RNA–Protein interactions for RNA: ENST00000373243.6

NCDN-202, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-202ENST00000373243 USP17L5A8MUK1 530 aa13.25□□□□□ -0.29
NCDN-202ENST00000373243 GNPTABQ3T906 1256 aa13.25□□□□□ -0.29
NCDN-202ENST00000373243 BSDC1Q9NW68 430 aaPredicted RBP13.25□□□□□ -0.29
NCDN-202ENST00000373243 ZBTB21Q9ULJ3 1066 aa13.25□□□□□ -0.29
NCDN-202ENST00000373243 MEFVO15553 781 aaPredicted RBP13.25□□□□□ -0.29
NCDN-202ENST00000373243 PYGLP06737 847 aa13.25□□□□□ -0.29
NCDN-202ENST00000373243 SNAP25P60880 206 aa13.25□□□□□ -0.29
NCDN-202ENST00000373243 CCNI2Q6ZMN8 369 aaPredicted RBP13.25□□□□□ -0.29
NCDN-202ENST00000373243 C3orf67Q6ZVT6 689 aa13.25□□□□□ -0.29
NCDN-202ENST00000373243 MARCH10Q8NA82 808 aaPredicted RBP13.25□□□□□ -0.29
NCDN-202ENST00000373243 RETREG2Q8NC44 543 aa13.25□□□□□ -0.29
NCDN-202ENST00000373243 MSANTD4Q8NCY6 345 aa13.25□□□□□ -0.29
NCDN-202ENST00000373243 RIOK1Q9BRS2 568 aaKnown RBP13.25□□□□□ -0.29
NCDN-202ENST00000373243 NFAT5O94916 1531 aa13.24□□□□□ -0.29
NCDN-202ENST00000373243 KRIT1O00522 736 aa13.24□□□□□ -0.29
NCDN-202ENST00000373243 CLIC2O15247 247 aa13.24□□□□□ -0.29
NCDN-202ENST00000373243 GCNT3O95395 438 aa13.24□□□□□ -0.29
NCDN-202ENST00000373243 PPP1R2P41236 205 aa13.24□□□□□ -0.29
NCDN-202ENST00000373243 EPHB4P54760 987 aa13.24□□□□□ -0.29
NCDN-202ENST00000373243 MYO1EQ12965 1108 aa13.24□□□□□ -0.29
NCDN-202ENST00000373243 TBC1D10BQ4KMP7 808 aaPredicted RBP13.24□□□□□ -0.29
NCDN-202ENST00000373243 PRR16Q569H4 304 aa13.24□□□□□ -0.29
NCDN-202ENST00000373243 CAPRIN2Q6IMN6 1127 aaKnown RBP13.24□□□□□ -0.29
NCDN-202ENST00000373243 TXNRD3Q86VQ6 643 aa13.24□□□□□ -0.29
NCDN-202ENST00000373243 CNBD1Q8NA66 436 aa13.24□□□□□ -0.29
NCDN-202ENST00000373243 HNRNPLLQ8WVV9 542 aaKnown RBP13.24□□□□□ -0.29
NCDN-202ENST00000373243 DDX25Q9UHL0 483 aaKnown RBP13.24□□□□□ -0.29
NCDN-202ENST00000373243 ITIH6Q6UXX5 1313 aa13.24□□□□□ -0.29
NCDN-202ENST00000373243 GCOM1H8Y6P7 765 aaPredicted RBP13.24□□□□□ -0.29
NCDN-202ENST00000373243 MYZAPP0CAP1 466 aa13.24□□□□□ -0.29
NCDN-202ENST00000373243 SRGNP10124 158 aa13.24□□□□□ -0.29
NCDN-202ENST00000373243 IFI16Q16666 785 aaKnown RBP13.24□□□□□ -0.29
NCDN-202ENST00000373243 DGKHQ86XP1 1220 aa13.24□□□□□ -0.29
NCDN-202ENST00000373243 SNX12Q9UMY4 172 aa13.24□□□□□ -0.29
NCDN-202ENST00000373243 GSTTP1A0A1W2PQM5 241 aa13.24□□□□□ -0.29
NCDN-202ENST00000373243 SPDYE3A6NKU9 549 aa13.24□□□□□ -0.29
NCDN-202ENST00000373243 ADAMTS3O15072 1205 aa13.24□□□□□ -0.29
NCDN-202ENST00000373243 FKBP3Q00688 224 aaKnown RBP13.24□□□□□ -0.29
NCDN-202ENST00000373243 GUCY1A3Q02108 690 aa13.24□□□□□ -0.29
NCDN-202ENST00000373243 TBC1D9BQ66K14 1250 aa13.24□□□□□ -0.29
NCDN-202ENST00000373243 SLF2Q8IX21 1173 aa13.24□□□□□ -0.29
NCDN-202ENST00000373243 FNBP4Q8N3X1 1017 aaPredicted RBP13.24□□□□□ -0.29
NCDN-202ENST00000373243 CTDP1Q9Y5B0 961 aaPredicted RBP13.24□□□□□ -0.29
NCDN-202ENST00000373243 TOPAZ1Q8N9V7 1692 aa13.23□□□□□ -0.29
NCDN-202ENST00000373243 RCCD1A6NED2 376 aa13.23□□□□□ -0.29
NCDN-202ENST00000373243 SFI1A8K8P3 1242 aa13.23□□□□□ -0.29
NCDN-202ENST00000373243 GOLGA8KD6RF30 607 aa13.23□□□□□ -0.29
NCDN-202ENST00000373243 E9PMD0 336 aa13.23□□□□□ -0.29
NCDN-202ENST00000373243 PDE2AO00408 941 aaPredicted RBP13.23□□□□□ -0.29
NCDN-202ENST00000373243 HLA-DOAP06340 250 aa13.23□□□□□ -0.29
NCDN-202ENST00000373243 PCP11498 1178 aaKnown RBP13.23□□□□□ -0.29
NCDN-202ENST00000373243 NR2F2P24468 414 aa13.23□□□□□ -0.29
NCDN-202ENST00000373243 CDK8P49336 464 aa13.23□□□□□ -0.29
NCDN-202ENST00000373243 TRAPPC11Q7Z392 1133 aa13.23□□□□□ -0.29
NCDN-202ENST00000373243 C3orf20Q8ND61 904 aa13.23□□□□□ -0.29
NCDN-202ENST00000373243 LMBR1Q8WVP7 490 aa13.23□□□□□ -0.29
NCDN-202ENST00000373243 MTRQ99707 1265 aa13.23□□□□□ -0.29
NCDN-202ENST00000373243 SUDS3Q9H7L9 328 aaPredicted RBP13.23□□□□□ -0.29
NCDN-202ENST00000373243 PSTPIP2Q9H939 334 aa13.23□□□□□ -0.29
NCDN-202ENST00000373243 SLC40A1Q9NP59 571 aa13.23□□□□□ -0.29
NCDN-202ENST00000373243 ARMCX3Q9UH62 379 aaPredicted RBP13.23□□□□□ -0.29
NCDN-202ENST00000373243 CCNL1Q9UK58 526 aaPredicted RBP13.23□□□□□ -0.29
NCDN-202ENST00000373243 RIC1Q4ADV7 1423 aa13.23□□□□□ -0.29
NCDN-202ENST00000373243 ZSCAN5CA6NGD5 496 aaPredicted RBP13.23□□□□□ -0.29
NCDN-202ENST00000373243 FAM13AO94988 1023 aa13.23□□□□□ -0.29
NCDN-202ENST00000373243 APBA1Q02410 837 aa13.23□□□□□ -0.29
NCDN-202ENST00000373243 USP4Q13107 963 aa13.23□□□□□ -0.29
NCDN-202ENST00000373243 ITPK1Q13572 414 aa13.23□□□□□ -0.29
NCDN-202ENST00000373243 IL17AQ16552 155 aa13.23□□□□□ -0.29
NCDN-202ENST00000373243 PARP9Q8IXQ6 854 aa13.23□□□□□ -0.29
NCDN-202ENST00000373243 ERMNQ8TAM6 284 aa13.23□□□□□ -0.29
NCDN-202ENST00000373243 CEP95Q96GE4 821 aa13.23□□□□□ -0.29
NCDN-202ENST00000373243 FAM210AQ96ND0 272 aa13.23□□□□□ -0.29
NCDN-202ENST00000373243 RBM12Q9NTZ6 932 aaKnown RBP13.23□□□□□ -0.29
NCDN-202ENST00000373243 ADAMTSL3P82987 1691 aa13.23□□□□□ -0.29
NCDN-202ENST00000373243 FAM196BA6NMK8 535 aa13.23□□□□□ -0.29
NCDN-202ENST00000373243 GJC1P36383 396 aa13.23□□□□□ -0.29
NCDN-202ENST00000373243 RPS6KA3P51812 740 aa13.23□□□□□ -0.29
NCDN-202ENST00000373243 NKX1-1Q15270 411 aaPredicted RBP13.23□□□□□ -0.29
NCDN-202ENST00000373243 ARFGAP2Q8N6H7 521 aa13.23□□□□□ -0.29
NCDN-202ENST00000373243 RGPD1P0DJD0 1748 aa13.22□□□□□ -0.29
NCDN-202ENST00000373243 LTN1O94822 1766 aa13.22□□□□□ -0.29
NCDN-202ENST00000373243 RGPD2P0DJD1 1756 aa13.22□□□□□ -0.29
NCDN-202ENST00000373243 A0A1W2PQC6 194 aa13.22□□□□□ -0.29
NCDN-202ENST00000373243 PSMD14O00487 310 aa13.22□□□□□ -0.29
NCDN-202ENST00000373243 EIF3HO15372 352 aaKnown RBP eCLIP13.22□□□□□ -0.29
NCDN-202ENST00000373243 ECEL1O95672 775 aa13.22□□□□□ -0.29
NCDN-202ENST00000373243 SYF2O95926 243 aaKnown RBP13.22□□□□□ -0.29
NCDN-202ENST00000373243 VIMP08670 466 aaKnown RBP13.22□□□□□ -0.29
NCDN-202ENST00000373243 CARSP49589 748 aaKnown RBP13.22□□□□□ -0.29
NCDN-202ENST00000373243 RCAN1P53805 252 aa13.22□□□□□ -0.29
NCDN-202ENST00000373243 GIMAP8Q8ND71 665 aaPredicted RBP13.22□□□□□ -0.29
NCDN-202ENST00000373243 ZC3H12CQ9C0D7 883 aaKnown RBP13.22□□□□□ -0.29
NCDN-202ENST00000373243 ZCWPW1Q9H0M4 648 aa13.22□□□□□ -0.29
NCDN-202ENST00000373243 A1CFQ9NQ94 594 aaKnown RBP13.22□□□□□ -0.29
NCDN-202ENST00000373243 BARHL2Q9NY43 387 aa13.22□□□□□ -0.29
NCDN-202ENST00000373243 COL4A3BPQ9Y5P4 624 aa13.22□□□□□ -0.29
NCDN-202ENST00000373243 MYMKA6NI61 221 aa13.22□□□□□ -0.29
NCDN-202ENST00000373243 ZYXQ15942 572 aaKnown RBP13.22□□□□□ -0.29
NCDN-202ENST00000373243 CCDC13Q8IYE1 715 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms