RNA–Protein interactions for RNA: ENST00000374813.1

HLA-DOA-202, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 303 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-202ENST00000374813 SUSD6Q92537 303 aa11.04□□□□□ -0.64
HLA-DOA-202ENST00000374813 ATP6V0A1Q93050 837 aa11.04□□□□□ -0.64
HLA-DOA-202ENST00000374813 CNTNAP3BQ96NU0 1288 aa11.04□□□□□ -0.64
HLA-DOA-202ENST00000374813 IWS1Q96ST2 819 aa11.04□□□□□ -0.64
HLA-DOA-202ENST00000374813 CNTNAP3Q9BZ76 1288 aa11.04□□□□□ -0.64
HLA-DOA-202ENST00000374813 NACAP1Q9BZK3 213 aa11.04□□□□□ -0.64
HLA-DOA-202ENST00000374813 DDX41Q9UJV9 622 aaKnown RBP11.04□□□□□ -0.64
HLA-DOA-202ENST00000374813 TNNQ9UQP3 1299 aa11.04□□□□□ -0.64
HLA-DOA-202ENST00000374813 NR2E1Q9Y466 385 aa11.04□□□□□ -0.64
HLA-DOA-202ENST00000374813 C17orf102A2RUQ5 167 aa11.03□□□□□ -0.64
HLA-DOA-202ENST00000374813 PATL2C9JE40 543 aaKnown RBP11.03□□□□□ -0.64
HLA-DOA-202ENST00000374813 CHGBP05060 677 aa11.03□□□□□ -0.64
HLA-DOA-202ENST00000374813 SRGAP2BP0DMP2 458 aa11.03□□□□□ -0.64
HLA-DOA-202ENST00000374813 CCDC96Q2M329 555 aa11.03□□□□□ -0.64
HLA-DOA-202ENST00000374813 SYDE2Q5VT97 1194 aa11.03□□□□□ -0.64
HLA-DOA-202ENST00000374813 CEP85Q6P2H3 762 aa11.03□□□□□ -0.64
HLA-DOA-202ENST00000374813 RBM23Q86U06 439 aaKnown RBP11.03□□□□□ -0.64
HLA-DOA-202ENST00000374813 KREMEN2Q8NCW0 462 aa11.03□□□□□ -0.64
HLA-DOA-202ENST00000374813 SPPL3Q8TCT6 385 aa11.03□□□□□ -0.64
HLA-DOA-202ENST00000374813 NSUN6Q8TEA1 469 aaKnown RBP11.03□□□□□ -0.64
HLA-DOA-202ENST00000374813 MFSD1Q9H3U5 465 aa11.03□□□□□ -0.64
HLA-DOA-202ENST00000374813 TLE6Q9H808 572 aa11.03□□□□□ -0.64
HLA-DOA-202ENST00000374813 BARX2Q9UMQ3 279 aaPredicted RBP11.03□□□□□ -0.64
HLA-DOA-202ENST00000374813 SORCS3Q9UPU3 1222 aa11.03□□□□□ -0.64
HLA-DOA-202ENST00000374813 KIAA1217Q5T5P2 1943 aa11.03□□□□□ -0.64
HLA-DOA-202ENST00000374813 SPTBN2O15020 2390 aa11.03□□□□□ -0.64
HLA-DOA-202ENST00000374813 ATRXP46100 2492 aa11.02□□□□□ -0.64
HLA-DOA-202ENST00000374813 TSPY2A6NKD2 308 aa11.02□□□□□ -0.65
HLA-DOA-202ENST00000374813 EIF3JO75822 258 aaKnown RBP11.02□□□□□ -0.65
HLA-DOA-202ENST00000374813 CSPG5O95196 566 aa11.02□□□□□ -0.65
HLA-DOA-202ENST00000374813 LMNAP02545 664 aaKnown RBP11.02□□□□□ -0.65
HLA-DOA-202ENST00000374813 ZNF286BP0CG31 522 aa11.02□□□□□ -0.65
HLA-DOA-202ENST00000374813 GNAT1P11488 350 aa11.02□□□□□ -0.65
HLA-DOA-202ENST00000374813 SLC16A2P36021 539 aa11.02□□□□□ -0.65
HLA-DOA-202ENST00000374813 ITPRIPQ8IWB1 547 aa11.02□□□□□ -0.65
HLA-DOA-202ENST00000374813 FTSJ3Q8IY81 847 aaKnown RBP11.02□□□□□ -0.65
HLA-DOA-202ENST00000374813 KCNG4Q8TDN1 519 aa11.02□□□□□ -0.65
HLA-DOA-202ENST00000374813 ZNF689Q96CS4 500 aaPredicted RBP11.02□□□□□ -0.65
HLA-DOA-202ENST00000374813 NEK1Q96PY6 1258 aa11.02□□□□□ -0.65
HLA-DOA-202ENST00000374813 CDCA3Q99618 268 aaPredicted RBP11.02□□□□□ -0.65
HLA-DOA-202ENST00000374813 PCDHGC5Q9Y5F6 944 aa11.02□□□□□ -0.65
HLA-DOA-202ENST00000374813 TTC3P53804 2025 aa11.02□□□□□ -0.65
HLA-DOA-202ENST00000374813 GLP2RO95838 553 aa11.01□□□□□ -0.65
HLA-DOA-202ENST00000374813 ITGB1P05556 798 aa11.01□□□□□ -0.65
HLA-DOA-202ENST00000374813 HOXD8P13378 290 aaPredicted RBP11.01□□□□□ -0.65
HLA-DOA-202ENST00000374813 KCNV1Q6PIU1 500 aa11.01□□□□□ -0.65
HLA-DOA-202ENST00000374813 ADGRD2Q7Z7M1 963 aa11.01□□□□□ -0.65
HLA-DOA-202ENST00000374813 IFNL3Q8IZI9 196 aa11.01□□□□□ -0.65
HLA-DOA-202ENST00000374813 MICAL1Q8TDZ2 1067 aa11.01□□□□□ -0.65
HLA-DOA-202ENST00000374813 POF1BQ8WVV4 589 aa11.01□□□□□ -0.65
HLA-DOA-202ENST00000374813 BCL11AQ9H165 835 aa11.01□□□□□ -0.65
HLA-DOA-202ENST00000374813 RC3H2Q9HBD1 1191 aaKnown RBP11.01□□□□□ -0.65
HLA-DOA-202ENST00000374813 MTMR7Q9Y216 660 aa11.01□□□□□ -0.65
HLA-DOA-202ENST00000374813 MRVI1Q9Y6F6 885 aa11.01□□□□□ -0.65
HLA-DOA-202ENST00000374813 WDR19Q8NEZ3 1342 aa11.01□□□□□ -0.65
HLA-DOA-202ENST00000374813 H3BRB1 525 aa11□□□□□ -0.65
HLA-DOA-202ENST00000374813 ENPP3O14638 875 aa11□□□□□ -0.65
HLA-DOA-202ENST00000374813 RAB11FIP3O75154 756 aa11□□□□□ -0.65
HLA-DOA-202ENST00000374813 DGKIO75912 1065 aa11□□□□□ -0.65
HLA-DOA-202ENST00000374813 ZFYP08048 801 aaPredicted RBP11□□□□□ -0.65
HLA-DOA-202ENST00000374813 CTSHP09668 335 aa11□□□□□ -0.65
HLA-DOA-202ENST00000374813 DNAJB1P25685 340 aa11□□□□□ -0.65
HLA-DOA-202ENST00000374813 HIC1Q14526 733 aa11□□□□□ -0.65
HLA-DOA-202ENST00000374813 TTBK2Q6IQ55 1244 aa11□□□□□ -0.65
HLA-DOA-202ENST00000374813 KIAA2013Q8IYS2 634 aa11□□□□□ -0.65
HLA-DOA-202ENST00000374813 KLHL23Q8NBE8 558 aa11□□□□□ -0.65
HLA-DOA-202ENST00000374813 ATP8B4Q8TF62 1192 aa11□□□□□ -0.65
HLA-DOA-202ENST00000374813 APPBP2Q92624 585 aa11□□□□□ -0.65
HLA-DOA-202ENST00000374813 OSBP2Q969R2 916 aa11□□□□□ -0.65
HLA-DOA-202ENST00000374813 RMDN3Q96TC7 470 aa11□□□□□ -0.65
HLA-DOA-202ENST00000374813 TUT1Q9H6E5 874 aaKnown RBP11□□□□□ -0.65
HLA-DOA-202ENST00000374813 IL17RBQ9NRM6 502 aa11□□□□□ -0.65
HLA-DOA-202ENST00000374813 KAT6AQ92794 2004 aa11□□□□□ -0.65
HLA-DOA-202ENST00000374813 TREHO43280 583 aa10.99□□□□□ -0.65
HLA-DOA-202ENST00000374813 GPAA1O43292 621 aa10.99□□□□□ -0.65
HLA-DOA-202ENST00000374813 BRD1O95696 1058 aa10.99□□□□□ -0.65
HLA-DOA-202ENST00000374813 TGFB3P10600 412 aa10.99□□□□□ -0.65
HLA-DOA-202ENST00000374813 HOXB8P17481 243 aaPredicted RBP10.99□□□□□ -0.65
HLA-DOA-202ENST00000374813 HOXC8P31273 242 aa10.99□□□□□ -0.65
HLA-DOA-202ENST00000374813 UBE3AQ05086 875 aa10.99□□□□□ -0.65
HLA-DOA-202ENST00000374813 FAM26DQ5JW98 314 aa10.99□□□□□ -0.65
HLA-DOA-202ENST00000374813 MYSM1Q5VVJ2 828 aa10.99□□□□□ -0.65
HLA-DOA-202ENST00000374813 PDE12Q6L8Q7 609 aaKnown RBP10.99□□□□□ -0.65
HLA-DOA-202ENST00000374813 TMEM184AQ6ZMB5 413 aa10.99□□□□□ -0.65
HLA-DOA-202ENST00000374813 MCF2L2Q86YR7 1114 aa10.99□□□□□ -0.65
HLA-DOA-202ENST00000374813 CMTR2Q8IYT2 770 aaKnown RBP10.99□□□□□ -0.65
HLA-DOA-202ENST00000374813 SPATA33Q96N06 139 aa10.99□□□□□ -0.65
HLA-DOA-202ENST00000374813 RNPEPQ9H4A4 650 aa10.99□□□□□ -0.65
HLA-DOA-202ENST00000374813 EPB41L4AQ9HCS5 686 aaPredicted RBP10.99□□□□□ -0.65
HLA-DOA-202ENST00000374813 DLL3Q9NYJ7 618 aa10.99□□□□□ -0.65
HLA-DOA-202ENST00000374813 MAP1BP46821 2468 aaKnown RBP10.99□□□□□ -0.65
HLA-DOA-202ENST00000374813 RNF113AO15541 343 aaKnown RBP10.98□□□□□ -0.65
HLA-DOA-202ENST00000374813 HMMRO75330 724 aa10.98□□□□□ -0.65
HLA-DOA-202ENST00000374813 SMIM10L2AP0DMW4 78 aa10.98□□□□□ -0.65
HLA-DOA-202ENST00000374813 SMIM10L2BP0DMW5 78 aa10.98□□□□□ -0.65
HLA-DOA-202ENST00000374813 SDHBP21912 280 aa10.98□□□□□ -0.65
HLA-DOA-202ENST00000374813 NOVP48745 357 aa10.98□□□□□ -0.65
HLA-DOA-202ENST00000374813 PPARAQ07869 468 aa10.98□□□□□ -0.65
HLA-DOA-202ENST00000374813 ANGPT1Q15389 498 aa10.98□□□□□ -0.65
HLA-DOA-202ENST00000374813 HSDL1Q3SXM5 330 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms