RNA–Protein interactions for RNA: ENST00000376490.7

CLCN6-203, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 963 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-203ENST00000376490 RNPC3Q96LT9 517 aaKnown RBP16.32■□□□□ 0.2
CLCN6-203ENST00000376490 CTAGE1Q96RT6 745 aa16.32■□□□□ 0.2
CLCN6-203ENST00000376490 GPR20Q99678 358 aa16.32■□□□□ 0.2
CLCN6-203ENST00000376490 ANO3Q9BYT9 981 aa16.32■□□□□ 0.2
CLCN6-203ENST00000376490 ZMYND12Q9H0C1 365 aa16.32■□□□□ 0.2
CLCN6-203ENST00000376490 GLT8D2Q9H1C3 349 aa16.32■□□□□ 0.2
CLCN6-203ENST00000376490 IL23AQ9NPF7 189 aa16.32■□□□□ 0.2
CLCN6-203ENST00000376490 JADE2Q9NQC1 790 aa16.32■□□□□ 0.2
CLCN6-203ENST00000376490 PKD2L1Q9P0L9 805 aa16.32■□□□□ 0.2
CLCN6-203ENST00000376490 NOD1Q9Y239 953 aa16.32■□□□□ 0.2
CLCN6-203ENST00000376490 SZT2Q5T011 3432 aa16.32■□□□□ 0.2
CLCN6-203ENST00000376490 TANC1Q9C0D5 1861 aa16.31■□□□□ 0.2
CLCN6-203ENST00000376490 H3BRB1 525 aa16.31■□□□□ 0.2
CLCN6-203ENST00000376490 KCNA2P16389 499 aa16.31■□□□□ 0.2
CLCN6-203ENST00000376490 ANAPC15P60006 121 aa16.31■□□□□ 0.2
CLCN6-203ENST00000376490 ZNF200P98182 395 aaPredicted RBP16.31■□□□□ 0.2
CLCN6-203ENST00000376490 MTMR1Q13613 665 aa16.31■□□□□ 0.2
CLCN6-203ENST00000376490 Q7L0L9 218 aa16.31■□□□□ 0.2
CLCN6-203ENST00000376490 TEX2Q8IWB9 1127 aa16.31■□□□□ 0.2
CLCN6-203ENST00000376490 GIMAP8Q8ND71 665 aaPredicted RBP16.31■□□□□ 0.2
CLCN6-203ENST00000376490 MXRA8Q9BRK3 442 aa16.31■□□□□ 0.2
CLCN6-203ENST00000376490 KATNAL1Q9BW62 490 aa16.31■□□□□ 0.2
CLCN6-203ENST00000376490 TUT1Q9H6E5 874 aaKnown RBP16.31■□□□□ 0.2
CLCN6-203ENST00000376490 C6orf50Q9HD87 102 aa16.31■□□□□ 0.2
CLCN6-203ENST00000376490 GTF2IRD1Q9UHL9 959 aa16.31■□□□□ 0.2
CLCN6-203ENST00000376490 MYH9P35579 1960 aaKnown RBP16.3■□□□□ 0.2
CLCN6-203ENST00000376490 ESYT2A0FGR8 921 aa16.3■□□□□ 0.2
CLCN6-203ENST00000376490 LGALS2P05162 132 aa16.3■□□□□ 0.2
CLCN6-203ENST00000376490 ARP10275 920 aa16.3■□□□□ 0.2
CLCN6-203ENST00000376490 SSRP1Q08945 709 aaKnown RBP16.3■□□□□ 0.2
CLCN6-203ENST00000376490 HIC1Q14526 733 aa16.3■□□□□ 0.2
CLCN6-203ENST00000376490 UTP14CQ5TAP6 766 aaKnown RBP16.3■□□□□ 0.2
CLCN6-203ENST00000376490 GPR153Q6NV75 609 aa16.3■□□□□ 0.2
CLCN6-203ENST00000376490 CCDC12Q8WUD4 166 aaPredicted RBP16.3■□□□□ 0.2
CLCN6-203ENST00000376490 VWCEQ96DN2 955 aa16.3■□□□□ 0.2
CLCN6-203ENST00000376490 CDHR1Q96JP9 859 aa16.3■□□□□ 0.2
CLCN6-203ENST00000376490 VPS54Q9P1Q0 977 aa16.3■□□□□ 0.2
CLCN6-203ENST00000376490 GSTTP1A0A1W2PQM5 241 aa16.29■□□□□ 0.2
CLCN6-203ENST00000376490 CPLX1O14810 134 aa16.29■□□□□ 0.2
CLCN6-203ENST00000376490 MAFGO15525 162 aa16.29■□□□□ 0.2
CLCN6-203ENST00000376490 DTNBO60941 627 aa16.29■□□□□ 0.2
CLCN6-203ENST00000376490 FGBP02675 491 aa16.29■□□□□ 0.2
CLCN6-203ENST00000376490 SREBF1P36956 1147 aa16.29■□□□□ 0.2
CLCN6-203ENST00000376490 AP3B2Q13367 1082 aa16.29■□□□□ 0.2
CLCN6-203ENST00000376490 TRIM22Q8IYM9 498 aa16.29■□□□□ 0.2
CLCN6-203ENST00000376490 RPUSD2Q8IZ73 545 aaKnown RBP16.29■□□□□ 0.2
CLCN6-203ENST00000376490 DEFB123Q8N688 67 aa16.29■□□□□ 0.2
CLCN6-203ENST00000376490 RETREG2Q8NC44 543 aa16.29■□□□□ 0.2
CLCN6-203ENST00000376490 KCNH7Q9NS40 1196 aa16.29■□□□□ 0.2
CLCN6-203ENST00000376490 TPCN1Q9ULQ1 816 aa16.29■□□□□ 0.2
CLCN6-203ENST00000376490 MEIS1O00470 390 aa16.28■□□□□ 0.2
CLCN6-203ENST00000376490 IQCF3P0C7M6 154 aa16.28■□□□□ 0.2
CLCN6-203ENST00000376490 GNA11P29992 359 aa16.28■□□□□ 0.2
CLCN6-203ENST00000376490 ZNF76P36508 570 aa16.28■□□□□ 0.2
CLCN6-203ENST00000376490 AK2P54819 239 aa16.28■□□□□ 0.2
CLCN6-203ENST00000376490 ARHGAP4P98171 946 aa16.28■□□□□ 0.2
CLCN6-203ENST00000376490 SCRN1Q12765 414 aa16.28■□□□□ 0.2
CLCN6-203ENST00000376490 BFSP2Q13515 415 aa16.28■□□□□ 0.2
CLCN6-203ENST00000376490 CEP55Q53EZ4 464 aa16.28■□□□□ 0.2
CLCN6-203ENST00000376490 PSRC1Q6PGN9 363 aaPredicted RBP16.28■□□□□ 0.2
CLCN6-203ENST00000376490 OTOP2Q7RTS6 562 aa16.28■□□□□ 0.2
CLCN6-203ENST00000376490 DEFB128Q7Z7B8 93 aa16.28■□□□□ 0.2
CLCN6-203ENST00000376490 TRIM50Q86XT4 487 aa16.28■□□□□ 0.2
CLCN6-203ENST00000376490 REXO1Q8N1G1 1221 aaKnown RBP16.28■□□□□ 0.2
CLCN6-203ENST00000376490 RASGRP4Q8TDF6 673 aa16.28■□□□□ 0.2
CLCN6-203ENST00000376490 DHX38Q92620 1227 aaKnown RBP16.28■□□□□ 0.2
CLCN6-203ENST00000376490 IL17RAQ96F46 866 aa16.28■□□□□ 0.2
CLCN6-203ENST00000376490 SLKQ9H2G2 1235 aaPredicted RBP16.28■□□□□ 0.2
CLCN6-203ENST00000376490 RNPEPQ9H4A4 650 aa16.28■□□□□ 0.2
CLCN6-203ENST00000376490 LAMA3Q16787 3333 aa16.27■□□□□ 0.2
CLCN6-203ENST00000376490 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.27■□□□□ 0.2
CLCN6-203ENST00000376490 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.27■□□□□ 0.2
CLCN6-203ENST00000376490 RBAK-RBAKDNI3L0D1 243 aa16.27■□□□□ 0.2
CLCN6-203ENST00000376490 PITPNM1O00562 1244 aa16.27■□□□□ 0.2
CLCN6-203ENST00000376490 EIF5BO60841 1220 aaKnown RBP16.27■□□□□ 0.2
CLCN6-203ENST00000376490 SMIM10L2AP0DMW4 78 aa16.27■□□□□ 0.2
CLCN6-203ENST00000376490 SMIM10L2BP0DMW5 78 aa16.27■□□□□ 0.2
CLCN6-203ENST00000376490 TCF7P36402 384 aaPredicted RBP16.27■□□□□ 0.2
CLCN6-203ENST00000376490 SMAD3P84022 425 aaKnown RBP16.27■□□□□ 0.2
CLCN6-203ENST00000376490 RASIP1Q5U651 963 aa16.27■□□□□ 0.2
CLCN6-203ENST00000376490 FAM109BQ6ICB4 259 aaPredicted RBP16.27■□□□□ 0.2
CLCN6-203ENST00000376490 CRYGNQ8WXF5 182 aa16.27■□□□□ 0.2
CLCN6-203ENST00000376490 SEPT1Q8WYJ6 367 aa16.27■□□□□ 0.2
CLCN6-203ENST00000376490 HERVK_113Q902F9 699 aa16.27■□□□□ 0.2
CLCN6-203ENST00000376490 AIFM3Q96NN9 605 aa16.27■□□□□ 0.2
CLCN6-203ENST00000376490 SH3GLB2Q9NR46 395 aa16.27■□□□□ 0.2
CLCN6-203ENST00000376490 CXXC1Q9P0U4 656 aaPredicted RBP16.27■□□□□ 0.2
CLCN6-203ENST00000376490 MYO9BQ13459 2157 aa16.27■□□□□ 0.19
CLCN6-203ENST00000376490 LOXHD1Q8IVV2 1947 aa16.27■□□□□ 0.19
CLCN6-203ENST00000376490 GRXCR1A8MXD5 290 aa16.26■□□□□ 0.19
CLCN6-203ENST00000376490 FAM86B1E9PN63 330 aa16.26■□□□□ 0.19
CLCN6-203ENST00000376490 PFKFB2O60825 505 aa16.26■□□□□ 0.19
CLCN6-203ENST00000376490 DEXIO95424 95 aa16.26■□□□□ 0.19
CLCN6-203ENST00000376490 CYP3A4P08684 503 aa16.26■□□□□ 0.19
CLCN6-203ENST00000376490 FAM86B2P0C5J1 330 aa16.26■□□□□ 0.19
CLCN6-203ENST00000376490 NEK4P51957 841 aa16.26■□□□□ 0.19
CLCN6-203ENST00000376490 NLRP5P59047 1200 aa16.26■□□□□ 0.19
CLCN6-203ENST00000376490 PTK7Q13308 1070 aa16.26■□□□□ 0.19
CLCN6-203ENST00000376490 MCTP2Q6DN12 878 aa16.26■□□□□ 0.19
CLCN6-203ENST00000376490 CPLX2Q6PUV4 134 aaKnown RBP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms