RNA–Protein interactions for RNA: ENST00000372736.3

COL9A2-201, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 319 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-201ENST00000372736 IL23AQ9NPF7 189 aa25.95■■□□□ 1.74
COL9A2-201ENST00000372736 HDAC6Q9UBN7 1215 aa25.95■■□□□ 1.74
COL9A2-201ENST00000372736 SCN5AQ14524 2016 aa25.95■■□□□ 1.74
COL9A2-201ENST00000372736 NOP56O00567 594 aaKnown RBP25.94■■□□□ 1.74
COL9A2-201ENST00000372736 ADAMTS3O15072 1205 aa25.94■■□□□ 1.74
COL9A2-201ENST00000372736 ATP9AO75110 1047 aa25.94■■□□□ 1.74
COL9A2-201ENST00000372736 LGALS2P05162 132 aa25.94■■□□□ 1.74
COL9A2-201ENST00000372736 MTMR1Q13613 665 aa25.94■■□□□ 1.74
COL9A2-201ENST00000372736 PTGISQ16647 500 aa25.94■■□□□ 1.74
COL9A2-201ENST00000372736 PSRC1Q6PGN9 363 aaPredicted RBP25.94■■□□□ 1.74
COL9A2-201ENST00000372736 JADE2Q9NQC1 790 aa25.94■■□□□ 1.74
COL9A2-201ENST00000372736 SREBF1P36956 1147 aa25.93■■□□□ 1.74
COL9A2-201ENST00000372736 AKAP17AQ02040 695 aaKnown RBP25.93■■□□□ 1.74
COL9A2-201ENST00000372736 C7orf31Q8N865 590 aa25.93■■□□□ 1.74
COL9A2-201ENST00000372736 CCDC12Q8WUD4 166 aaPredicted RBP25.93■■□□□ 1.74
COL9A2-201ENST00000372736 VWCEQ96DN2 955 aa25.93■■□□□ 1.74
COL9A2-201ENST00000372736 SCLYQ96I15 445 aa25.93■■□□□ 1.74
COL9A2-201ENST00000372736 NOD1Q9Y239 953 aa25.93■■□□□ 1.74
COL9A2-201ENST00000372736 TRIP12Q14669 1992 aaPredicted RBP25.93■■□□□ 1.74
COL9A2-201ENST00000372736 PITPNM1O00562 1244 aa25.92■■□□□ 1.74
COL9A2-201ENST00000372736 RASIP1Q5U651 963 aa25.92■■□□□ 1.74
COL9A2-201ENST00000372736 ZNF365Q70YC5 407 aa25.92■■□□□ 1.74
COL9A2-201ENST00000372736 GIMAP8Q8ND71 665 aaPredicted RBP25.92■■□□□ 1.74
COL9A2-201ENST00000372736 SEC24BO95487 1268 aa25.91■■□□□ 1.74
COL9A2-201ENST00000372736 SMAD3P84022 425 aaKnown RBP25.91■■□□□ 1.74
COL9A2-201ENST00000372736 SP4Q02446 784 aa25.91■■□□□ 1.74
COL9A2-201ENST00000372736 STK3Q13188 491 aa25.91■■□□□ 1.74
COL9A2-201ENST00000372736 JAKMIP3Q5VZ66 844 aa25.91■■□□□ 1.74
COL9A2-201ENST00000372736 Q7L0L9 218 aa25.91■■□□□ 1.74
COL9A2-201ENST00000372736 TRIM50Q86XT4 487 aa25.91■■□□□ 1.74
COL9A2-201ENST00000372736 CYP2W1Q8TAV3 490 aa25.91■■□□□ 1.74
COL9A2-201ENST00000372736 DHX38Q92620 1227 aaKnown RBP25.91■■□□□ 1.74
COL9A2-201ENST00000372736 MXRA8Q9BRK3 442 aa25.91■■□□□ 1.74
COL9A2-201ENST00000372736 C6orf50Q9HD87 102 aa25.91■■□□□ 1.74
COL9A2-201ENST00000372736 PKD2L1Q9P0L9 805 aa25.91■■□□□ 1.74
COL9A2-201ENST00000372736 H3BRB1 525 aa25.9■■□□□ 1.74
COL9A2-201ENST00000372736 MAFGO15525 162 aa25.9■■□□□ 1.74
COL9A2-201ENST00000372736 BFSP2Q13515 415 aa25.9■■□□□ 1.74
COL9A2-201ENST00000372736 HIC1Q14526 733 aa25.9■■□□□ 1.74
COL9A2-201ENST00000372736 REXO1Q8N1G1 1221 aaKnown RBP25.9■■□□□ 1.74
COL9A2-201ENST00000372736 DEFB123Q8N688 67 aa25.9■■□□□ 1.74
COL9A2-201ENST00000372736 CRYGNQ8WXF5 182 aa25.9■■□□□ 1.74
COL9A2-201ENST00000372736 TUT1Q9H6E5 874 aaKnown RBP25.9■■□□□ 1.74
COL9A2-201ENST00000372736 KCNH7Q9NS40 1196 aa25.9■■□□□ 1.74
COL9A2-201ENST00000372736 VPS54Q9P1Q0 977 aa25.9■■□□□ 1.74
COL9A2-201ENST00000372736 EIF5BO60841 1220 aaKnown RBP25.89■■□□□ 1.74
COL9A2-201ENST00000372736 HOXC8P31273 242 aa25.89■■□□□ 1.74
COL9A2-201ENST00000372736 ARHGAP4P98171 946 aa25.89■■□□□ 1.74
COL9A2-201ENST00000372736 CEP55Q53EZ4 464 aa25.89■■□□□ 1.74
COL9A2-201ENST00000372736 CCDC148Q8NFR7 591 aa25.89■■□□□ 1.74
COL9A2-201ENST00000372736 CAGE1Q8TC20 777 aa25.89■■□□□ 1.74
COL9A2-201ENST00000372736 CPLX1O14810 134 aa25.88■■□□□ 1.73
COL9A2-201ENST00000372736 GNA11P29992 359 aa25.88■■□□□ 1.73
COL9A2-201ENST00000372736 ZNF200P98182 395 aaPredicted RBP25.88■■□□□ 1.73
COL9A2-201ENST00000372736 SSRP1Q08945 709 aaKnown RBP25.88■■□□□ 1.73
COL9A2-201ENST00000372736 RBL2Q08999 1139 aa25.88■■□□□ 1.73
COL9A2-201ENST00000372736 FAM109BQ6ICB4 259 aaPredicted RBP25.88■■□□□ 1.73
COL9A2-201ENST00000372736 TRIM22Q8IYM9 498 aa25.88■■□□□ 1.73
COL9A2-201ENST00000372736 HERVK_113Q902F9 699 aa25.88■■□□□ 1.73
COL9A2-201ENST00000372736 SH3GLB2Q9NR46 395 aa25.88■■□□□ 1.73
COL9A2-201ENST00000372736 TPCN1Q9ULQ1 816 aa25.88■■□□□ 1.73
COL9A2-201ENST00000372736 IQCF3P0C7M6 154 aa25.87■■□□□ 1.73
COL9A2-201ENST00000372736 SMIM10L2AP0DMW4 78 aa25.87■■□□□ 1.73
COL9A2-201ENST00000372736 SMIM10L2BP0DMW5 78 aa25.87■■□□□ 1.73
COL9A2-201ENST00000372736 SCRN1Q12765 414 aa25.87■■□□□ 1.73
COL9A2-201ENST00000372736 CCDC155Q8N6L0 562 aa25.87■■□□□ 1.73
COL9A2-201ENST00000372736 CXXC1Q9P0U4 656 aaPredicted RBP25.87■■□□□ 1.73
COL9A2-201ENST00000372736 TET1Q8NFU7 2136 aa25.87■■□□□ 1.73
COL9A2-201ENST00000372736 GSTTP1A0A1W2PQM5 241 aa25.86■■□□□ 1.73
COL9A2-201ENST00000372736 MEIS1O00470 390 aa25.86■■□□□ 1.73
COL9A2-201ENST00000372736 FGBP02675 491 aa25.86■■□□□ 1.73
COL9A2-201ENST00000372736 PFKMP08237 780 aa25.86■■□□□ 1.73
COL9A2-201ENST00000372736 CYP3A4P08684 503 aa25.86■■□□□ 1.73
COL9A2-201ENST00000372736 ARP10275 920 aa25.86■■□□□ 1.73
COL9A2-201ENST00000372736 RFC2P35250 354 aa25.86■■□□□ 1.73
COL9A2-201ENST00000372736 TCF7P36402 384 aaPredicted RBP25.86■■□□□ 1.73
COL9A2-201ENST00000372736 AK2P54819 239 aa25.86■■□□□ 1.73
COL9A2-201ENST00000372736 PTK7Q13308 1070 aa25.86■■□□□ 1.73
COL9A2-201ENST00000372736 TRIM71Q2Q1W2 868 aaKnown RBP25.86■■□□□ 1.73
COL9A2-201ENST00000372736 UTP14CQ5TAP6 766 aaKnown RBP25.86■■□□□ 1.73
COL9A2-201ENST00000372736 MCTP2Q6DN12 878 aa25.86■■□□□ 1.73
COL9A2-201ENST00000372736 RPUSD2Q8IZ73 545 aaKnown RBP25.86■■□□□ 1.73
COL9A2-201ENST00000372736 RETREG2Q8NC44 543 aa25.86■■□□□ 1.73
COL9A2-201ENST00000372736 RASGRP4Q8TDF6 673 aa25.86■■□□□ 1.73
COL9A2-201ENST00000372736 AFAP1L1Q8TED9 768 aa25.86■■□□□ 1.73
COL9A2-201ENST00000372736 WNT8BQ93098 351 aa25.86■■□□□ 1.73
COL9A2-201ENST00000372736 JPH1Q9HDC5 661 aaPredicted RBP25.86■■□□□ 1.73
COL9A2-201ENST00000372736 ZNF215Q9UL58 517 aaPredicted RBP25.86■■□□□ 1.73
COL9A2-201ENST00000372736 FAM86B1E9PN63 330 aa25.85■■□□□ 1.73
COL9A2-201ENST00000372736 PFKFB2O60825 505 aa25.85■■□□□ 1.73
COL9A2-201ENST00000372736 DEXIO95424 95 aa25.85■■□□□ 1.73
COL9A2-201ENST00000372736 FAM86B2P0C5J1 330 aa25.85■■□□□ 1.73
COL9A2-201ENST00000372736 ITGB3BPQ13352 177 aaPredicted RBP25.85■■□□□ 1.73
COL9A2-201ENST00000372736 NIPA1Q7RTP0 329 aa25.85■■□□□ 1.73
COL9A2-201ENST00000372736 OTOP2Q7RTS6 562 aa25.85■■□□□ 1.73
COL9A2-201ENST00000372736 DEFB128Q7Z7B8 93 aa25.85■■□□□ 1.73
COL9A2-201ENST00000372736 BICD2Q8TD16 824 aa25.85■■□□□ 1.73
COL9A2-201ENST00000372736 AGO4Q9HCK5 861 aaKnown RBP25.85■■□□□ 1.73
COL9A2-201ENST00000372736 MTMR10Q9NXD2 777 aa25.85■■□□□ 1.73
COL9A2-201ENST00000372736 NFASCO94856 1347 aa25.85■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms