RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 AGPAT5Q9NUQ2 364 aa7.13□□□□□ -1.27
SMC1A-202ENST00000375340 ANKFY1Q9P2R3 1169 aa7.13□□□□□ -1.27
SMC1A-202ENST00000375340 MEGF6O75095 1541 aa7.13□□□□□ -1.27
SMC1A-202ENST00000375340 TESPA1A2RU30 521 aaPredicted RBP7.13□□□□□ -1.27
SMC1A-202ENST00000375340 STAMBPO95630 424 aa7.13□□□□□ -1.27
SMC1A-202ENST00000375340 POLR2MP0CAP2 368 aa7.13□□□□□ -1.27
SMC1A-202ENST00000375340 GRM4Q14833 912 aa7.13□□□□□ -1.27
SMC1A-202ENST00000375340 MCUR1Q96AQ8 359 aa7.13□□□□□ -1.27
SMC1A-202ENST00000375340 PPP1R12CQ9BZL4 782 aa7.13□□□□□ -1.27
SMC1A-202ENST00000375340 EMILIN3Q9NT22 766 aa7.13□□□□□ -1.27
SMC1A-202ENST00000375340 PARP2Q9UGN5 583 aa7.13□□□□□ -1.27
SMC1A-202ENST00000375340 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.13□□□□□ -1.27
SMC1A-202ENST00000375340 E9PMD0 336 aa7.13□□□□□ -1.27
SMC1A-202ENST00000375340 H2AFZP0C0S5 128 aa7.13□□□□□ -1.27
SMC1A-202ENST00000375340 RBM43Q6ZSC3 357 aaKnown RBP7.13□□□□□ -1.27
SMC1A-202ENST00000375340 H2AFVQ71UI9 128 aa7.13□□□□□ -1.27
SMC1A-202ENST00000375340 CDHR2Q9BYE9 1310 aa7.13□□□□□ -1.27
SMC1A-202ENST00000375340 ERVV-1B6SEH8 477 aa7.13□□□□□ -1.27
SMC1A-202ENST00000375340 FGGP02679 453 aa7.13□□□□□ -1.27
SMC1A-202ENST00000375340 SSTR3P32745 418 aaPredicted RBP7.13□□□□□ -1.27
SMC1A-202ENST00000375340 MAGEA9P43362 315 aa7.13□□□□□ -1.27
SMC1A-202ENST00000375340 ATP2C1P98194 919 aaPredicted RBP7.13□□□□□ -1.27
SMC1A-202ENST00000375340 CDC37Q16543 378 aaPredicted RBP7.13□□□□□ -1.27
SMC1A-202ENST00000375340 CFAP157Q5JU67 520 aa7.13□□□□□ -1.27
SMC1A-202ENST00000375340 ZNF354CQ86Y25 554 aa7.13□□□□□ -1.27
SMC1A-202ENST00000375340 CDCA7Q9BWT1 371 aaPredicted RBP7.13□□□□□ -1.27
SMC1A-202ENST00000375340 ALDH3A1P30838 453 aa7.13□□□□□ -1.27
SMC1A-202ENST00000375340 ASPRV1Q53RT3 343 aa7.13□□□□□ -1.27
SMC1A-202ENST00000375340 BEND6Q5SZJ8 279 aaPredicted RBP7.13□□□□□ -1.27
SMC1A-202ENST00000375340 LRCH2Q5VUJ6 765 aa7.13□□□□□ -1.27
SMC1A-202ENST00000375340 DCUN1D2Q6PH85 259 aa7.13□□□□□ -1.27
SMC1A-202ENST00000375340 PIGOQ8TEQ8 1089 aa7.13□□□□□ -1.27
SMC1A-202ENST00000375340 TEKT1Q969V4 418 aa7.13□□□□□ -1.27
SMC1A-202ENST00000375340 EHD2Q9NZN4 543 aa7.13□□□□□ -1.27
SMC1A-202ENST00000375340 FAM169AQ9Y6X4 670 aa7.13□□□□□ -1.27
SMC1A-202ENST00000375340 CYP19A1P11511 503 aaPredicted RBP7.13□□□□□ -1.27
SMC1A-202ENST00000375340 TRPC3Q13507 836 aa7.13□□□□□ -1.27
SMC1A-202ENST00000375340 ODR4Q5SWX8 454 aa7.13□□□□□ -1.27
SMC1A-202ENST00000375340 ARL6IP4Q66PJ3 421 aaKnown RBP7.13□□□□□ -1.27
SMC1A-202ENST00000375340 COL15A1P39059 1388 aa7.12□□□□□ -1.27
SMC1A-202ENST00000375340 PPP1R3GB7ZBB8 358 aa7.12□□□□□ -1.27
SMC1A-202ENST00000375340 FMNL3Q8IVF7 1028 aa7.12□□□□□ -1.27
SMC1A-202ENST00000375340 SH2D3CQ8N5H7 860 aa7.12□□□□□ -1.27
SMC1A-202ENST00000375340 GLT8D2Q9H1C3 349 aa7.12□□□□□ -1.27
SMC1A-202ENST00000375340 DCP1AQ9NPI6 582 aaPredicted RBP7.12□□□□□ -1.27
SMC1A-202ENST00000375340 NWD1Q149M9 1564 aa7.12□□□□□ -1.27
SMC1A-202ENST00000375340 EIF4E1BA6NMX2 242 aaKnown RBP7.12□□□□□ -1.27
SMC1A-202ENST00000375340 PRKG1Q13976 671 aa7.12□□□□□ -1.27
SMC1A-202ENST00000375340 TCP11Q8WWU5 503 aa7.12□□□□□ -1.27
SMC1A-202ENST00000375340 TMEM47Q9BQJ4 181 aa7.12□□□□□ -1.27
SMC1A-202ENST00000375340 FAM114A2Q9NRY5 505 aa7.12□□□□□ -1.27
SMC1A-202ENST00000375340 RAB20Q9NX57 234 aa7.12□□□□□ -1.27
SMC1A-202ENST00000375340 CEP72Q9P209 647 aa7.12□□□□□ -1.27
SMC1A-202ENST00000375340 PASKQ96RG2 1323 aa7.12□□□□□ -1.27
SMC1A-202ENST00000375340 A0A087WUV0 522 aaPredicted RBP7.12□□□□□ -1.27
SMC1A-202ENST00000375340 A0A1B0GUA9 196 aa7.12□□□□□ -1.27
SMC1A-202ENST00000375340 POTEB3A0JP26 581 aa7.12□□□□□ -1.27
SMC1A-202ENST00000375340 GOLGA8IPA6NC78 632 aa7.12□□□□□ -1.27
SMC1A-202ENST00000375340 GOLGA8JA6NMD2 632 aa7.12□□□□□ -1.27
SMC1A-202ENST00000375340 POTECB2RU33 542 aa7.12□□□□□ -1.27
SMC1A-202ENST00000375340 UBAP1LF5GYI3 381 aa7.12□□□□□ -1.27
SMC1A-202ENST00000375340 POC1B-GALNT4F8VUJ3 575 aa7.12□□□□□ -1.27
SMC1A-202ENST00000375340 ARHGEF16Q5VV41 709 aa7.12□□□□□ -1.27
SMC1A-202ENST00000375340 POTEBQ6S5H4 581 aa7.12□□□□□ -1.27
SMC1A-202ENST00000375340 RASGRP2Q7LDG7 609 aa7.12□□□□□ -1.27
SMC1A-202ENST00000375340 FAM186BQ8IYM0 893 aa7.12□□□□□ -1.27
SMC1A-202ENST00000375340 NOA1Q8NC60 698 aaKnown RBP7.12□□□□□ -1.27
SMC1A-202ENST00000375340 KANSL2Q9H9L4 492 aa7.12□□□□□ -1.27
SMC1A-202ENST00000375340 ZNF211Q13398 564 aaPredicted RBP7.12□□□□□ -1.27
SMC1A-202ENST00000375340 RASA3Q14644 834 aa7.12□□□□□ -1.27
SMC1A-202ENST00000375340 CCDC62Q6P9F0 684 aa7.12□□□□□ -1.27
SMC1A-202ENST00000375340 RNF207Q6ZRF8 634 aa7.12□□□□□ -1.27
SMC1A-202ENST00000375340 TADA2BQ86TJ2 420 aa7.12□□□□□ -1.27
SMC1A-202ENST00000375340 RAB3IPQ96QF0 476 aaPredicted RBP7.12□□□□□ -1.27
SMC1A-202ENST00000375340 A0A0U1RQJ8 604 aa7.12□□□□□ -1.27
SMC1A-202ENST00000375340 H3BQF6 201 aa7.12□□□□□ -1.27
SMC1A-202ENST00000375340 STAM2O75886 525 aa7.12□□□□□ -1.27
SMC1A-202ENST00000375340 ACSL3O95573 720 aa7.12□□□□□ -1.27
SMC1A-202ENST00000375340 PSMC2P35998 433 aaKnown RBP7.12□□□□□ -1.27
SMC1A-202ENST00000375340 CACNB3P54284 484 aa7.12□□□□□ -1.27
SMC1A-202ENST00000375340 SPATS2Q86XZ4 545 aaKnown RBP7.12□□□□□ -1.27
SMC1A-202ENST00000375340 BANK1Q8NDB2 785 aa7.12□□□□□ -1.27
SMC1A-202ENST00000375340 MLXIPLQ9NP71 852 aa7.12□□□□□ -1.27
SMC1A-202ENST00000375340 STK17AQ9UEE5 414 aa7.12□□□□□ -1.27
SMC1A-202ENST00000375340 ADAMTS1Q9UHI8 967 aa7.12□□□□□ -1.27
SMC1A-202ENST00000375340 TUBE1Q9UJT0 475 aa7.12□□□□□ -1.27
SMC1A-202ENST00000375340 PLEKP08567 350 aaPredicted RBP7.12□□□□□ -1.27
SMC1A-202ENST00000375340 MUM1Q2TAK8 710 aa7.12□□□□□ -1.27
SMC1A-202ENST00000375340 XKR9Q5GH70 373 aa7.12□□□□□ -1.27
SMC1A-202ENST00000375340 ZNF653Q96CK0 615 aa7.12□□□□□ -1.27
SMC1A-202ENST00000375340 INTS9Q9NV88 658 aaKnown RBP7.12□□□□□ -1.27
SMC1A-202ENST00000375340 MINPP1Q9UNW1 487 aa7.12□□□□□ -1.27
SMC1A-202ENST00000375340 POTEFA5A3E0 1075 aa7.12□□□□□ -1.27
SMC1A-202ENST00000375340 CTNND1O60716 968 aaKnown RBP7.12□□□□□ -1.27
SMC1A-202ENST00000375340 TDP2O95551 362 aa7.12□□□□□ -1.27
SMC1A-202ENST00000375340 POTEIP0CG38 1075 aa7.12□□□□□ -1.27
SMC1A-202ENST00000375340 ERVK-24P63145 666 aa7.12□□□□□ -1.27
SMC1A-202ENST00000375340 CLUL1Q15846 466 aa7.12□□□□□ -1.27
SMC1A-202ENST00000375340 POTEGQ6S5H5 508 aa7.12□□□□□ -1.27
SMC1A-202ENST00000375340 POTEEQ6S8J3 1075 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 105.7 ms