RNA–Protein interactions for RNA: ENST00000376387.4

TM9SF2-201, Transcript of transmembrane 9 superfamily member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2-201ENST00000376387 ITFG2Q969R8 447 aa12.64□□□□□ -0.39
TM9SF2-201ENST00000376387 TCP11L1Q9NUJ3 509 aa12.64□□□□□ -0.39
TM9SF2-201ENST00000376387 HAUS2Q9NVX0 235 aa12.64□□□□□ -0.39
TM9SF2-201ENST00000376387 MAD2L2Q9UI95 211 aa12.64□□□□□ -0.39
TM9SF2-201ENST00000376387 USP17L3A6NCW0 530 aa12.64□□□□□ -0.39
TM9SF2-201ENST00000376387 USP17L4A6NCW7 530 aa12.64□□□□□ -0.39
TM9SF2-201ENST00000376387 A6NNZ2 444 aa12.64□□□□□ -0.39
TM9SF2-201ENST00000376387 STXBP3O00186 592 aa12.64□□□□□ -0.39
TM9SF2-201ENST00000376387 OPLAHO14841 1288 aa12.64□□□□□ -0.39
TM9SF2-201ENST00000376387 ORC4O43929 436 aa12.64□□□□□ -0.39
TM9SF2-201ENST00000376387 ECM2O94769 699 aaPredicted RBP12.64□□□□□ -0.39
TM9SF2-201ENST00000376387 USP17L8P0C7I0 530 aa12.64□□□□□ -0.39
TM9SF2-201ENST00000376387 BYSLQ13895 437 aaKnown RBP12.64□□□□□ -0.39
TM9SF2-201ENST00000376387 HLTFQ14527 1009 aaKnown RBP eCLIP12.64□□□□□ -0.39
TM9SF2-201ENST00000376387 ZRSR2Q15696 482 aaKnown RBP12.64□□□□□ -0.39
TM9SF2-201ENST00000376387 TUBB8Q3ZCM7 444 aa12.64□□□□□ -0.39
TM9SF2-201ENST00000376387 USP17L1Q7RTZ2 530 aa12.64□□□□□ -0.39
TM9SF2-201ENST00000376387 PNMA1Q8ND90 353 aa12.64□□□□□ -0.39
TM9SF2-201ENST00000376387 TBC1D5Q92609 795 aa12.64□□□□□ -0.39
TM9SF2-201ENST00000376387 DYNLL2Q96FJ2 89 aa12.64□□□□□ -0.39
TM9SF2-201ENST00000376387 MCM8Q9UJA3 840 aa12.64□□□□□ -0.39
TM9SF2-201ENST00000376387 H0YGN5 161 aa12.63□□□□□ -0.39
TM9SF2-201ENST00000376387 CHUKO15111 745 aa12.63□□□□□ -0.39
TM9SF2-201ENST00000376387 OR52Z1P0C646 297 aa12.63□□□□□ -0.39
TM9SF2-201ENST00000376387 TFAP4Q01664 338 aa12.63□□□□□ -0.39
TM9SF2-201ENST00000376387 MEI1Q5TIA1 1274 aa12.63□□□□□ -0.39
TM9SF2-201ENST00000376387 LRRC55Q6ZSA7 311 aa12.63□□□□□ -0.39
TM9SF2-201ENST00000376387 RMI1Q9H9A7 625 aa12.63□□□□□ -0.39
TM9SF2-201ENST00000376387 A1CFQ9NQ94 594 aaKnown RBP12.63□□□□□ -0.39
TM9SF2-201ENST00000376387 NFS1Q9Y697 457 aa12.63□□□□□ -0.39
TM9SF2-201ENST00000376387 A0A087X0T9 212 aa12.63□□□□□ -0.39
TM9SF2-201ENST00000376387 HMGB1P1B2RPK0 211 aaPredicted RBP12.63□□□□□ -0.39
TM9SF2-201ENST00000376387 FAM228BP0C875 321 aa12.63□□□□□ -0.39
TM9SF2-201ENST00000376387 HSPA9P38646 679 aaKnown RBP12.63□□□□□ -0.39
TM9SF2-201ENST00000376387 CNNM4Q6P4Q7 775 aa12.63□□□□□ -0.39
TM9SF2-201ENST00000376387 VTI1AQ96AJ9 217 aa12.63□□□□□ -0.39
TM9SF2-201ENST00000376387 CCDC114Q96M63 670 aa12.63□□□□□ -0.39
TM9SF2-201ENST00000376387 AP1M1Q9BXS5 423 aa12.63□□□□□ -0.39
TM9SF2-201ENST00000376387 BLOC1S4Q9NUP1 217 aa12.63□□□□□ -0.39
TM9SF2-201ENST00000376387 ZNF804BA4D1E1 1349 aa12.63□□□□□ -0.39
TM9SF2-201ENST00000376387 GRID2IPA4D2P6 1211 aa12.63□□□□□ -0.39
TM9SF2-201ENST00000376387 ZNF844Q08AG5 666 aa12.63□□□□□ -0.39
TM9SF2-201ENST00000376387 NAB2Q15742 525 aa12.63□□□□□ -0.39
TM9SF2-201ENST00000376387 ARMC3Q5W041 872 aa12.63□□□□□ -0.39
TM9SF2-201ENST00000376387 C3orf67Q6ZVT6 689 aa12.63□□□□□ -0.39
TM9SF2-201ENST00000376387 CCDC47Q96A33 483 aaKnown RBP12.63□□□□□ -0.39
TM9SF2-201ENST00000376387 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.63□□□□□ -0.39
TM9SF2-201ENST00000376387 DONSONQ9NYP3 566 aa12.63□□□□□ -0.39
TM9SF2-201ENST00000376387 CASZ1Q86V15 1759 aa12.63□□□□□ -0.39
TM9SF2-201ENST00000376387 ITGB4P16144 1822 aa12.62□□□□□ -0.39
TM9SF2-201ENST00000376387 KIF5BP33176 963 aa12.62□□□□□ -0.39
TM9SF2-201ENST00000376387 PREPLQ4J6C6 727 aaPredicted RBP12.62□□□□□ -0.39
TM9SF2-201ENST00000376387 CEP57Q86XR8 500 aa12.62□□□□□ -0.39
TM9SF2-201ENST00000376387 RNF10Q8N5U6 811 aaKnown RBP12.62□□□□□ -0.39
TM9SF2-201ENST00000376387 USP38Q8NB14 1042 aa12.62□□□□□ -0.39
TM9SF2-201ENST00000376387 NUDT12Q9BQG2 462 aa12.62□□□□□ -0.39
TM9SF2-201ENST00000376387 PPP1R1BQ9UD71 204 aaPredicted RBP12.62□□□□□ -0.39
TM9SF2-201ENST00000376387 SLC12A6Q9UHW9 1150 aa12.62□□□□□ -0.39
TM9SF2-201ENST00000376387 LEMD3Q9Y2U8 911 aa12.62□□□□□ -0.39
TM9SF2-201ENST00000376387 MYH4Q9Y623 1939 aa12.62□□□□□ -0.39
TM9SF2-201ENST00000376387 GMNCA6NCL1 334 aa12.62□□□□□ -0.39
TM9SF2-201ENST00000376387 MYBP10242 640 aa12.62□□□□□ -0.39
TM9SF2-201ENST00000376387 TXKP42681 527 aa12.62□□□□□ -0.39
TM9SF2-201ENST00000376387 POLR2FP61218 127 aaKnown RBP12.62□□□□□ -0.39
TM9SF2-201ENST00000376387 GRB10Q13322 594 aa12.62□□□□□ -0.39
TM9SF2-201ENST00000376387 TTC30AQ86WT1 665 aa12.62□□□□□ -0.39
TM9SF2-201ENST00000376387 WHAMMQ8TF30 809 aa12.62□□□□□ -0.39
TM9SF2-201ENST00000376387 NSUN4Q96CB9 384 aaKnown RBP12.62□□□□□ -0.39
TM9SF2-201ENST00000376387 FGFBP2Q9BYJ0 223 aa12.62□□□□□ -0.39
TM9SF2-201ENST00000376387 SH3GLB2Q9NR46 395 aa12.62□□□□□ -0.39
TM9SF2-201ENST00000376387 ADAMTS1Q9UHI8 967 aa12.62□□□□□ -0.39
TM9SF2-201ENST00000376387 COL22A1Q8NFW1 1626 aaPredicted RBP12.62□□□□□ -0.39
TM9SF2-201ENST00000376387 RBAK-RBAKDNI3L0D1 243 aa12.62□□□□□ -0.39
TM9SF2-201ENST00000376387 KCNK3O14649 394 aa12.62□□□□□ -0.39
TM9SF2-201ENST00000376387 RDXP35241 583 aaKnown RBP12.62□□□□□ -0.39
TM9SF2-201ENST00000376387 E2F5Q15329 346 aa12.62□□□□□ -0.39
TM9SF2-201ENST00000376387 KIAA0753Q2KHM9 967 aa12.62□□□□□ -0.39
TM9SF2-201ENST00000376387 CCDC152Q4G0S7 254 aa12.62□□□□□ -0.39
TM9SF2-201ENST00000376387 FAM83BQ5T0W9 1011 aa12.62□□□□□ -0.39
TM9SF2-201ENST00000376387 PPP4R3AQ6IN85 833 aa12.62□□□□□ -0.39
TM9SF2-201ENST00000376387 CYB5D1Q6P9G0 228 aa12.62□□□□□ -0.39
TM9SF2-201ENST00000376387 CCDC121Q6ZUS5 278 aa12.62□□□□□ -0.39
TM9SF2-201ENST00000376387 CCDC84Q86UT8 332 aaPredicted RBP12.62□□□□□ -0.39
TM9SF2-201ENST00000376387 KIRREL3Q8IZU9 778 aa12.62□□□□□ -0.39
TM9SF2-201ENST00000376387 FUKQ8N0W3 1084 aa12.62□□□□□ -0.39
TM9SF2-201ENST00000376387 GIMAP7Q8NHV1 300 aa12.62□□□□□ -0.39
TM9SF2-201ENST00000376387 N4BP2L2Q92802 583 aaPredicted RBP12.62□□□□□ -0.39
TM9SF2-201ENST00000376387 PNMA5Q96PV4 448 aa12.62□□□□□ -0.39
TM9SF2-201ENST00000376387 TAF1DQ9H5J8 278 aaPredicted RBP12.62□□□□□ -0.39
TM9SF2-201ENST00000376387 PLCB1Q9NQ66 1216 aa12.62□□□□□ -0.39
TM9SF2-201ENST00000376387 BARHL2Q9NY43 387 aa12.62□□□□□ -0.39
TM9SF2-201ENST00000376387 PHF20L1A8MW92 1017 aa12.61□□□□□ -0.39
TM9SF2-201ENST00000376387 ERVV-1B6SEH8 477 aa12.61□□□□□ -0.39
TM9SF2-201ENST00000376387 PRPHP41219 470 aa12.61□□□□□ -0.39
TM9SF2-201ENST00000376387 KCNK18Q7Z418 384 aa12.61□□□□□ -0.39
TM9SF2-201ENST00000376387 LSM14BQ9BX40 385 aaKnown RBP12.61□□□□□ -0.39
TM9SF2-201ENST00000376387 CUEDC2Q9H467 287 aa12.61□□□□□ -0.39
TM9SF2-201ENST00000376387 TMEM260Q9NX78 707 aa12.61□□□□□ -0.39
TM9SF2-201ENST00000376387 SSU72P8A0A1W2PR75 194 aa12.61□□□□□ -0.39
TM9SF2-201ENST00000376387 FAM170AA1A519 330 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms