RNA–Protein interactions for RNA: ENST00000373583.5

HDAC8-208, Transcript of histone deacetylase 8, humanhuman

TSL 5 BASIC

Gene HDAC8, Length 434 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-208ENST00000373583 KIAA0753Q2KHM9 967 aa18.24■□□□□ 0.51
HDAC8-208ENST00000373583 CYFIP1Q7L576 1253 aa18.24■□□□□ 0.51
HDAC8-208ENST00000373583 FAM177A1Q8N128 213 aaPredicted RBP18.24■□□□□ 0.51
HDAC8-208ENST00000373583 REXO1Q8N1G1 1221 aaKnown RBP18.24■□□□□ 0.51
HDAC8-208ENST00000373583 CRYGNQ8WXF5 182 aa18.24■□□□□ 0.51
HDAC8-208ENST00000373583 GPR20Q99678 358 aa18.24■□□□□ 0.51
HDAC8-208ENST00000373583 BCAS3Q9H6U6 928 aa18.24■□□□□ 0.51
HDAC8-208ENST00000373583 SH3GLB2Q9NR46 395 aa18.24■□□□□ 0.51
HDAC8-208ENST00000373583 CYP2C9P11712 490 aa18.23■□□□□ 0.51
HDAC8-208ENST00000373583 GDF6Q6KF10 455 aaPredicted RBP18.23■□□□□ 0.51
HDAC8-208ENST00000373583 PSRC1Q6PGN9 363 aaPredicted RBP18.23■□□□□ 0.51
HDAC8-208ENST00000373583 CPLX2Q6PUV4 134 aaKnown RBP18.23■□□□□ 0.51
HDAC8-208ENST00000373583 NIPA1Q7RTP0 329 aa18.23■□□□□ 0.51
HDAC8-208ENST00000373583 C7orf31Q8N865 590 aa18.23■□□□□ 0.51
HDAC8-208ENST00000373583 BICD2Q8TD16 824 aa18.23■□□□□ 0.51
HDAC8-208ENST00000373583 PPP1R13LQ8WUF5 828 aa18.23■□□□□ 0.51
HDAC8-208ENST00000373583 PGBD1Q96JS3 809 aa18.23■□□□□ 0.51
HDAC8-208ENST00000373583 RNPC3Q96LT9 517 aaKnown RBP18.23■□□□□ 0.51
HDAC8-208ENST00000373583 CTAGE1Q96RT6 745 aa18.23■□□□□ 0.51
HDAC8-208ENST00000373583 MXRA8Q9BRK3 442 aa18.23■□□□□ 0.51
HDAC8-208ENST00000373583 IL23AQ9NPF7 189 aa18.23■□□□□ 0.51
HDAC8-208ENST00000373583 TMEM260Q9NX78 707 aa18.23■□□□□ 0.51
HDAC8-208ENST00000373583 WDR81Q562E7 1941 aa18.23■□□□□ 0.51
HDAC8-208ENST00000373583 GBF1Q92538 1859 aa18.22■□□□□ 0.51
HDAC8-208ENST00000373583 ATP9AO75110 1047 aa18.22■□□□□ 0.51
HDAC8-208ENST00000373583 DEXIO95424 95 aa18.22■□□□□ 0.51
HDAC8-208ENST00000373583 SEC24BO95487 1268 aa18.22■□□□□ 0.51
HDAC8-208ENST00000373583 ARHGAP4P98171 946 aa18.22■□□□□ 0.51
HDAC8-208ENST00000373583 SSRP1Q08945 709 aaKnown RBP18.22■□□□□ 0.51
HDAC8-208ENST00000373583 RBL2Q08999 1139 aa18.22■□□□□ 0.51
HDAC8-208ENST00000373583 PTGISQ16647 500 aa18.22■□□□□ 0.51
HDAC8-208ENST00000373583 CEP55Q53EZ4 464 aa18.22■□□□□ 0.51
HDAC8-208ENST00000373583 CCDC155Q8N6L0 562 aa18.22■□□□□ 0.51
HDAC8-208ENST00000373583 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.22■□□□□ 0.514e-6■■■□□ 15.2
HDAC8-208ENST00000373583 LARP6Q9BRS8 491 aaKnown RBP18.22■□□□□ 0.51
HDAC8-208ENST00000373583 HDAC6Q9UBN7 1215 aa18.22■□□□□ 0.51
HDAC8-208ENST00000373583 NOD1Q9Y239 953 aa18.22■□□□□ 0.51
HDAC8-208ENST00000373583 H3BRB1 525 aa18.21■□□□□ 0.51
HDAC8-208ENST00000373583 PFKFB2O60825 505 aa18.21■□□□□ 0.51
HDAC8-208ENST00000373583 CDKL5O76039 1030 aa18.21■□□□□ 0.51
HDAC8-208ENST00000373583 PFKMP08237 780 aa18.21■□□□□ 0.51
HDAC8-208ENST00000373583 CYP3A4P08684 503 aa18.21■□□□□ 0.51
HDAC8-208ENST00000373583 HOXC8P31273 242 aa18.21■□□□□ 0.51
HDAC8-208ENST00000373583 AK2P54819 239 aa18.21■□□□□ 0.51
HDAC8-208ENST00000373583 CHMP4BP1P59074 171 aa18.21■□□□□ 0.51
HDAC8-208ENST00000373583 SCRN1Q12765 414 aa18.21■□□□□ 0.51
HDAC8-208ENST00000373583 STK3Q13188 491 aa18.21■□□□□ 0.51
HDAC8-208ENST00000373583 BFSP2Q13515 415 aa18.21■□□□□ 0.51
HDAC8-208ENST00000373583 C8orf34Q49A92 452 aa18.21■□□□□ 0.51
HDAC8-208ENST00000373583 TMEM240Q5SV17 173 aa18.21■□□□□ 0.51
HDAC8-208ENST00000373583 RASIP1Q5U651 963 aa18.21■□□□□ 0.51
HDAC8-208ENST00000373583 JAKMIP3Q5VZ66 844 aa18.21■□□□□ 0.51
HDAC8-208ENST00000373583 C16orf59Q7L2K0 433 aa18.21■□□□□ 0.51
HDAC8-208ENST00000373583 CAGE1Q8TC20 777 aa18.21■□□□□ 0.51
HDAC8-208ENST00000373583 ALG1Q9BT22 464 aa18.21■□□□□ 0.51
HDAC8-208ENST00000373583 SLKQ9H2G2 1235 aaPredicted RBP18.21■□□□□ 0.51
HDAC8-208ENST00000373583 TUT1Q9H6E5 874 aaKnown RBP18.21■□□□□ 0.51
HDAC8-208ENST00000373583 KCNH7Q9NS40 1196 aa18.21■□□□□ 0.51
HDAC8-208ENST00000373583 VPS54Q9P1Q0 977 aa18.21■□□□□ 0.51
HDAC8-208ENST00000373583 TPCN1Q9ULQ1 816 aa18.21■□□□□ 0.51
HDAC8-208ENST00000373583 NFASCO94856 1347 aa18.21■□□□□ 0.51
HDAC8-208ENST00000373583 STK36Q9NRP7 1315 aa18.21■□□□□ 0.51
HDAC8-208ENST00000373583 MEIS1O00470 390 aa18.2■□□□□ 0.5
HDAC8-208ENST00000373583 ADAMTS3O15072 1205 aa18.2■□□□□ 0.5
HDAC8-208ENST00000373583 PPFIA3O75145 1194 aa18.2■□□□□ 0.5
HDAC8-208ENST00000373583 RFC2P35250 354 aa18.2■□□□□ 0.5
HDAC8-208ENST00000373583 CCL23P55773 120 aa18.2■□□□□ 0.5
HDAC8-208ENST00000373583 SMAD3P84022 425 aaKnown RBP18.2■□□□□ 0.5
HDAC8-208ENST00000373583 ZNF215Q9UL58 517 aaPredicted RBP18.2■□□□□ 0.5
HDAC8-208ENST00000373583 TET1Q8NFU7 2136 aa18.19■□□□□ 0.5
HDAC8-208ENST00000373583 TCF7P36402 384 aaPredicted RBP18.19■□□□□ 0.5
HDAC8-208ENST00000373583 PTK7Q13308 1070 aa18.19■□□□□ 0.5
HDAC8-208ENST00000373583 RPUSD2Q8IZ73 545 aaKnown RBP18.19■□□□□ 0.5
HDAC8-208ENST00000373583 CYP2W1Q8TAV3 490 aa18.19■□□□□ 0.5
HDAC8-208ENST00000373583 AFAP1L1Q8TED9 768 aa18.19■□□□□ 0.5
HDAC8-208ENST00000373583 DHX38Q92620 1227 aaKnown RBP18.19■□□□□ 0.5
HDAC8-208ENST00000373583 JPH1Q9HDC5 661 aaPredicted RBP18.19■□□□□ 0.5
HDAC8-208ENST00000373583 TELO2Q9Y4R8 837 aa18.19■□□□□ 0.5
HDAC8-208ENST00000373583 EMSYQ7Z589 1322 aa18.19■□□□□ 0.5
HDAC8-208ENST00000373583 MYH9P35579 1960 aaKnown RBP18.19■□□□□ 0.5
HDAC8-208ENST00000373583 IGLV3-22A0A075B6J6 115 aa18.18■□□□□ 0.5
HDAC8-208ENST00000373583 SETQ01105 290 aaPredicted RBP18.18■□□□□ 0.5
HDAC8-208ENST00000373583 SP4Q02446 784 aa18.18■□□□□ 0.5
HDAC8-208ENST00000373583 FAM109BQ6ICB4 259 aaPredicted RBP18.18■□□□□ 0.5
HDAC8-208ENST00000373583 GALNT17Q6IS24 598 aa18.18■□□□□ 0.5
HDAC8-208ENST00000373583 ZNF365Q70YC5 407 aa18.18■□□□□ 0.5
HDAC8-208ENST00000373583 TRIM50Q86XT4 487 aa18.18■□□□□ 0.5
HDAC8-208ENST00000373583 RETREG2Q8NC44 543 aa18.18■□□□□ 0.5
HDAC8-208ENST00000373583 DAGLBQ8NCG7 672 aa18.18■□□□□ 0.5
HDAC8-208ENST00000373583 SEPT1Q8WYJ6 367 aa18.18■□□□□ 0.5
HDAC8-208ENST00000373583 HERVK_113Q902F9 699 aa18.18■□□□□ 0.5
HDAC8-208ENST00000373583 VWCEQ96DN2 955 aa18.18■□□□□ 0.5
HDAC8-208ENST00000373583 SCLYQ96I15 445 aa18.18■□□□□ 0.5
HDAC8-208ENST00000373583 AGO4Q9HCK5 861 aaKnown RBP18.18■□□□□ 0.5
HDAC8-208ENST00000373583 SLC9A2Q9UBY0 812 aa18.18■□□□□ 0.5
HDAC8-208ENST00000373583 SIP14410 1827 aa18.17■□□□□ 0.5
HDAC8-208ENST00000373583 GSTTP1A0A1W2PQM5 241 aa18.17■□□□□ 0.5
HDAC8-208ENST00000373583 FAM86B1E9PN63 330 aa18.17■□□□□ 0.5
HDAC8-208ENST00000373583 PARNO95453 639 aaKnown RBP18.17■□□□□ 0.5
HDAC8-208ENST00000373583 FAM86B2P0C5J1 330 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms