RNA–Protein interactions for RNA: ENST00000374732.7

USP48-203, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 3,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-203ENST00000374732 MCF2L2Q86YR7 1114 aa8.71□□□□□ -1.01
USP48-203ENST00000374732 CEP70Q8NHQ1 597 aa8.71□□□□□ -1.01
USP48-203ENST00000374732 RELTQ969Z4 430 aa8.71□□□□□ -1.01
USP48-203ENST00000374732 UBN1Q9NPG3 1134 aa8.71□□□□□ -1.01
USP48-203ENST00000374732 ZNF624Q9P2J8 865 aaPredicted RBP8.71□□□□□ -1.01
USP48-203ENST00000374732 FARP1Q9Y4F1 1045 aaPredicted RBP8.71□□□□□ -1.01
USP48-203ENST00000374732 AFG3L2Q9Y4W6 797 aa8.71□□□□□ -1.01
USP48-203ENST00000374732 TACC3Q9Y6A5 838 aa8.71□□□□□ -1.01
USP48-203ENST00000374732 RNF8O76064 485 aa8.71□□□□□ -1.02
USP48-203ENST00000374732 SERPINC1P01008 464 aa8.71□□□□□ -1.02
USP48-203ENST00000374732 HNRNPH1P31943 449 aaKnown RBP8.71□□□□□ -1.02
USP48-203ENST00000374732 GBP2P32456 591 aaPredicted RBP8.71□□□□□ -1.02
USP48-203ENST00000374732 ST13P50502 369 aaKnown RBP8.71□□□□□ -1.02
USP48-203ENST00000374732 OXCT1P55809 520 aa8.71□□□□□ -1.02
USP48-203ENST00000374732 GJA9P57773 515 aa8.71□□□□□ -1.02
USP48-203ENST00000374732 CLDN10P78369 228 aa8.71□□□□□ -1.02
USP48-203ENST00000374732 FANCCQ00597 558 aa8.71□□□□□ -1.02
USP48-203ENST00000374732 AP1B1Q10567 949 aa8.71□□□□□ -1.02
USP48-203ENST00000374732 CBX3Q13185 183 aa8.71□□□□□ -1.02
USP48-203ENST00000374732 ITGA7Q13683 1181 aa8.71□□□□□ -1.02
USP48-203ENST00000374732 DPYSQ14117 519 aa8.71□□□□□ -1.02
USP48-203ENST00000374732 GNA13Q14344 377 aa8.71□□□□□ -1.02
USP48-203ENST00000374732 TUBB8Q3ZCM7 444 aa8.71□□□□□ -1.02
USP48-203ENST00000374732 NBPF14Q5TI25 921 aa8.71□□□□□ -1.02
USP48-203ENST00000374732 ZNF540Q8NDQ6 660 aa8.71□□□□□ -1.02
USP48-203ENST00000374732 NRKQ7Z2Y5 1582 aa8.7□□□□□ -1.02
USP48-203ENST00000374732 TGDSO95455 350 aa8.7□□□□□ -1.02
USP48-203ENST00000374732 ADCY5O95622 1261 aa8.7□□□□□ -1.02
USP48-203ENST00000374732 NPPAP01160 153 aa8.7□□□□□ -1.02
USP48-203ENST00000374732 KRT14P02533 472 aa8.7□□□□□ -1.02
USP48-203ENST00000374732 SLC5A1P13866 664 aa8.7□□□□□ -1.02
USP48-203ENST00000374732 NFKBIAP25963 317 aa8.7□□□□□ -1.02
USP48-203ENST00000374732 CETN2P41208 172 aa8.7□□□□□ -1.02
USP48-203ENST00000374732 PLIN5Q00G26 463 aa8.7□□□□□ -1.02
USP48-203ENST00000374732 STK11Q15831 433 aa8.7□□□□□ -1.02
USP48-203ENST00000374732 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.7□□□□□ -1.02
USP48-203ENST00000374732 ZNF354CQ86Y25 554 aa8.7□□□□□ -1.02
USP48-203ENST00000374732 PALB2Q86YC2 1186 aa8.7□□□□□ -1.02
USP48-203ENST00000374732 FAM20CQ8IXL6 584 aa8.7□□□□□ -1.02
USP48-203ENST00000374732 KIF1BPQ96EK5 621 aa8.7□□□□□ -1.02
USP48-203ENST00000374732 B3GNT4Q9C0J1 378 aa8.7□□□□□ -1.02
USP48-203ENST00000374732 TBC1D22BQ9NU19 505 aa8.7□□□□□ -1.02
USP48-203ENST00000374732 BLOC1S4Q9NUP1 217 aa8.7□□□□□ -1.02
USP48-203ENST00000374732 BCL9O00512 1426 aa8.7□□□□□ -1.02
USP48-203ENST00000374732 CYP2D7A0A087X1C5 515 aa8.7□□□□□ -1.02
USP48-203ENST00000374732 B4GALT4O60513 344 aa8.7□□□□□ -1.02
USP48-203ENST00000374732 SNX4O95219 450 aa8.7□□□□□ -1.02
USP48-203ENST00000374732 IFIT1P09914 478 aaKnown RBP8.7□□□□□ -1.02
USP48-203ENST00000374732 MCM3P25205 808 aa8.7□□□□□ -1.02
USP48-203ENST00000374732 CAP2P40123 477 aa8.7□□□□□ -1.02
USP48-203ENST00000374732 ADCY8P40145 1251 aa8.7□□□□□ -1.02
USP48-203ENST00000374732 CORO7P57737 925 aa8.7□□□□□ -1.02
USP48-203ENST00000374732 DSTNP60981 165 aa8.7□□□□□ -1.02
USP48-203ENST00000374732 DR1Q01658 176 aa8.7□□□□□ -1.02
USP48-203ENST00000374732 MAP2K5Q13163 448 aa8.7□□□□□ -1.02
USP48-203ENST00000374732 PDE1CQ14123 709 aaPredicted RBP8.7□□□□□ -1.02
USP48-203ENST00000374732 MAP7Q14244 749 aa8.7□□□□□ -1.02
USP48-203ENST00000374732 NAA25Q14CX7 972 aa8.7□□□□□ -1.02
USP48-203ENST00000374732 C21orf62-AS1Q17RA5 79 aa8.7□□□□□ -1.02
USP48-203ENST00000374732 HSP90AA4PQ58FG1 418 aa8.7□□□□□ -1.02
USP48-203ENST00000374732 TMTC4Q5T4D3 741 aa8.7□□□□□ -1.02
USP48-203ENST00000374732 SPATA1Q5VX52 437 aa8.7□□□□□ -1.02
USP48-203ENST00000374732 BRINP3Q76B58 766 aa8.7□□□□□ -1.02
USP48-203ENST00000374732 AFAP1L1Q8TED9 768 aa8.7□□□□□ -1.02
USP48-203ENST00000374732 MAML3Q96JK9 1138 aa8.7□□□□□ -1.02
USP48-203ENST00000374732 SRPK1Q96SB4 655 aaKnown RBP8.7□□□□□ -1.02
USP48-203ENST00000374732 BARD1Q99728 777 aaKnown RBP8.7□□□□□ -1.02
USP48-203ENST00000374732 ALG13Q9NP73 1137 aaKnown RBP8.7□□□□□ -1.02
USP48-203ENST00000374732 PHF24Q9UPV7 400 aa8.7□□□□□ -1.02
USP48-203ENST00000374732 VIRMAQ69YN4 1812 aaKnown RBP8.7□□□□□ -1.02
USP48-203ENST00000374732 COL24A1Q17RW2 1714 aa8.7□□□□□ -1.02
USP48-203ENST00000374732 GOLGA6L7A0A1B0GV03 622 aa8.7□□□□□ -1.02
USP48-203ENST00000374732 TTLL13PA6NNM8 815 aa8.7□□□□□ -1.02
USP48-203ENST00000374732 FBXO21O94952 628 aa8.7□□□□□ -1.02
USP48-203ENST00000374732 POTEJP0CG39 1038 aa8.7□□□□□ -1.02
USP48-203ENST00000374732 TMEM11P17152 192 aa8.7□□□□□ -1.02
USP48-203ENST00000374732 MCL1Q07820 350 aa8.7□□□□□ -1.02
USP48-203ENST00000374732 PPA1Q15181 289 aa8.7□□□□□ -1.02
USP48-203ENST00000374732 OASLQ15646 514 aaKnown RBP8.7□□□□□ -1.02
USP48-203ENST00000374732 GATAD2AQ86YP4 633 aa8.7□□□□□ -1.02
USP48-203ENST00000374732 C2orf69Q8N8R5 385 aa8.7□□□□□ -1.02
USP48-203ENST00000374732 ZNF606Q8WXB4 792 aa8.7□□□□□ -1.02
USP48-203ENST00000374732 CNKSR1Q969H4 720 aa8.7□□□□□ -1.02
USP48-203ENST00000374732 C7orf25Q9BPX7 421 aa8.7□□□□□ -1.02
USP48-203ENST00000374732 CYP4F11Q9HBI6 524 aa8.7□□□□□ -1.02
USP48-203ENST00000374732 PCDH18Q9HCL0 1135 aa8.7□□□□□ -1.02
USP48-203ENST00000374732 SEPT11Q9NVA2 429 aaKnown RBP8.7□□□□□ -1.02
USP48-203ENST00000374732 HDAC3O15379 428 aa8.69□□□□□ -1.02
USP48-203ENST00000374732 MTSS1O43312 755 aa8.69□□□□□ -1.02
USP48-203ENST00000374732 PRKAR2AP13861 404 aaKnown RBP8.69□□□□□ -1.02
USP48-203ENST00000374732 GPTP24298 496 aa8.69□□□□□ -1.02
USP48-203ENST00000374732 MCM4P33991 863 aa8.69□□□□□ -1.02
USP48-203ENST00000374732 IDUAP35475 653 aa8.69□□□□□ -1.02
USP48-203ENST00000374732 EPS15P42566 896 aa8.69□□□□□ -1.02
USP48-203ENST00000374732 B2MP61769 119 aa8.69□□□□□ -1.02
USP48-203ENST00000374732 KRT83P78385 493 aa8.69□□□□□ -1.02
USP48-203ENST00000374732 NCBP1Q09161 790 aaKnown RBP8.69□□□□□ -1.02
USP48-203ENST00000374732 TUBA3CQ13748 450 aa8.69□□□□□ -1.02
USP48-203ENST00000374732 BYSLQ13895 437 aaKnown RBP8.69□□□□□ -1.02
USP48-203ENST00000374732 TKFCQ3LXA3 575 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms