RNA–Protein interactions for RNA: ENST00000376839.7

ACTN1-202, Transcript of actinin alpha 1, humanhuman

TSL 2 BASIC

Gene ACTN1, Length 2,824 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-202ENST00000376839 PICALMQ13492 652 aa14.58□□□□□ -0.08
ACTN1-202ENST00000376839 CFAP221Q4G0U5 840 aa14.58□□□□□ -0.08
ACTN1-202ENST00000376839 ASPRV1Q53RT3 343 aa14.58□□□□□ -0.08
ACTN1-202ENST00000376839 TTBK2Q6IQ55 1244 aa14.58□□□□□ -0.08
ACTN1-202ENST00000376839 PACS2Q86VP3 889 aa14.58□□□□□ -0.08
ACTN1-202ENST00000376839 ZIM3Q96PE6 472 aa14.58□□□□□ -0.08
ACTN1-202ENST00000376839 JMJD4Q9H9V9 463 aa14.58□□□□□ -0.08
ACTN1-202ENST00000376839 PPP4R3AQ6IN85 833 aa14.58□□□□□ -0.08
ACTN1-202ENST00000376839 DPP8Q6V1X1 898 aaPredicted RBP14.58□□□□□ -0.08
ACTN1-202ENST00000376839 C15orf52Q6ZUT6 534 aaKnown RBP14.58□□□□□ -0.08
ACTN1-202ENST00000376839 SH2D3CQ8N5H7 860 aa14.58□□□□□ -0.08
ACTN1-202ENST00000376839 NFU1Q9UMS0 254 aa14.58□□□□□ -0.08
ACTN1-202ENST00000376839 ATP6V0A2Q9Y487 856 aa14.58□□□□□ -0.08
ACTN1-202ENST00000376839 A0A087X0T9 212 aa14.57□□□□□ -0.08
ACTN1-202ENST00000376839 OPA1O60313 960 aa14.57□□□□□ -0.08
ACTN1-202ENST00000376839 HSF2BPO75031 334 aa14.57□□□□□ -0.08
ACTN1-202ENST00000376839 HEXIM1O94992 359 aaKnown RBP14.57□□□□□ -0.08
ACTN1-202ENST00000376839 FAM228BP0C875 321 aa14.57□□□□□ -0.08
ACTN1-202ENST00000376839 SNHG28P0DPA3 235 aa14.57□□□□□ -0.08
ACTN1-202ENST00000376839 PLCG2P16885 1265 aa14.57□□□□□ -0.08
ACTN1-202ENST00000376839 RNASE9P60153 205 aaKnown RBP14.57□□□□□ -0.08
ACTN1-202ENST00000376839 RAPGEF1Q13905 1077 aa14.57□□□□□ -0.08
ACTN1-202ENST00000376839 CERS3Q8IU89 383 aa14.57□□□□□ -0.08
ACTN1-202ENST00000376839 TRIM59Q8IWR1 403 aa14.57□□□□□ -0.08
ACTN1-202ENST00000376839 ADGRF4Q8IZF3 695 aa14.57□□□□□ -0.08
ACTN1-202ENST00000376839 LRRC27Q9C0I9 530 aa14.57□□□□□ -0.08
ACTN1-202ENST00000376839 POLD4Q9HCU8 107 aa14.57□□□□□ -0.08
ACTN1-202ENST00000376839 CCNL1Q9UK58 526 aaPredicted RBP14.57□□□□□ -0.08
ACTN1-202ENST00000376839 PCDHA2Q9Y5H9 948 aa14.57□□□□□ -0.08
ACTN1-202ENST00000376839 EIF3HO15372 352 aaKnown RBP eCLIP14.57□□□□□ -0.08
ACTN1-202ENST00000376839 KRT14P02533 472 aa14.57□□□□□ -0.08
ACTN1-202ENST00000376839 EPB41P11171 864 aaKnown RBP14.57□□□□□ -0.08
ACTN1-202ENST00000376839 SLC16A2P36021 539 aa14.57□□□□□ -0.08
ACTN1-202ENST00000376839 CLK2P49760 499 aaKnown RBP14.57□□□□□ -0.08
ACTN1-202ENST00000376839 GUCY2DQ02846 1103 aa14.57□□□□□ -0.08
ACTN1-202ENST00000376839 NAB2Q15742 525 aa14.57□□□□□ -0.08
ACTN1-202ENST00000376839 ALS2CLQ60I27 953 aa14.57□□□□□ -0.08
ACTN1-202ENST00000376839 FOXR2Q6PJQ5 311 aa14.57□□□□□ -0.08
ACTN1-202ENST00000376839 FAM133AQ8N9E0 248 aa14.57□□□□□ -0.08
ACTN1-202ENST00000376839 IFT81Q8WYA0 676 aa14.57□□□□□ -0.08
ACTN1-202ENST00000376839 RUFY1Q96T51 708 aa14.57□□□□□ -0.08
ACTN1-202ENST00000376839 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.57□□□□□ -0.08
ACTN1-202ENST00000376839 EPB41L5Q9HCM4 733 aa14.57□□□□□ -0.08
ACTN1-202ENST00000376839 GDF3Q9NR23 364 aa14.57□□□□□ -0.08
ACTN1-202ENST00000376839 TSKSQ9UJT2 592 aa14.57□□□□□ -0.08
ACTN1-202ENST00000376839 MYH7BA7E2Y1 1941 aa14.57□□□□□ -0.08
ACTN1-202ENST00000376839 MARCH6O60337 910 aa14.56□□□□□ -0.08
ACTN1-202ENST00000376839 IL1R1P14778 569 aa14.56□□□□□ -0.08
ACTN1-202ENST00000376839 TRADDQ15628 312 aa14.56□□□□□ -0.08
ACTN1-202ENST00000376839 KCTD16Q68DU8 428 aa14.56□□□□□ -0.08
ACTN1-202ENST00000376839 CNBD1Q8NA66 436 aa14.56□□□□□ -0.08
ACTN1-202ENST00000376839 BCAS4Q8TDM0 211 aa14.56□□□□□ -0.08
ACTN1-202ENST00000376839 SYN2Q92777 582 aaPredicted RBP14.56□□□□□ -0.08
ACTN1-202ENST00000376839 CCDC43Q96MW1 224 aaKnown RBP14.56□□□□□ -0.08
ACTN1-202ENST00000376839 ADAMTS1Q9UHI8 967 aa14.56□□□□□ -0.08
ACTN1-202ENST00000376839 KIAA1024Q9UPX6 916 aa14.56□□□□□ -0.08
ACTN1-202ENST00000376839 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.56□□□□□ -0.08
ACTN1-202ENST00000376839 PLIN4Q96Q06 1357 aa14.56□□□□□ -0.08
ACTN1-202ENST00000376839 GAKO14976 1311 aa14.56□□□□□ -0.08
ACTN1-202ENST00000376839 PNMA6FA0A0J9YX94 578 aa14.56□□□□□ -0.08
ACTN1-202ENST00000376839 KDM4FA0A1W2PPD8 638 aa14.56□□□□□ -0.08
ACTN1-202ENST00000376839 POTEB3A0JP26 581 aa14.56□□□□□ -0.08
ACTN1-202ENST00000376839 POTECB2RU33 542 aa14.56□□□□□ -0.08
ACTN1-202ENST00000376839 ZNF543Q08ER8 600 aa14.56□□□□□ -0.08
ACTN1-202ENST00000376839 SLC18A3Q16572 532 aa14.56□□□□□ -0.08
ACTN1-202ENST00000376839 GLE1Q53GS7 698 aaKnown RBP14.56□□□□□ -0.08
ACTN1-202ENST00000376839 FAM182BQ5T319 152 aa14.56□□□□□ -0.08
ACTN1-202ENST00000376839 POTEBQ6S5H4 581 aa14.56□□□□□ -0.08
ACTN1-202ENST00000376839 SCFD1Q8WVM8 642 aa14.56□□□□□ -0.08
ACTN1-202ENST00000376839 INPP4AQ96PE3 977 aaPredicted RBP14.56□□□□□ -0.08
ACTN1-202ENST00000376839 KRT12Q99456 494 aa14.56□□□□□ -0.08
ACTN1-202ENST00000376839 PCDHA12Q9UN75 941 aa14.56□□□□□ -0.08
ACTN1-202ENST00000376839 IGKV6D-41A0A0C4DH26 115 aa14.56□□□□□ -0.08
ACTN1-202ENST00000376839 NOP2P46087 812 aaKnown RBP14.56□□□□□ -0.08
ACTN1-202ENST00000376839 GUCY2FP51841 1108 aa14.56□□□□□ -0.08
ACTN1-202ENST00000376839 GABPAQ06546 454 aa14.56□□□□□ -0.08
ACTN1-202ENST00000376839 PDCLQ13371 301 aa14.56□□□□□ -0.08
ACTN1-202ENST00000376839 KIAA0753Q2KHM9 967 aa14.56□□□□□ -0.08
ACTN1-202ENST00000376839 MEI1Q5TIA1 1274 aa14.56□□□□□ -0.08
ACTN1-202ENST00000376839 IFT20Q8IY31 132 aa14.56□□□□□ -0.08
ACTN1-202ENST00000376839 FAM163AQ96GL9 167 aaPredicted RBP14.56□□□□□ -0.08
ACTN1-202ENST00000376839 CEP63Q96MT8 703 aa14.56□□□□□ -0.08
ACTN1-202ENST00000376839 NUCKS1Q9H1E3 243 aaKnown RBP14.56□□□□□ -0.08
ACTN1-202ENST00000376839 KCTD10Q9H3F6 313 aa14.56□□□□□ -0.08
ACTN1-202ENST00000376839 DAGLAQ9Y4D2 1042 aa14.56□□□□□ -0.08
ACTN1-202ENST00000376839 PCDHGC5Q9Y5F6 944 aa14.56□□□□□ -0.08
ACTN1-202ENST00000376839 GRID2IPA4D2P6 1211 aa14.55□□□□□ -0.08
ACTN1-202ENST00000376839 PLA2G4BP0C869 781 aa14.55□□□□□ -0.08
ACTN1-202ENST00000376839 RFC4P35249 363 aa14.55□□□□□ -0.08
ACTN1-202ENST00000376839 TTC31Q49AM3 519 aaPredicted RBP14.55□□□□□ -0.08
ACTN1-202ENST00000376839 HERC4Q5GLZ8 1057 aaPredicted RBP14.55□□□□□ -0.08
ACTN1-202ENST00000376839 GBP6Q6ZN66 633 aa14.55□□□□□ -0.08
ACTN1-202ENST00000376839 ARHGAP27Q6ZUM4 889 aa14.55□□□□□ -0.08
ACTN1-202ENST00000376839 GPBP1Q86WP2 473 aa14.55□□□□□ -0.08
ACTN1-202ENST00000376839 DNAAF5Q86Y56 855 aa14.55□□□□□ -0.08
ACTN1-202ENST00000376839 CASKIN2Q8WXE0 1202 aa14.55□□□□□ -0.08
ACTN1-202ENST00000376839 GANQ9H2C0 597 aa14.55□□□□□ -0.08
ACTN1-202ENST00000376839 ZNF233A6NK53 670 aa14.55□□□□□ -0.08
ACTN1-202ENST00000376839 USP17L10C9JJH3 530 aa14.55□□□□□ -0.08
ACTN1-202ENST00000376839 SLURP2P0DP57 97 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms