RNA–Protein interactions for RNA: ENST00000374399.8

NIPAL3-204, Transcript of NIPA like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPAL3, Length 1,711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-204ENST00000374399 NCAPG2Q86XI2 1143 aa17.6■□□□□ 0.41
NIPAL3-204ENST00000374399 FAM43AQ8N2R8 423 aa17.6■□□□□ 0.41
NIPAL3-204ENST00000374399 MLKLQ8NB16 471 aa17.6■□□□□ 0.41
NIPAL3-204ENST00000374399 EIF2AK1Q9BQI3 630 aaKnown RBP17.6■□□□□ 0.41
NIPAL3-204ENST00000374399 NAT10Q9H0A0 1025 aaKnown RBP17.6■□□□□ 0.41
NIPAL3-204ENST00000374399 FBXO40Q9UH90 709 aa17.6■□□□□ 0.41
NIPAL3-204ENST00000374399 PPP1R3GB7ZBB8 358 aa17.59■□□□□ 0.41
NIPAL3-204ENST00000374399 GAS7O60861 476 aa17.59■□□□□ 0.41
NIPAL3-204ENST00000374399 HUNKP57058 714 aa17.59■□□□□ 0.41
NIPAL3-204ENST00000374399 PSMC6P62333 389 aa17.59■□□□□ 0.41
NIPAL3-204ENST00000374399 MTMR1Q13613 665 aa17.59■□□□□ 0.41
NIPAL3-204ENST00000374399 SMYD4Q8IYR2 804 aaPredicted RBP17.59■□□□□ 0.41
NIPAL3-204ENST00000374399 CDK5RAP3Q96JB5 506 aa17.59■□□□□ 0.41
NIPAL3-204ENST00000374399 INPP4AQ96PE3 977 aaPredicted RBP17.59■□□□□ 0.41
NIPAL3-204ENST00000374399 POLR3CQ9BUI4 534 aaPredicted RBP17.59■□□□□ 0.41
NIPAL3-204ENST00000374399 NT5C3AQ9H0P0 336 aa17.59■□□□□ 0.41
NIPAL3-204ENST00000374399 RGL1Q9NZL6 768 aa17.59■□□□□ 0.41
NIPAL3-204ENST00000374399 DOCK5Q9H7D0 1870 aa17.59■□□□□ 0.41
NIPAL3-204ENST00000374399 SOWAHBA6NEL2 793 aa17.58■□□□□ 0.41
NIPAL3-204ENST00000374399 SLITRK3O94933 977 aa17.58■□□□□ 0.41
NIPAL3-204ENST00000374399 SLC25A27O95847 323 aa17.58■□□□□ 0.41
NIPAL3-204ENST00000374399 CCND2P30279 289 aa17.58■□□□□ 0.41
NIPAL3-204ENST00000374399 ERVK-9P63128 1117 aa17.58■□□□□ 0.41
NIPAL3-204ENST00000374399 ERVK-24P63145 666 aa17.58■□□□□ 0.41
NIPAL3-204ENST00000374399 DHX8Q14562 1220 aaKnown RBP17.58■□□□□ 0.41
NIPAL3-204ENST00000374399 KCNB1Q14721 858 aa17.58■□□□□ 0.41
NIPAL3-204ENST00000374399 KMT5BQ4FZB7 885 aa17.58■□□□□ 0.41
NIPAL3-204ENST00000374399 HAUS3Q68CZ6 603 aa17.58■□□□□ 0.41
NIPAL3-204ENST00000374399 CNNM4Q6P4Q7 775 aa17.58■□□□□ 0.41
NIPAL3-204ENST00000374399 SV2BQ7L1I2 683 aa17.58■□□□□ 0.41
NIPAL3-204ENST00000374399 ANKRD35Q8N283 1001 aa17.58■□□□□ 0.41
NIPAL3-204ENST00000374399 FAM133AQ8N9E0 248 aa17.58■□□□□ 0.41
NIPAL3-204ENST00000374399 FGD4Q96M96 766 aa17.58■□□□□ 0.41
NIPAL3-204ENST00000374399 PKD2L1Q9P0L9 805 aa17.58■□□□□ 0.41
NIPAL3-204ENST00000374399 PFASO15067 1338 aa17.58■□□□□ 0.41
NIPAL3-204ENST00000374399 TESPA1A2RU30 521 aaPredicted RBP17.58■□□□□ 0.4
NIPAL3-204ENST00000374399 IKBKBO14920 756 aa17.58■□□□□ 0.4
NIPAL3-204ENST00000374399 CHMP2AO43633 222 aa17.58■□□□□ 0.4
NIPAL3-204ENST00000374399 RHOBTB3O94955 611 aa17.58■□□□□ 0.4
NIPAL3-204ENST00000374399 RASAL3Q86YV0 1011 aa17.58■□□□□ 0.4
NIPAL3-204ENST00000374399 DNERQ8NFT8 737 aa17.58■□□□□ 0.4
NIPAL3-204ENST00000374399 TEKT3Q9BXF9 490 aa17.58■□□□□ 0.4
NIPAL3-204ENST00000374399 PORCNQ9H237 461 aa17.58■□□□□ 0.4
NIPAL3-204ENST00000374399 WRAP73Q9P2S5 460 aaPredicted RBP17.58■□□□□ 0.4
NIPAL3-204ENST00000374399 WDR81Q562E7 1941 aa17.58■□□□□ 0.4
NIPAL3-204ENST00000374399 ADCY5O95622 1261 aa17.57■□□□□ 0.4
NIPAL3-204ENST00000374399 EDNRBP24530 442 aa17.57■□□□□ 0.4
NIPAL3-204ENST00000374399 SLC12A3P55017 1021 aa17.57■□□□□ 0.4
NIPAL3-204ENST00000374399 CYP4A11Q02928 519 aa17.57■□□□□ 0.4
NIPAL3-204ENST00000374399 CCDC173Q0VFZ6 552 aa17.57■□□□□ 0.4
NIPAL3-204ENST00000374399 ZNF658Q5TYW1 1059 aaPredicted RBP17.57■□□□□ 0.4
NIPAL3-204ENST00000374399 SAPCD2Q86UD0 394 aa17.57■□□□□ 0.4
NIPAL3-204ENST00000374399 ERMNQ8TAM6 284 aa17.57■□□□□ 0.4
NIPAL3-204ENST00000374399 GPRASP2Q96D09 838 aa17.57■□□□□ 0.4
NIPAL3-204ENST00000374399 DNAJC19Q96DA6 116 aa17.57■□□□□ 0.4
NIPAL3-204ENST00000374399 PNMA3Q9UL41 463 aa17.57■□□□□ 0.4
NIPAL3-204ENST00000374399 GDAQ9Y2T3 454 aa17.57■□□□□ 0.4
NIPAL3-204ENST00000374399 DNAJC25-GNG10A0A024R161 153 aa17.56■□□□□ 0.4
NIPAL3-204ENST00000374399 PLA2G4BP0C869 781 aa17.56■□□□□ 0.4
NIPAL3-204ENST00000374399 ALDH5A1P51649 535 aaPredicted RBP17.56■□□□□ 0.4
NIPAL3-204ENST00000374399 DYDC2Q96IM9 177 aa17.56■□□□□ 0.4
NIPAL3-204ENST00000374399 IWS1Q96ST2 819 aa17.56■□□□□ 0.4
NIPAL3-204ENST00000374399 BCAS3Q9H6U6 928 aa17.56■□□□□ 0.4
NIPAL3-204ENST00000374399 TUFT1Q9NNX1 390 aa17.56■□□□□ 0.4
NIPAL3-204ENST00000374399 STK24Q9Y6E0 443 aa17.56■□□□□ 0.4
NIPAL3-204ENST00000374399 BECN2A8MW95 431 aa17.55■□□□□ 0.4
NIPAL3-204ENST00000374399 DDX39AO00148 427 aaKnown RBP17.55■□□□□ 0.4
NIPAL3-204ENST00000374399 KIF3CO14782 793 aa17.55■□□□□ 0.4
NIPAL3-204ENST00000374399 CCNE2O96020 404 aa17.55■□□□□ 0.4
NIPAL3-204ENST00000374399 KCNA2P16389 499 aa17.55■□□□□ 0.4
NIPAL3-204ENST00000374399 AMPD3Q01432 767 aa17.55■□□□□ 0.4
NIPAL3-204ENST00000374399 EHHADHQ08426 723 aa17.55■□□□□ 0.4
NIPAL3-204ENST00000374399 CTTNQ14247 550 aaKnown RBP17.55■□□□□ 0.4
NIPAL3-204ENST00000374399 EPHA7Q15375 998 aa17.55■□□□□ 0.4
NIPAL3-204ENST00000374399 ARSHQ5FYA8 562 aa17.55■□□□□ 0.4
NIPAL3-204ENST00000374399 SHCBP1Q8NEM2 672 aa17.55■□□□□ 0.4
NIPAL3-204ENST00000374399 RMND1Q9NWS8 449 aa17.55■□□□□ 0.4
NIPAL3-204ENST00000374399 CYP11B2P19099 503 aa17.55■□□□□ 0.4
NIPAL3-204ENST00000374399 ERCC5P28715 1186 aaPredicted RBP17.55■□□□□ 0.4
NIPAL3-204ENST00000374399 COPB2P35606 906 aa17.55■□□□□ 0.4
NIPAL3-204ENST00000374399 ASIC1P78348 528 aa17.55■□□□□ 0.4
NIPAL3-204ENST00000374399 MYL5Q02045 173 aa17.55■□□□□ 0.4
NIPAL3-204ENST00000374399 SARM1Q6SZW1 724 aa17.55■□□□□ 0.4
NIPAL3-204ENST00000374399 TRMT44Q8IYL2 757 aaKnown RBP17.55■□□□□ 0.4
NIPAL3-204ENST00000374399 GIMAP8Q8ND71 665 aaPredicted RBP17.55■□□□□ 0.4
NIPAL3-204ENST00000374399 GTF3C2Q8WUA4 911 aaPredicted RBP17.55■□□□□ 0.4
NIPAL3-204ENST00000374399 DDX12PQ92771 950 aa17.55■□□□□ 0.4
NIPAL3-204ENST00000374399 EFCC1Q9HA90 598 aa17.55■□□□□ 0.4
NIPAL3-204ENST00000374399 MORF4L1Q9UBU8 362 aa17.55■□□□□ 0.4
NIPAL3-204ENST00000374399 PLXNB2O15031 1838 aa17.54■□□□□ 0.4
NIPAL3-204ENST00000374399 MCM3APO60318 1980 aa17.54■□□□□ 0.4
NIPAL3-204ENST00000374399 SPATA31C2B4DYI2 1134 aa17.54■□□□□ 0.4
NIPAL3-204ENST00000374399 GOLGA6L19H0YKK7 550 aa17.54■□□□□ 0.4
NIPAL3-204ENST00000374399 POTEB2H3BUK9 544 aa17.54■□□□□ 0.4
NIPAL3-204ENST00000374399 ZBTB39O15060 712 aa17.54■□□□□ 0.4
NIPAL3-204ENST00000374399 PGK2P07205 417 aa17.54■□□□□ 0.4
NIPAL3-204ENST00000374399 PRCPP42785 496 aa17.54■□□□□ 0.4
NIPAL3-204ENST00000374399 STK4Q13043 487 aa17.54■□□□□ 0.4
NIPAL3-204ENST00000374399 CT47A1Q5JQC4 288 aaPredicted RBP17.54■□□□□ 0.4
NIPAL3-204ENST00000374399 DYMQ7RTS9 669 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms