RNA–Protein interactions for RNA: ENST00000373386.6

GARNL3-201, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 3,143 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-201ENST00000373386 MCM3P25205 808 aa9.03□□□□□ -0.96
GARNL3-201ENST00000373386 GBP2P32456 591 aaPredicted RBP9.03□□□□□ -0.96
GARNL3-201ENST00000373386 TXLNAP40222 546 aa9.03□□□□□ -0.96
GARNL3-201ENST00000373386 ITIH3Q06033 890 aa9.03□□□□□ -0.96
GARNL3-201ENST00000373386 TUBB2AQ13885 445 aa9.03□□□□□ -0.96
GARNL3-201ENST00000373386 ARL6IP4Q66PJ3 421 aaKnown RBP9.03□□□□□ -0.96
GARNL3-201ENST00000373386 TMTC3Q6ZXV5 915 aa9.03□□□□□ -0.96
GARNL3-201ENST00000373386 RSPH3Q86UC2 560 aa9.03□□□□□ -0.96
GARNL3-201ENST00000373386 ENAHQ8N8S7 591 aaPredicted RBP9.03□□□□□ -0.96
GARNL3-201ENST00000373386 CCDC51Q96ER9 411 aa9.03□□□□□ -0.96
GARNL3-201ENST00000373386 TUBB2BQ9BVA1 445 aa9.03□□□□□ -0.96
GARNL3-201ENST00000373386 C2orf49Q9BVC5 232 aaPredicted RBP9.03□□□□□ -0.96
GARNL3-201ENST00000373386 NYXQ9GZU5 481 aa9.03□□□□□ -0.96
GARNL3-201ENST00000373386 ANKRD2Q9GZV1 360 aa9.03□□□□□ -0.96
GARNL3-201ENST00000373386 ARPP21Q9UBL0 812 aaPredicted RBP9.03□□□□□ -0.96
GARNL3-201ENST00000373386 TMED5Q9Y3A6 229 aa9.03□□□□□ -0.96
GARNL3-201ENST00000373386 NHSQ6T4R5 1651 aa9.03□□□□□ -0.96
GARNL3-201ENST00000373386 NUTM2BA6NNL0 878 aaPredicted RBP9.02□□□□□ -0.96
GARNL3-201ENST00000373386 NUTM2EB1AL46 878 aaPredicted RBP9.02□□□□□ -0.96
GARNL3-201ENST00000373386 ATP2C1P98194 919 aaPredicted RBP9.02□□□□□ -0.96
GARNL3-201ENST00000373386 ITPK1Q13572 414 aa9.02□□□□□ -0.96
GARNL3-201ENST00000373386 MAP7D1Q3KQU3 841 aa9.02□□□□□ -0.96
GARNL3-201ENST00000373386 SPATA1Q5VX52 437 aa9.02□□□□□ -0.96
GARNL3-201ENST00000373386 CCDC12Q8WUD4 166 aaPredicted RBP9.02□□□□□ -0.96
GARNL3-201ENST00000373386 MYL10Q9BUA6 226 aa9.02□□□□□ -0.96
GARNL3-201ENST00000373386 AKR1B15C9JRZ8 316 aaPredicted RBP9.02□□□□□ -0.97
GARNL3-201ENST00000373386 POLR2DO15514 142 aaKnown RBP9.02□□□□□ -0.97
GARNL3-201ENST00000373386 STAM2O75886 525 aa9.02□□□□□ -0.97
GARNL3-201ENST00000373386 HSPA1AP0DMV8 641 aaKnown RBP9.02□□□□□ -0.97
GARNL3-201ENST00000373386 HSPA1BP0DMV9 641 aaKnown RBP9.02□□□□□ -0.97
GARNL3-201ENST00000373386 INHBCP55103 352 aa9.02□□□□□ -0.97
GARNL3-201ENST00000373386 ADKP55263 362 aaKnown RBP9.02□□□□□ -0.97
GARNL3-201ENST00000373386 FMR1Q06787 632 aaKnown RBP eCLIP9.02□□□□□ -0.97
GARNL3-201ENST00000373386 IFIT1BQ5T764 474 aaKnown RBP9.02□□□□□ -0.97
GARNL3-201ENST00000373386 CDKAL1Q5VV42 579 aa9.02□□□□□ -0.97
GARNL3-201ENST00000373386 GALNT17Q6IS24 598 aa9.02□□□□□ -0.97
GARNL3-201ENST00000373386 DPY19L2Q6NUT2 758 aa9.02□□□□□ -0.97
GARNL3-201ENST00000373386 PCGF5Q86SE9 256 aa9.02□□□□□ -0.97
GARNL3-201ENST00000373386 CEP112Q8N8E3 955 aa9.02□□□□□ -0.97
GARNL3-201ENST00000373386 DHX58Q96C10 678 aa9.02□□□□□ -0.97
GARNL3-201ENST00000373386 PCDHB6Q9Y5E3 794 aa9.02□□□□□ -0.97
GARNL3-201ENST00000373386 FOXN1O15353 648 aa9.02□□□□□ -0.97
GARNL3-201ENST00000373386 P4HA2O15460 535 aa9.02□□□□□ -0.97
GARNL3-201ENST00000373386 SART1O43290 800 aaKnown RBP9.02□□□□□ -0.97
GARNL3-201ENST00000373386 B3GALNT1O75752 331 aa9.02□□□□□ -0.97
GARNL3-201ENST00000373386 PARP1P09874 1014 aaKnown RBP9.02□□□□□ -0.97
GARNL3-201ENST00000373386 HOXA7P31268 230 aaPredicted RBP9.02□□□□□ -0.97
GARNL3-201ENST00000373386 PBX1P40424 430 aa9.02□□□□□ -0.97
GARNL3-201ENST00000373386 DPYDQ12882 1025 aa9.02□□□□□ -0.97
GARNL3-201ENST00000373386 SLMAPQ14BN4 828 aa9.02□□□□□ -0.97
GARNL3-201ENST00000373386 CFAP58Q5T655 872 aa9.02□□□□□ -0.97
GARNL3-201ENST00000373386 FAM117BQ6P1L5 589 aa9.02□□□□□ -0.97
GARNL3-201ENST00000373386 TLDC1Q6P9B6 456 aa9.02□□□□□ -0.97
GARNL3-201ENST00000373386 FOXR1Q6PIV2 292 aa9.02□□□□□ -0.97
GARNL3-201ENST00000373386 ADGRA1Q86SQ6 560 aa9.02□□□□□ -0.97
GARNL3-201ENST00000373386 FUT8Q9BYC5 575 aa9.02□□□□□ -0.97
GARNL3-201ENST00000373386 PAPOLBQ9NRJ5 636 aaKnown RBP9.02□□□□□ -0.97
GARNL3-201ENST00000373386 TCP11L1Q9NUJ3 509 aa9.02□□□□□ -0.97
GARNL3-201ENST00000373386 SERTAD1Q9UHV2 236 aa9.02□□□□□ -0.97
GARNL3-201ENST00000373386 CNTNAP5Q8WYK1 1306 aa9.01□□□□□ -0.97
GARNL3-201ENST00000373386 DDX60LQ5H9U9 1706 aaKnown RBP9.01□□□□□ -0.97
GARNL3-201ENST00000373386 SGTAO43765 313 aa9.01□□□□□ -0.97
GARNL3-201ENST00000373386 NPY5RQ15761 445 aa9.01□□□□□ -0.97
GARNL3-201ENST00000373386 PTPN21Q16825 1174 aa9.01□□□□□ -0.97
GARNL3-201ENST00000373386 CCDC174Q6PII3 467 aa9.01□□□□□ -0.97
GARNL3-201ENST00000373386 SRGAP1Q7Z6B7 1085 aa9.01□□□□□ -0.97
GARNL3-201ENST00000373386 MARCH10Q8NA82 808 aaPredicted RBP9.01□□□□□ -0.97
GARNL3-201ENST00000373386 HNRNPLLQ8WVV9 542 aaKnown RBP9.01□□□□□ -0.97
GARNL3-201ENST00000373386 ATRIPQ8WXE1 791 aa9.01□□□□□ -0.97
GARNL3-201ENST00000373386 NSUN4Q96CB9 384 aaKnown RBP9.01□□□□□ -0.97
GARNL3-201ENST00000373386 CSRNP2Q9H175 543 aa9.01□□□□□ -0.97
GARNL3-201ENST00000373386 AS3MTQ9HBK9 375 aa9.01□□□□□ -0.97
GARNL3-201ENST00000373386 DCAF16Q9NXF7 216 aa9.01□□□□□ -0.97
GARNL3-201ENST00000373386 MINPP1Q9UNW1 487 aa9.01□□□□□ -0.97
GARNL3-201ENST00000373386 KCNJ14Q9UNX9 436 aa9.01□□□□□ -0.97
GARNL3-201ENST00000373386 SLC30A1Q9Y6M5 507 aa9.01□□□□□ -0.97
GARNL3-201ENST00000373386 IRS2Q9Y4H2 1338 aa9.01□□□□□ -0.97
GARNL3-201ENST00000373386 SBF2Q86WG5 1849 aa9.01□□□□□ -0.97
GARNL3-201ENST00000373386 BAZ2AQ9UIF9 1905 aaKnown RBP9.01□□□□□ -0.97
GARNL3-201ENST00000373386 ANKRD65E5RJM6 399 aa9.01□□□□□ -0.97
GARNL3-201ENST00000373386 CALML3P27482 149 aa9.01□□□□□ -0.97
GARNL3-201ENST00000373386 CHMP4BP1P59074 171 aa9.01□□□□□ -0.97
GARNL3-201ENST00000373386 KCTD2Q14681 263 aa9.01□□□□□ -0.97
GARNL3-201ENST00000373386 KARSQ15046 597 aaKnown RBP9.01□□□□□ -0.97
GARNL3-201ENST00000373386 LONRF2Q1L5Z9 754 aa9.01□□□□□ -0.97
GARNL3-201ENST00000373386 SPDYCQ5MJ68 293 aa9.01□□□□□ -0.97
GARNL3-201ENST00000373386 APTXQ7Z2E3 356 aaKnown RBP9.01□□□□□ -0.97
GARNL3-201ENST00000373386 PPFIBP1Q86W92 1011 aa9.01□□□□□ -0.97
GARNL3-201ENST00000373386 DAGLBQ8NCG7 672 aa9.01□□□□□ -0.97
GARNL3-201ENST00000373386 FAM84BQ96KN1 310 aaPredicted RBP9.01□□□□□ -0.97
GARNL3-201ENST00000373386 LY75O60449 1722 aa9.01□□□□□ -0.97
GARNL3-201ENST00000373386 EVI5O60447 810 aa9□□□□□ -0.97
GARNL3-201ENST00000373386 LDHCP07864 332 aa9□□□□□ -0.97
GARNL3-201ENST00000373386 PDE6BP35913 854 aa9□□□□□ -0.97
GARNL3-201ENST00000373386 TCF7P36402 384 aaPredicted RBP9□□□□□ -0.97
GARNL3-201ENST00000373386 CCT8P50990 548 aa9□□□□□ -0.97
GARNL3-201ENST00000373386 SPAG1Q07617 926 aa9□□□□□ -0.97
GARNL3-201ENST00000373386 TRIM14Q14142 442 aa9□□□□□ -0.97
GARNL3-201ENST00000373386 PFKFB3Q16875 520 aaPredicted RBP9□□□□□ -0.97
GARNL3-201ENST00000373386 HSP90AA4PQ58FG1 418 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms