RNA–Protein interactions for RNA: ENST00000373316.4

PGK1-201, Transcript of phosphoglycerate kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGK1, Length 4,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-201ENST00000373316 VEZTQ9HBM0 779 aa11.57□□□□□ -0.56
PGK1-201ENST00000373316 PNMA6FA0A0J9YX94 578 aa11.57□□□□□ -0.56
PGK1-201ENST00000373316 TLDC2A0PJX2 215 aa11.57□□□□□ -0.56
PGK1-201ENST00000373316 PRDM1O75626 825 aa11.57□□□□□ -0.56
PGK1-201ENST00000373316 DDIT3P35638 169 aa11.57□□□□□ -0.56
PGK1-201ENST00000373316 LONRF3Q496Y0 759 aa11.57□□□□□ -0.56
PGK1-201ENST00000373316 CERKLQ49MI3 558 aaPredicted RBP11.57□□□□□ -0.56
PGK1-201ENST00000373316 FAM160B1Q5W0V3 765 aa11.57□□□□□ -0.56
PGK1-201ENST00000373316 FAM178BQ8IXR5 827 aa11.57□□□□□ -0.56
PGK1-201ENST00000373316 ATP6V0A1Q93050 837 aa11.57□□□□□ -0.56
PGK1-201ENST00000373316 PAIP2Q9BPZ3 127 aaKnown RBP11.57□□□□□ -0.56
PGK1-201ENST00000373316 DISC1Q9NRI5 854 aa11.57□□□□□ -0.56
PGK1-201ENST00000373316 GJB4Q9NTQ9 266 aa11.57□□□□□ -0.56
PGK1-201ENST00000373316 SLC5A4Q9NY91 659 aa11.57□□□□□ -0.56
PGK1-201ENST00000373316 KLHL14Q9P2G3 628 aa11.57□□□□□ -0.56
PGK1-201ENST00000373316 SEL1LQ9UBV2 794 aa11.57□□□□□ -0.56
PGK1-201ENST00000373316 NOL3O60936 208 aaKnown RBP11.56□□□□□ -0.56
PGK1-201ENST00000373316 FDX1P10109 184 aa11.56□□□□□ -0.56
PGK1-201ENST00000373316 CHRNA5P30532 468 aa11.56□□□□□ -0.56
PGK1-201ENST00000373316 DYMQ7RTS9 669 aa11.56□□□□□ -0.56
PGK1-201ENST00000373316 FAM207AQ9NSI2 230 aaPredicted RBP11.56□□□□□ -0.56
PGK1-201ENST00000373316 BIN2Q9UBW5 565 aaPredicted RBP11.56□□□□□ -0.56
PGK1-201ENST00000373316 COL5A3P25940 1745 aaPredicted RBP11.56□□□□□ -0.56
PGK1-201ENST00000373316 ANKRD36CQ5JPF3 1778 aa11.56□□□□□ -0.56
PGK1-201ENST00000373316 RBL2Q08999 1139 aa11.56□□□□□ -0.56
PGK1-201ENST00000373316 ZNF772Q68DY9 489 aaPredicted RBP11.56□□□□□ -0.56
PGK1-201ENST00000373316 MB21D1Q8N884 522 aa11.56□□□□□ -0.56
PGK1-201ENST00000373316 MYO3BQ8WXR4 1341 aa11.56□□□□□ -0.56
PGK1-201ENST00000373316 SBF2Q86WG5 1849 aa11.56□□□□□ -0.56
PGK1-201ENST00000373316 DDX60Q8IY21 1712 aaKnown RBP11.56□□□□□ -0.56
PGK1-201ENST00000373316 MYH3P11055 1940 aa11.56□□□□□ -0.56
PGK1-201ENST00000373316 LGALS16A8MUM7 142 aa11.56□□□□□ -0.56
PGK1-201ENST00000373316 UBE2Q2LH0YL09 131 aa11.56□□□□□ -0.56
PGK1-201ENST00000373316 NDUFA10O95299 355 aa11.56□□□□□ -0.56
PGK1-201ENST00000373316 TECP42680 631 aa11.56□□□□□ -0.56
PGK1-201ENST00000373316 EIF6P56537 245 aaKnown RBP11.56□□□□□ -0.56
PGK1-201ENST00000373316 EXOSC10Q01780 885 aaKnown RBP11.56□□□□□ -0.56
PGK1-201ENST00000373316 DIXDC1Q155Q3 683 aa11.56□□□□□ -0.56
PGK1-201ENST00000373316 RC3H1Q5TC82 1133 aaKnown RBP11.56□□□□□ -0.56
PGK1-201ENST00000373316 SLFN13Q68D06 897 aa11.56□□□□□ -0.56
PGK1-201ENST00000373316 KRT39Q6A163 491 aa11.56□□□□□ -0.56
PGK1-201ENST00000373316 U2AF1L4Q8WU68 220 aaKnown RBP11.56□□□□□ -0.56
PGK1-201ENST00000373316 CFAP57Q96MR6 1250 aa11.56□□□□□ -0.56
PGK1-201ENST00000373316 TIPINQ9BVW5 301 aa11.56□□□□□ -0.56
PGK1-201ENST00000373316 COA1Q9GZY4 146 aa11.56□□□□□ -0.56
PGK1-201ENST00000373316 NRBP2Q9NSY0 501 aa11.56□□□□□ -0.56
PGK1-201ENST00000373316 CEP72Q9P209 647 aa11.56□□□□□ -0.56
PGK1-201ENST00000373316 SLURP2P0DP57 97 aa11.55□□□□□ -0.56
PGK1-201ENST00000373316 NR1H3Q13133 447 aa11.55□□□□□ -0.56
PGK1-201ENST00000373316 DCUN1D2Q6PH85 259 aa11.55□□□□□ -0.56
PGK1-201ENST00000373316 FAN1Q9Y2M0 1017 aa11.55□□□□□ -0.56
PGK1-201ENST00000373316 C4BP0C0L5 1744 aa11.55□□□□□ -0.56
PGK1-201ENST00000373316 A0A087WUV0 522 aaPredicted RBP11.55□□□□□ -0.56
PGK1-201ENST00000373316 GGPS1O95749 300 aa11.55□□□□□ -0.56
PGK1-201ENST00000373316 LRMPQ12912 555 aa11.55□□□□□ -0.56
PGK1-201ENST00000373316 GRAPQ13588 217 aa11.55□□□□□ -0.56
PGK1-201ENST00000373316 TFDP1Q14186 410 aa11.55□□□□□ -0.56
PGK1-201ENST00000373316 NIM1KQ8IY84 436 aa11.55□□□□□ -0.56
PGK1-201ENST00000373316 CCDC63Q8NA47 563 aa11.55□□□□□ -0.56
PGK1-201ENST00000373316 GRAPLQ8TC17 118 aaPredicted RBP11.55□□□□□ -0.56
PGK1-201ENST00000373316 ZNF384Q8TF68 577 aa11.55□□□□□ -0.56
PGK1-201ENST00000373316 KIAA1586Q9HCI6 787 aa11.55□□□□□ -0.56
PGK1-201ENST00000373316 MRPL47Q9HD33 250 aaKnown RBP11.55□□□□□ -0.56
PGK1-201ENST00000373316 TACC3Q9Y6A5 838 aa11.55□□□□□ -0.56
PGK1-201ENST00000373316 COL1A1P02452 1464 aaPredicted RBP11.55□□□□□ -0.56
PGK1-201ENST00000373316 E7EVH7 732 aa11.55□□□□□ -0.56
PGK1-201ENST00000373316 GNGT1P63211 74 aa11.55□□□□□ -0.56
PGK1-201ENST00000373316 MYL7Q01449 175 aa11.55□□□□□ -0.56
PGK1-201ENST00000373316 ICA1Q05084 483 aa11.55□□□□□ -0.56
PGK1-201ENST00000373316 DMP1Q13316 513 aaPredicted RBP11.55□□□□□ -0.56
PGK1-201ENST00000373316 NEDD9Q14511 834 aa11.55□□□□□ -0.56
PGK1-201ENST00000373316 FAM47AQ5JRC9 791 aa11.55□□□□□ -0.56
PGK1-201ENST00000373316 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.55□□□□□ -0.56
PGK1-201ENST00000373316 TNNC2P02585 160 aa11.55□□□□□ -0.56
PGK1-201ENST00000373316 GRM4Q14833 912 aa11.55□□□□□ -0.56
PGK1-201ENST00000373316 CCDC25Q86WR0 208 aa11.55□□□□□ -0.56
PGK1-201ENST00000373316 CMTR1Q8N1G2 835 aaKnown RBP11.55□□□□□ -0.56
PGK1-201ENST00000373316 SLC35F6Q8N357 371 aa11.55□□□□□ -0.56
PGK1-201ENST00000373316 GBP7Q8N8V2 638 aaPredicted RBP11.55□□□□□ -0.56
PGK1-201ENST00000373316 VIPAS39Q9H9C1 493 aa11.55□□□□□ -0.56
PGK1-201ENST00000373316 KCNQ5Q9NR82 932 aa11.55□□□□□ -0.56
PGK1-201ENST00000373316 PODXLO00592 558 aa11.54□□□□□ -0.56
PGK1-201ENST00000373316 KCNK3O14649 394 aa11.54□□□□□ -0.56
PGK1-201ENST00000373316 GPSM2P81274 684 aa11.54□□□□□ -0.56
PGK1-201ENST00000373316 PHLDB3Q6NSJ2 640 aa11.54□□□□□ -0.56
PGK1-201ENST00000373316 DEPTORQ8TB45 409 aa11.54□□□□□ -0.56
PGK1-201ENST00000373316 TACO1Q9BSH4 297 aaKnown RBP11.54□□□□□ -0.56
PGK1-201ENST00000373316 DOK7Q18PE1 504 aa11.54□□□□□ -0.56
PGK1-201ENST00000373316 TBC1D10CQ8IV04 446 aa11.54□□□□□ -0.56
PGK1-201ENST00000373316 ZC3H15Q8WU90 426 aaKnown RBP11.54□□□□□ -0.56
PGK1-201ENST00000373316 FAM20AQ96MK3 541 aa11.54□□□□□ -0.56
PGK1-201ENST00000373316 NT5C1BQ96P26 610 aa11.54□□□□□ -0.56
PGK1-201ENST00000373316 ZSWIM5Q9P217 1185 aa11.54□□□□□ -0.56
PGK1-201ENST00000373316 XPOTO43592 962 aaKnown RBP11.54□□□□□ -0.56
PGK1-201ENST00000373316 PTK2Q05397 1052 aa11.54□□□□□ -0.56
PGK1-201ENST00000373316 NNTQ13423 1086 aa11.54□□□□□ -0.56
PGK1-201ENST00000373316 MAP7D3Q8IWC1 876 aa11.54□□□□□ -0.56
PGK1-201ENST00000373316 KLHL7Q8IXQ5 586 aa11.54□□□□□ -0.56
PGK1-201ENST00000373316 CLIC6Q96NY7 704 aa11.54□□□□□ -0.56
PGK1-201ENST00000373316 FAM129AQ9BZQ8 928 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms