RNA–Protein interactions for RNA: ENST00000372917.8

TRERF1-203, Transcript of transcriptional regulating factor 1, humanhuman

TSL 1 (best) BASIC

Gene TRERF1, Length 3,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-203ENST00000372917 KRT9P35527 623 aa11.6□□□□□ -0.55
TRERF1-203ENST00000372917 COPS2P61201 443 aa11.6□□□□□ -0.55
TRERF1-203ENST00000372917 LSAMPQ13449 338 aa11.6□□□□□ -0.55
TRERF1-203ENST00000372917 NECTIN1Q15223 517 aa11.6□□□□□ -0.55
TRERF1-203ENST00000372917 ZNF362Q5T0B9 420 aaPredicted RBP11.6□□□□□ -0.55
TRERF1-203ENST00000372917 RALYLQ86SE5 291 aaKnown RBP11.6□□□□□ -0.55
TRERF1-203ENST00000372917 CHP1Q99653 195 aa11.6□□□□□ -0.55
TRERF1-203ENST00000372917 PDP2Q9P2J9 529 aa11.6□□□□□ -0.55
TRERF1-203ENST00000372917 ITGB1BP2Q9UKP3 347 aa11.6□□□□□ -0.55
TRERF1-203ENST00000372917 COMMD3-BMI1R4GMX3 469 aa11.6□□□□□ -0.55
TRERF1-203ENST00000372917 PTPDC1A2A3K4 754 aa11.6□□□□□ -0.55
TRERF1-203ENST00000372917 HEXIM1O94992 359 aaKnown RBP11.6□□□□□ -0.55
TRERF1-203ENST00000372917 TBL3Q12788 808 aaKnown RBP11.6□□□□□ -0.55
TRERF1-203ENST00000372917 CWF19L2Q2TBE0 894 aaKnown RBP11.6□□□□□ -0.55
TRERF1-203ENST00000372917 SOGA3Q5TF21 947 aa11.6□□□□□ -0.55
TRERF1-203ENST00000372917 EMC10Q5UCC4 262 aa11.6□□□□□ -0.55
TRERF1-203ENST00000372917 RETREG2Q8NC44 543 aa11.6□□□□□ -0.55
TRERF1-203ENST00000372917 UBLCP1Q8WVY7 318 aaPredicted RBP11.6□□□□□ -0.55
TRERF1-203ENST00000372917 PPP2R3CQ969Q6 453 aa11.6□□□□□ -0.55
TRERF1-203ENST00000372917 SNX27Q96L92 541 aa11.6□□□□□ -0.55
TRERF1-203ENST00000372917 CENPKQ9BS16 269 aa11.6□□□□□ -0.55
TRERF1-203ENST00000372917 MIS12Q9H081 205 aa11.6□□□□□ -0.55
TRERF1-203ENST00000372917 SLC4A7Q9Y6M7 1214 aa11.6□□□□□ -0.55
TRERF1-203ENST00000372917 PIK3C2BO00750 1634 aa11.6□□□□□ -0.55
TRERF1-203ENST00000372917 RAD21O60216 631 aa11.6□□□□□ -0.55
TRERF1-203ENST00000372917 ZMYM6O95789 1325 aa11.6□□□□□ -0.55
TRERF1-203ENST00000372917 HALP42357 657 aa11.6□□□□□ -0.55
TRERF1-203ENST00000372917 IFNAR2P48551 515 aa11.6□□□□□ -0.55
TRERF1-203ENST00000372917 CD97P48960 835 aa11.6□□□□□ -0.55
TRERF1-203ENST00000372917 NMIQ13287 307 aaPredicted RBP11.6□□□□□ -0.55
TRERF1-203ENST00000372917 KLC3Q6P597 504 aa11.6□□□□□ -0.55
TRERF1-203ENST00000372917 DLG5Q8TDM6 1919 aa11.6□□□□□ -0.55
TRERF1-203ENST00000372917 IFT43Q96FT9 208 aa11.6□□□□□ -0.55
TRERF1-203ENST00000372917 EIF2AQ9BY44 585 aaKnown RBP11.6□□□□□ -0.55
TRERF1-203ENST00000372917 ALKQ9UM73 1620 aa11.6□□□□□ -0.55
TRERF1-203ENST00000372917 MAP3K19Q56UN5 1328 aa11.59□□□□□ -0.55
TRERF1-203ENST00000372917 CCDC160A6NGH7 325 aa11.59□□□□□ -0.55
TRERF1-203ENST00000372917 TPPPO94811 219 aa11.59□□□□□ -0.55
TRERF1-203ENST00000372917 NDUFA10O95299 355 aa11.59□□□□□ -0.55
TRERF1-203ENST00000372917 FGFR1OPO95684 399 aaKnown RBP11.59□□□□□ -0.55
TRERF1-203ENST00000372917 BAG3O95817 575 aa11.59□□□□□ -0.55
TRERF1-203ENST00000372917 PDGFRBP09619 1106 aa11.59□□□□□ -0.55
TRERF1-203ENST00000372917 HPCAP84074 193 aa11.59□□□□□ -0.55
TRERF1-203ENST00000372917 FKBP4Q02790 459 aaKnown RBP eCLIP11.59□□□□□ -0.55
TRERF1-203ENST00000372917 ESCO1Q5FWF5 840 aa11.59□□□□□ -0.55
TRERF1-203ENST00000372917 HAUS3Q68CZ6 603 aa11.59□□□□□ -0.55
TRERF1-203ENST00000372917 SYNCQ9H7C4 482 aa11.59□□□□□ -0.55
TRERF1-203ENST00000372917 AASDHPPTQ9NRN7 309 aa11.59□□□□□ -0.55
TRERF1-203ENST00000372917 TAF6LQ9Y6J9 622 aa11.59□□□□□ -0.55
TRERF1-203ENST00000372917 GOLGA8AA7E2F4 631 aa11.59□□□□□ -0.55
TRERF1-203ENST00000372917 TACC1O75410 805 aa11.59□□□□□ -0.55
TRERF1-203ENST00000372917 GNAZP19086 355 aa11.59□□□□□ -0.55
TRERF1-203ENST00000372917 CCR3P51677 355 aa11.59□□□□□ -0.55
TRERF1-203ENST00000372917 KRT71Q3SY84 523 aa11.59□□□□□ -0.55
TRERF1-203ENST00000372917 SH3D19Q5HYK7 790 aa11.59□□□□□ -0.55
TRERF1-203ENST00000372917 SPATA24Q86W54 205 aa11.59□□□□□ -0.55
TRERF1-203ENST00000372917 LRRC34Q8IZ02 419 aa11.59□□□□□ -0.55
TRERF1-203ENST00000372917 STK32AQ8WU08 396 aa11.59□□□□□ -0.55
TRERF1-203ENST00000372917 LRCH1Q9Y2L9 728 aa11.59□□□□□ -0.55
TRERF1-203ENST00000372917 POTEFA5A3E0 1075 aa11.59□□□□□ -0.55
TRERF1-203ENST00000372917 YEATS4O95619 227 aa11.59□□□□□ -0.55
TRERF1-203ENST00000372917 CEBPAP49715 358 aaPredicted RBP11.59□□□□□ -0.55
TRERF1-203ENST00000372917 SH3BGRP55822 239 aaPredicted RBP11.59□□□□□ -0.55
TRERF1-203ENST00000372917 ITIH4Q14624 930 aa11.59□□□□□ -0.55
TRERF1-203ENST00000372917 CHADLQ6NUI6 762 aa11.59□□□□□ -0.55
TRERF1-203ENST00000372917 TRIM67Q6ZTA4 783 aa11.59□□□□□ -0.55
TRERF1-203ENST00000372917 FERMT2Q96AC1 680 aa11.59□□□□□ -0.55
TRERF1-203ENST00000372917 SLC39A3Q9BRY0 314 aa11.59□□□□□ -0.55
TRERF1-203ENST00000372917 ETNK1Q9HBU6 452 aa11.59□□□□□ -0.55
TRERF1-203ENST00000372917 TUBE1Q9UJT0 475 aa11.59□□□□□ -0.55
TRERF1-203ENST00000372917 NEDD4P46934 1319 aa11.58□□□□□ -0.55
TRERF1-203ENST00000372917 A6NJR5 290 aa11.58□□□□□ -0.56
TRERF1-203ENST00000372917 GYPCP04921 128 aa11.58□□□□□ -0.56
TRERF1-203ENST00000372917 PLCG2P16885 1265 aa11.58□□□□□ -0.56
TRERF1-203ENST00000372917 PIP4K2AP48426 406 aaPredicted RBP11.58□□□□□ -0.56
TRERF1-203ENST00000372917 TMED10P49755 219 aaKnown RBP11.58□□□□□ -0.56
TRERF1-203ENST00000372917 USH1GQ495M9 461 aa11.58□□□□□ -0.56
TRERF1-203ENST00000372917 RBBP8NLQ8NC74 664 aaPredicted RBP11.58□□□□□ -0.56
TRERF1-203ENST00000372917 FAM227BQ96M60 508 aa11.58□□□□□ -0.56
TRERF1-203ENST00000372917 RAB3IPQ96QF0 476 aaPredicted RBP11.58□□□□□ -0.56
TRERF1-203ENST00000372917 CCT7Q99832 543 aa11.58□□□□□ -0.56
TRERF1-203ENST00000372917 RETREG1Q9H6L5 497 aa11.58□□□□□ -0.56
TRERF1-203ENST00000372917 PNMA3Q9UL41 463 aa11.58□□□□□ -0.56
TRERF1-203ENST00000372917 ZNF148Q9UQR1 794 aa11.58□□□□□ -0.56
TRERF1-203ENST00000372917 CARD8Q9Y2G2 431 aa11.58□□□□□ -0.56
TRERF1-203ENST00000372917 AFF2P51816 1311 aa11.58□□□□□ -0.56
TRERF1-203ENST00000372917 PDE5AO76074 875 aa11.58□□□□□ -0.56
TRERF1-203ENST00000372917 ZFYP08048 801 aaPredicted RBP11.58□□□□□ -0.56
TRERF1-203ENST00000372917 POTEIP0CG38 1075 aa11.58□□□□□ -0.56
TRERF1-203ENST00000372917 KCNA2P16389 499 aa11.58□□□□□ -0.56
TRERF1-203ENST00000372917 TMEM214Q6NUQ4 689 aaKnown RBP11.58□□□□□ -0.56
TRERF1-203ENST00000372917 CD302Q8IX05 232 aa11.58□□□□□ -0.56
TRERF1-203ENST00000372917 RAPGEF4Q8WZA2 1011 aa11.58□□□□□ -0.56
TRERF1-203ENST00000372917 TIPINQ9BVW5 301 aa11.58□□□□□ -0.56
TRERF1-203ENST00000372917 NSRP1Q9H0G5 558 aaKnown RBP11.58□□□□□ -0.56
TRERF1-203ENST00000372917 ABHD10Q9NUJ1 306 aa11.58□□□□□ -0.56
TRERF1-203ENST00000372917 DACH1Q9UI36 760 aa11.58□□□□□ -0.56
TRERF1-203ENST00000372917 NDUFB9Q9Y6M9 179 aa11.58□□□□□ -0.56
TRERF1-203ENST00000372917 NPHP3-ACAD11A0A0J9YXS1 232 aa11.58□□□□□ -0.56
TRERF1-203ENST00000372917 ZPR1O75312 459 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms