q9NYF0 836 aa14.56□□□□□ -0.08
CBWD3-203ENST00000377344 SLC9A2Q9UBY0 812 aa14.56□□□□□ -0.08
CBWD3-203ENST00000377344 DDX41Q9UJV9 622 aaKnown RBP14.56□□□□□ -0.08
CBWD3-203ENST00000377344 POLR2DO15514 142 aaKnown RBP14.55□□□□□ -0.08
CBWD3-203ENST00000377344 GGPS1O95749 300 aa14.55□□□□□ -0.08
CBWD3-203ENST00000377344 ELNP15502 786 aa14.55□□□□□ -0.08
CBWD3-203ENST00000377344 CCT6AP40227 531 aaKnown RBP14.55□□□□□ -0.08
CBWD3-203ENST00000377344 HAUS3Q68CZ6 603 aa14.55□□□□□ -0.08
CBWD3-203ENST00000377344 DHX37Q8IY37 1157 aaKnown RBP14.55□□□□□ -0.08
CBWD3-203ENST00000377344 CALML4Q96GE6 196 aa14.55□□□□□ -0.08
CBWD3-203ENST00000377344 CCDC39Q9UFE4 941 aa14.55□□□□□ -0.08
CBWD3-203ENST00000377344 HPSEQ9Y251 543 aa14.55□□□□□ -0.08
CBWD3-203ENST00000377344 TRIM17Q9Y577 477 aa14.55□□□□□ -0.08
CBWD3-203ENST00000377344 KLHL40Q2TBA0 621 aa14.55□□□□□ -0.08
CBWD3-203ENST00000377344 CCDC144BQ3MJ40 725 aa14.55□□□□□ -0.08
CBWD3-203ENST00000377344 TMEM63BQ5T3F8 832 aa14.55□□□□□ -0.08
CBWD3-203ENST00000377344 TRMT44Q8IYL2 757 aaKnown RBP14.55□□□□□ -0.08
CBWD3-203ENST00000377344 COPS5Q92905 334 aa14.55□□□□□ -0.08
CBWD3-203ENST00000377344 MMTAG2Q9BU76 263 aaKnown RBP14.55□□□□□ -0.08
CBWD3-203ENST00000377344 CCSER1Q9C0I3 900 aa14.55□□□□□ -0.08
CBWD3-203ENST00000377344 DOCK5Q9H7D0 1870 aa14.54□□□□□ -0.08
CBWD3-203ENST00000377344 A0A087X0B3 334 aa14.54□□□□□ -0.08
CBWD3-203ENST00000377344 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.54□□□□□ -0.08
CBWD3-203ENST00000377344 WDR64B1ANS9 1081 aa14.54□□□□□ -0.08
CBWD3-203ENST00000377344 ADCY3O60266 1144 aa14.54□□□□□ -0.08
CBWD3-203ENST00000377344 KINO60870 393 aaKnown RBP14.54□□□□□ -0.08
CBWD3-203ENST00000377344 ZNF202O95125 648 aa14.54□□□□□ -0.08
CBWD3-203ENST00000377344 CCNE2O96020 404 aa14.54□□□□□ -0.08
CBWD3-203ENST00000377344 JAK3P52333 1124 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms