RNA–Protein interactions for RNA: ENST00000377298.8

CLSTN1-202, Transcript of calsyntenin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN1, Length 5,221 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-202ENST00000377298 PLCB1Q9NQ66 1216 aa19.5■□□□□ 0.71
CLSTN1-202ENST00000377298 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.5■□□□□ 0.71
CLSTN1-202ENST00000377298 GABPAQ06546 454 aa19.5■□□□□ 0.71
CLSTN1-202ENST00000377298 NLRP7Q8WX94 980 aa19.5■□□□□ 0.71
CLSTN1-202ENST00000377298 ALDH8A1Q9H2A2 487 aaPredicted RBP19.5■□□□□ 0.71
CLSTN1-202ENST00000377298 F5H6K3 240 aa19.49■□□□□ 0.71
CLSTN1-202ENST00000377298 KLRC3Q07444 240 aa19.49■□□□□ 0.71
CLSTN1-202ENST00000377298 MKRN3Q13064 507 aaKnown RBP19.49■□□□□ 0.71
CLSTN1-202ENST00000377298 TSC1Q92574 1164 aa19.49■□□□□ 0.71
CLSTN1-202ENST00000377298 FAM20AQ96MK3 541 aa19.49■□□□□ 0.71
CLSTN1-202ENST00000377298 FAM196BA6NMK8 535 aa19.49■□□□□ 0.71
CLSTN1-202ENST00000377298 ZSCAN20P17040 1043 aaPredicted RBP19.49■□□□□ 0.71
CLSTN1-202ENST00000377298 SGMS1Q86VZ5 419 aa19.49■□□□□ 0.71
CLSTN1-202ENST00000377298 LINC00116Q8NCU8 138 aa19.49■□□□□ 0.71
CLSTN1-202ENST00000377298 DDX41Q9UJV9 622 aaKnown RBP19.49■□□□□ 0.71
CLSTN1-202ENST00000377298 MYO1FO00160 1098 aa19.49■□□□□ 0.71
CLSTN1-202ENST00000377298 CTTNQ14247 550 aaKnown RBP19.49■□□□□ 0.71
CLSTN1-202ENST00000377298 FYB2Q5VWT5 728 aa19.49■□□□□ 0.71
CLSTN1-202ENST00000377298 NSUN4Q96CB9 384 aaKnown RBP19.49■□□□□ 0.71
CLSTN1-202ENST00000377298 TBC1D22BQ9NU19 505 aa19.49■□□□□ 0.71
CLSTN1-202ENST00000377298 COBLO75128 1261 aa19.49■□□□□ 0.71
CLSTN1-202ENST00000377298 MTMR1Q13613 665 aa19.49■□□□□ 0.71
CLSTN1-202ENST00000377298 PPP2R5DQ14738 602 aa19.49■□□□□ 0.71
CLSTN1-202ENST00000377298 GEN1Q17RS7 908 aa19.49■□□□□ 0.71
CLSTN1-202ENST00000377298 TSGA10IPQ3SY00 556 aa19.49■□□□□ 0.71
CLSTN1-202ENST00000377298 STRIP1Q5VSL9 837 aa19.49■□□□□ 0.71
CLSTN1-202ENST00000377298 PCIF1Q9H4Z3 704 aa19.49■□□□□ 0.71
CLSTN1-202ENST00000377298 USP42Q9H9J4 1324 aaKnown RBP19.49■□□□□ 0.71
CLSTN1-202ENST00000377298 NMT2O60551 498 aa19.48■□□□□ 0.71
CLSTN1-202ENST00000377298 RESP18Q5W5W9 173 aa19.48■□□□□ 0.71
CLSTN1-202ENST00000377298 MAP7D3Q8IWC1 876 aa19.48■□□□□ 0.71
CLSTN1-202ENST00000377298 GPATCH11Q8N954 259 aa19.48■□□□□ 0.71
CLSTN1-202ENST00000377298 NSUN6Q8TEA1 469 aaKnown RBP19.48■□□□□ 0.71
CLSTN1-202ENST00000377298 ZBTB9Q96C00 473 aa19.48■□□□□ 0.71
CLSTN1-202ENST00000377298 ARHGEF37A1IGU5 675 aa19.48■□□□□ 0.71
CLSTN1-202ENST00000377298 CRCPO75575 148 aa19.48■□□□□ 0.71
CLSTN1-202ENST00000377298 PRPF38AQ8NAV1 312 aaKnown RBP19.48■□□□□ 0.71
CLSTN1-202ENST00000377298 ZNF512BQ96KM6 892 aaPredicted RBP19.48■□□□□ 0.71
CLSTN1-202ENST00000377298 FAM167AQ96KS9 214 aa19.48■□□□□ 0.71
CLSTN1-202ENST00000377298 ZNRF3Q9ULT6 936 aa19.48■□□□□ 0.71
CLSTN1-202ENST00000377298 IRX5P78411 483 aaPredicted RBP19.48■□□□□ 0.71
CLSTN1-202ENST00000377298 INTS8Q75QN2 995 aaKnown RBP19.48■□□□□ 0.71
CLSTN1-202ENST00000377298 P3H4Q92791 437 aa19.48■□□□□ 0.71
CLSTN1-202ENST00000377298 CNTNAP4Q9C0A0 1308 aa19.48■□□□□ 0.71
CLSTN1-202ENST00000377298 SPP2Q13103 211 aa19.48■□□□□ 0.71
CLSTN1-202ENST00000377298 NKX1-1Q15270 411 aaPredicted RBP19.48■□□□□ 0.71
CLSTN1-202ENST00000377298 DENND2CQ68D51 928 aa19.48■□□□□ 0.71
CLSTN1-202ENST00000377298 SLFN12LQ6IEE8 588 aa19.48■□□□□ 0.71
CLSTN1-202ENST00000377298 SNRNP48Q6IEG0 339 aaKnown RBP19.48■□□□□ 0.71
CLSTN1-202ENST00000377298 IFT122Q9HBG6 1241 aa19.48■□□□□ 0.71
CLSTN1-202ENST00000377298 RAVER2Q9HCJ3 691 aaKnown RBP19.48■□□□□ 0.71
CLSTN1-202ENST00000377298 PXDNLA1KZ92 1463 aa19.48■□□□□ 0.71
CLSTN1-202ENST00000377298 MXI1P50539 228 aa19.48■□□□□ 0.71
CLSTN1-202ENST00000377298 TFAMQ00059 246 aaKnown RBP19.48■□□□□ 0.71
CLSTN1-202ENST00000377298 PPFIA1Q13136 1202 aa19.48■□□□□ 0.71
CLSTN1-202ENST00000377298 TCP11Q8WWU5 503 aa19.48■□□□□ 0.71
CLSTN1-202ENST00000377298 GIPC1O14908 333 aa19.47■□□□□ 0.71
CLSTN1-202ENST00000377298 ABL1P00519 1130 aa19.47■□□□□ 0.71
CLSTN1-202ENST00000377298 C12orf60Q5U649 245 aa19.47■□□□□ 0.71
CLSTN1-202ENST00000377298 METTL23Q86XA0 190 aa19.47■□□□□ 0.71
CLSTN1-202ENST00000377298 TECPR2O15040 1411 aa19.47■□□□□ 0.71
CLSTN1-202ENST00000377298 SRGAP1Q7Z6B7 1085 aa19.47■□□□□ 0.71
CLSTN1-202ENST00000377298 VPS37BQ9H9H4 285 aa19.47■□□□□ 0.71
CLSTN1-202ENST00000377298 K7ERI5 159 aa19.47■□□□□ 0.71
CLSTN1-202ENST00000377298 TBC1D8O95759 1140 aa19.47■□□□□ 0.71
CLSTN1-202ENST00000377298 KRT15P19012 456 aa19.47■□□□□ 0.71
CLSTN1-202ENST00000377298 CHRNA5P30532 468 aa19.47■□□□□ 0.71
CLSTN1-202ENST00000377298 GTF2A1P52655 376 aaPredicted RBP19.47■□□□□ 0.71
CLSTN1-202ENST00000377298 RNF146Q9NTX7 359 aa19.47■□□□□ 0.71
CLSTN1-202ENST00000377298 SH3BP5O60239 455 aa19.47■□□□□ 0.71
CLSTN1-202ENST00000377298 BRD3Q15059 726 aa19.47■□□□□ 0.71
CLSTN1-202ENST00000377298 AFAP1L2Q8N4X5 818 aa19.47■□□□□ 0.71
CLSTN1-202ENST00000377298 BARHL2Q9NY43 387 aa19.47■□□□□ 0.71
CLSTN1-202ENST00000377298 WDR64B1ANS9 1081 aa19.46■□□□□ 0.71
CLSTN1-202ENST00000377298 KRT76Q01546 638 aa19.46■□□□□ 0.71
CLSTN1-202ENST00000377298 SMC1BQ8NDV3 1235 aa19.46■□□□□ 0.71
CLSTN1-202ENST00000377298 MCPH1Q8NEM0 835 aa19.46■□□□□ 0.71
CLSTN1-202ENST00000377298 SNX25Q9H3E2 840 aa19.46■□□□□ 0.71
CLSTN1-202ENST00000377298 NCOA3Q9Y6Q9 1424 aa19.46■□□□□ 0.71
CLSTN1-202ENST00000377298 FAM170AA1A519 330 aa19.46■□□□□ 0.71
CLSTN1-202ENST00000377298 PRELPP51888 382 aa19.46■□□□□ 0.71
CLSTN1-202ENST00000377298 NEK9Q8TD19 979 aa19.46■□□□□ 0.71
CLSTN1-202ENST00000377298 KIDINS220Q9ULH0 1771 aa19.46■□□□□ 0.71
CLSTN1-202ENST00000377298 USP17L15C9J2P7 530 aa19.46■□□□□ 0.71
CLSTN1-202ENST00000377298 USP17L13C9JLJ4 530 aa19.46■□□□□ 0.71
CLSTN1-202ENST00000377298 USP17L11C9JVI0 530 aa19.46■□□□□ 0.71
CLSTN1-202ENST00000377298 USP17L18D6R9N7 530 aa19.46■□□□□ 0.71
CLSTN1-202ENST00000377298 USP17L22D6RA61 530 aa19.46■□□□□ 0.71
CLSTN1-202ENST00000377298 USP17L17D6RBQ6 530 aa19.46■□□□□ 0.71
CLSTN1-202ENST00000377298 USP17L19D6RCP7 530 aa19.46■□□□□ 0.71
CLSTN1-202ENST00000377298 USP17L20D6RJB6 530 aa19.46■□□□□ 0.71
CLSTN1-202ENST00000377298 THAP12O43422 761 aa19.46■□□□□ 0.71
CLSTN1-202ENST00000377298 PSMC4P43686 418 aa19.46■□□□□ 0.71
CLSTN1-202ENST00000377298 ARHGAP4P98171 946 aa19.46■□□□□ 0.71
CLSTN1-202ENST00000377298 RASSF7Q02833 373 aa19.46■□□□□ 0.71
CLSTN1-202ENST00000377298 USP17L24Q0WX57 530 aa19.46■□□□□ 0.71
CLSTN1-202ENST00000377298 Q3C1V9 767 aa19.46■□□□□ 0.71
CLSTN1-202ENST00000377298 HHATQ5VTY9 493 aa19.46■□□□□ 0.71
CLSTN1-202ENST00000377298 USP17L6PQ6QN14 398 aa19.46■□□□□ 0.71
CLSTN1-202ENST00000377298 UNC13DQ70J99 1090 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms