RNA–Protein interactions for RNA: ENST00000375001.7

COL15A1-201, Transcript of collagen type XV alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL15A1, Length 5,496 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1-201ENST00000375001 KIAA2013Q8IYS2 634 aa21.37■■□□□ 1.01
COL15A1-201ENST00000375001 MMS19Q96T76 1030 aa21.37■■□□□ 1.01
COL15A1-201ENST00000375001 NVLO15381 856 aaKnown RBP21.37■■□□□ 1.01
COL15A1-201ENST00000375001 ATP1A3P13637 1013 aa21.37■■□□□ 1.01
COL15A1-201ENST00000375001 PTK2Q05397 1052 aa21.37■■□□□ 1.01
COL15A1-201ENST00000375001 C1orf146Q5VVC0 180 aa21.37■■□□□ 1.01
COL15A1-201ENST00000375001 PGBD1Q96JS3 809 aa21.37■■□□□ 1.01
COL15A1-201ENST00000375001 ZNF277Q9NRM2 450 aaPredicted RBP21.37■■□□□ 1.01
COL15A1-201ENST00000375001 TMOD4Q9NZQ9 345 aa21.37■■□□□ 1.01
COL15A1-201ENST00000375001 MAN1B1Q9UKM7 699 aa21.37■■□□□ 1.01
COL15A1-201ENST00000375001 MAGED2Q9UNF1 606 aaPredicted RBP21.37■■□□□ 1.01
COL15A1-201ENST00000375001 PCDHA13Q9Y5I0 950 aa21.37■■□□□ 1.01
COL15A1-201ENST00000375001 KIF11P52732 1056 aa21.37■■□□□ 1.01
COL15A1-201ENST00000375001 MYL7Q01449 175 aa21.37■■□□□ 1.01
COL15A1-201ENST00000375001 NEK8Q86SG6 692 aa21.37■■□□□ 1.01
COL15A1-201ENST00000375001 ATP8A2Q9NTI2 1148 aa21.37■■□□□ 1.01
COL15A1-201ENST00000375001 RAD23BP54727 409 aa21.37■■□□□ 1.01
COL15A1-201ENST00000375001 RWDD2BP57060 319 aa21.37■■□□□ 1.01
COL15A1-201ENST00000375001 CUL1Q13616 776 aa21.37■■□□□ 1.01
COL15A1-201ENST00000375001 RGS9BPQ6ZS82 235 aa21.37■■□□□ 1.01
COL15A1-201ENST00000375001 FAM186BQ8IYM0 893 aa21.37■■□□□ 1.01
COL15A1-201ENST00000375001 KLC4Q9NSK0 619 aa21.37■■□□□ 1.01
COL15A1-201ENST00000375001 TLK1Q9UKI8 766 aa21.37■■□□□ 1.01
COL15A1-201ENST00000375001 ANGPTL3Q9Y5C1 460 aa21.37■■□□□ 1.01
COL15A1-201ENST00000375001 COL4A3BPQ9Y5P4 624 aa21.37■■□□□ 1.01
COL15A1-201ENST00000375001 PFDN6O15212 129 aa21.36■■□□□ 1.01
COL15A1-201ENST00000375001 DYNLT1P63172 113 aa21.36■■□□□ 1.01
COL15A1-201ENST00000375001 TSTA3Q13630 321 aaPredicted RBP21.36■■□□□ 1.01
COL15A1-201ENST00000375001 SPOPLQ6IQ16 392 aa21.36■■□□□ 1.01
COL15A1-201ENST00000375001 TMEM60Q9H2L4 133 aa21.36■■□□□ 1.01
COL15A1-201ENST00000375001 SATB2Q9UPW6 733 aa21.36■■□□□ 1.01
COL15A1-201ENST00000375001 ENO4A6NNW6 628 aa21.36■■□□□ 1.01
COL15A1-201ENST00000375001 GOLGA8HP0CJ92 632 aa21.36■■□□□ 1.01
COL15A1-201ENST00000375001 RAP1GDS1P52306 607 aa21.36■■□□□ 1.01
COL15A1-201ENST00000375001 FOXD4Q12950 439 aaPredicted RBP21.36■■□□□ 1.01
COL15A1-201ENST00000375001 NECTIN1Q15223 517 aa21.36■■□□□ 1.01
COL15A1-201ENST00000375001 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.36■■□□□ 1.01
COL15A1-201ENST00000375001 GYG1P46976 350 aa21.36■■□□□ 1.01
COL15A1-201ENST00000375001 CNBD1Q8NA66 436 aa21.36■■□□□ 1.01
COL15A1-201ENST00000375001 PI4K2BQ8TCG2 481 aa21.36■■□□□ 1.01
COL15A1-201ENST00000375001 P2RX5Q93086 422 aa21.36■■□□□ 1.01
COL15A1-201ENST00000375001 ANO3Q9BYT9 981 aa21.36■■□□□ 1.01
COL15A1-201ENST00000375001 TRIM55Q9BYV6 548 aa21.36■■□□□ 1.01
COL15A1-201ENST00000375001 GMNCA6NCL1 334 aa21.36■■□□□ 1.01
COL15A1-201ENST00000375001 A6NJR5 290 aa21.36■■□□□ 1.01
COL15A1-201ENST00000375001 SESTD1Q86VW0 696 aa21.36■■□□□ 1.01
COL15A1-201ENST00000375001 GSPT2Q8IYD1 628 aaKnown RBP21.36■■□□□ 1.01
COL15A1-201ENST00000375001 PNMA1Q8ND90 353 aa21.36■■□□□ 1.01
COL15A1-201ENST00000375001 DDX28Q9NUL7 540 aaKnown RBP21.36■■□□□ 1.01
COL15A1-201ENST00000375001 ARPP21Q9UBL0 812 aaPredicted RBP21.36■■□□□ 1.01
COL15A1-201ENST00000375001 BBS9Q3SYG4 887 aa21.35■■□□□ 1.01
COL15A1-201ENST00000375001 FBXL13Q8NEE6 735 aa21.35■■□□□ 1.01
COL15A1-201ENST00000375001 MED10Q9BTT4 135 aa21.35■■□□□ 1.01
COL15A1-201ENST00000375001 ATP10AO60312 1499 aa21.35■■□□□ 1.01
COL15A1-201ENST00000375001 ATP5HO75947 161 aa21.35■■□□□ 1.01
COL15A1-201ENST00000375001 PSMC1P62191 440 aaKnown RBP21.35■■□□□ 1.01
COL15A1-201ENST00000375001 MDM2Q00987 491 aaPredicted RBP21.35■■□□□ 1.01
COL15A1-201ENST00000375001 ARHGAP18Q8N392 663 aa21.35■■□□□ 1.01
COL15A1-201ENST00000375001 SMCR8Q8TEV9 937 aaPredicted RBP21.35■■□□□ 1.01
COL15A1-201ENST00000375001 CSRNP1Q96S65 589 aa21.35■■□□□ 1.01
COL15A1-201ENST00000375001 ZFP69BQ9UJL9 534 aa21.35■■□□□ 1.01
COL15A1-201ENST00000375001 KDM1AO60341 852 aa21.35■■□□□ 1.01
COL15A1-201ENST00000375001 S100BP04271 92 aaPredicted RBP21.35■■□□□ 1.01
COL15A1-201ENST00000375001 PHKG2P15735 406 aa21.35■■□□□ 1.01
COL15A1-201ENST00000375001 HSPA6P17066 643 aa21.35■■□□□ 1.01
COL15A1-201ENST00000375001 NR2F2P24468 414 aa21.35■■□□□ 1.01
COL15A1-201ENST00000375001 IPO11Q9UI26 975 aaKnown RBP21.35■■□□□ 1.01
COL15A1-201ENST00000375001 ARHGAP10A1A4S6 786 aa21.35■■□□□ 1.01
COL15A1-201ENST00000375001 PHKA1P46020 1223 aa21.35■■□□□ 1.01
COL15A1-201ENST00000375001 IQCB1Q15051 598 aa21.35■■□□□ 1.01
COL15A1-201ENST00000375001 PANX2Q96RD6 677 aa21.35■■□□□ 1.01
COL15A1-201ENST00000375001 TTC1Q99614 292 aa21.35■■□□□ 1.01
COL15A1-201ENST00000375001 ING2Q9H160 280 aa21.35■■□□□ 1.01
COL15A1-201ENST00000375001 CXorf56Q9H5V9 222 aa21.35■■□□□ 1.01
COL15A1-201ENST00000375001 HESX1Q9UBX0 185 aa21.35■■□□□ 1.01
COL15A1-201ENST00000375001 PRAMEF22A3QJZ6 481 aa21.35■■□□□ 1.01
COL15A1-201ENST00000375001 LRRN2O75325 713 aa21.35■■□□□ 1.01
COL15A1-201ENST00000375001 SPARCL1Q14515 664 aa21.35■■□□□ 1.01
COL15A1-201ENST00000375001 SLFNL1Q499Z3 407 aa21.35■■□□□ 1.01
COL15A1-201ENST00000375001 TTC17Q96AE7 1141 aa21.35■■□□□ 1.01
COL15A1-201ENST00000375001 DHTKD1Q96HY7 919 aaPredicted RBP21.35■■□□□ 1.01
COL15A1-201ENST00000375001 EYA3Q99504 573 aa21.35■■□□□ 1.01
COL15A1-201ENST00000375001 MFAP3P55082 362 aa21.34■■□□□ 1.01
COL15A1-201ENST00000375001 ZBED6P86452 979 aa21.34■■□□□ 1.01
COL15A1-201ENST00000375001 MAN2A1Q16706 1144 aa21.34■■□□□ 1.01
COL15A1-201ENST00000375001 OLFM3Q96PB7 478 aa21.34■■□□□ 1.01
COL15A1-201ENST00000375001 SYCE1LA8MT33 242 aa21.34■■□□□ 1.01
COL15A1-201ENST00000375001 KIFC3Q9BVG8 833 aa21.34■■□□□ 1.01
COL15A1-201ENST00000375001 CCDC87Q9NVE4 849 aa21.34■■□□□ 1.01
COL15A1-201ENST00000375001 TTI1O43156 1089 aa21.34■■□□□ 1.01
COL15A1-201ENST00000375001 SRGAP2O75044 1071 aa21.34■■□□□ 1.01
COL15A1-201ENST00000375001 CCDC159P0C7I6 412 aa21.34■■□□□ 1.01
COL15A1-201ENST00000375001 OCRLQ01968 901 aa21.34■■□□□ 1.01
COL15A1-201ENST00000375001 LRRC41Q15345 812 aa21.34■■□□□ 1.01
COL15A1-201ENST00000375001 NLRP14Q86W24 1093 aa21.34■■□□□ 1.01
COL15A1-201ENST00000375001 CRLF3Q8IUI8 442 aa21.34■■□□□ 1.01
COL15A1-201ENST00000375001 FOXP1Q9H334 677 aaPredicted RBP21.34■■□□□ 1.01
COL15A1-201ENST00000375001 CFAP36Q96G28 342 aa21.34■■□□□ 1.01
COL15A1-201ENST00000375001 TRPV6Q9H1D0 765 aa21.34■■□□□ 1.01
COL15A1-201ENST00000375001 GGA1Q9UJY5 639 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms