RNA–Protein interactions for RNA: ENST00000372547.5

SNX21-205, Transcript of sorting nexin family member 21, humanhuman

TSL 1 (best)

Gene SNX21, Length 2,794 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-205ENST00000372547 ZHX3Q9H4I2 956 aa13.15□□□□□ -0.3
SNX21-205ENST00000372547 SLC24A3Q9HC58 644 aa13.15□□□□□ -0.3
SNX21-205ENST00000372547 TFCP2L1Q9NZI6 479 aa13.15□□□□□ -0.3
SNX21-205ENST00000372547 RNF14Q9UBS8 474 aa13.15□□□□□ -0.3
SNX21-205ENST00000372547 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.15□□□□□ -0.3
SNX21-205ENST00000372547 TLDC2A0PJX2 215 aa13.15□□□□□ -0.31
SNX21-205ENST00000372547 SMCO2A6NFE2 343 aa13.15□□□□□ -0.31
SNX21-205ENST00000372547 NEBLO76041 1014 aa13.15□□□□□ -0.31
SNX21-205ENST00000372547 FGFR1OPO95684 399 aaKnown RBP13.15□□□□□ -0.31
SNX21-205ENST00000372547 SERPING1P05155 500 aa13.15□□□□□ -0.31
SNX21-205ENST00000372547 PRDX5P30044 214 aa13.15□□□□□ -0.31
SNX21-205ENST00000372547 GBP2P32456 591 aaPredicted RBP13.15□□□□□ -0.31
SNX21-205ENST00000372547 SCTRP47872 440 aa13.15□□□□□ -0.31
SNX21-205ENST00000372547 MMP14P50281 582 aa13.15□□□□□ -0.31
SNX21-205ENST00000372547 PPP2R2AP63151 447 aa13.15□□□□□ -0.31
SNX21-205ENST00000372547 NAA25Q14CX7 972 aa13.15□□□□□ -0.31
SNX21-205ENST00000372547 MSL1Q68DK7 614 aa13.15□□□□□ -0.31
SNX21-205ENST00000372547 RPAINQ86UA6 219 aa13.15□□□□□ -0.31
SNX21-205ENST00000372547 GJA10Q969M2 543 aa13.15□□□□□ -0.31
SNX21-205ENST00000372547 MMTAG2Q9BU76 263 aaKnown RBP13.15□□□□□ -0.31
SNX21-205ENST00000372547 CELF4Q9BZC1 486 aaKnown RBP13.15□□□□□ -0.31
SNX21-205ENST00000372547 CUEDC2Q9H467 287 aa13.15□□□□□ -0.31
SNX21-205ENST00000372547 TMEM260Q9NX78 707 aa13.15□□□□□ -0.31
SNX21-205ENST00000372547 MYH3P11055 1940 aa13.14□□□□□ -0.31
SNX21-205ENST00000372547 STXBP3O00186 592 aa13.14□□□□□ -0.31
SNX21-205ENST00000372547 SART1O43290 800 aaKnown RBP13.14□□□□□ -0.31
SNX21-205ENST00000372547 TRAPPC3O43617 180 aa13.14□□□□□ -0.31
SNX21-205ENST00000372547 NONOQ15233 471 aaKnown RBP eCLIP13.14□□□□□ -0.31
SNX21-205ENST00000372547 SLC35G1Q2M3R5 365 aa13.14□□□□□ -0.31
SNX21-205ENST00000372547 GKAP1Q5VSY0 366 aaPredicted RBP13.14□□□□□ -0.31
SNX21-205ENST00000372547 HIBCHQ6NVY1 386 aaPredicted RBP13.14□□□□□ -0.31
SNX21-205ENST00000372547 ZNF34Q8IZ26 560 aa13.14□□□□□ -0.31
SNX21-205ENST00000372547 SLC44A5Q8NCS7 719 aa13.14□□□□□ -0.31
SNX21-205ENST00000372547 TBCKQ8TEA7 893 aa13.14□□□□□ -0.31
SNX21-205ENST00000372547 HVCN1Q96D96 273 aa13.14□□□□□ -0.31
SNX21-205ENST00000372547 PLCB1Q9NQ66 1216 aa13.14□□□□□ -0.31
SNX21-205ENST00000372547 A1CFQ9NQ94 594 aaKnown RBP13.14□□□□□ -0.31
SNX21-205ENST00000372547 IL17RBQ9NRM6 502 aa13.14□□□□□ -0.31
SNX21-205ENST00000372547 NIP7Q9Y221 180 aaKnown RBP eCLIP13.14□□□□□ -0.31
SNX21-205ENST00000372547 SSU72P8A0A1W2PR75 194 aa13.14□□□□□ -0.31
SNX21-205ENST00000372547 KRIT1O00522 736 aa13.14□□□□□ -0.31
SNX21-205ENST00000372547 SKAP2O75563 359 aaPredicted RBP13.14□□□□□ -0.31
SNX21-205ENST00000372547 ITGA4P13612 1032 aa13.14□□□□□ -0.31
SNX21-205ENST00000372547 PAX7P23759 505 aa13.14□□□□□ -0.31
SNX21-205ENST00000372547 KLRK1P26718 216 aa13.14□□□□□ -0.31
SNX21-205ENST00000372547 PPP2R5AQ15172 486 aa13.14□□□□□ -0.31
SNX21-205ENST00000372547 PNMA8AQ86V59 439 aaPredicted RBP13.14□□□□□ -0.31
SNX21-205ENST00000372547 TCP11Q8WWU5 503 aa13.14□□□□□ -0.31
SNX21-205ENST00000372547 LARP4BQ92615 738 aaKnown RBP13.14□□□□□ -0.31
SNX21-205ENST00000372547 LRRC45Q96CN5 670 aa13.14□□□□□ -0.31
SNX21-205ENST00000372547 IQCDQ96DY2 449 aa13.14□□□□□ -0.31
SNX21-205ENST00000372547 SGSM3Q96HU1 749 aa13.14□□□□□ -0.31
SNX21-205ENST00000372547 SELENOSQ9BQE4 189 aa13.14□□□□□ -0.31
SNX21-205ENST00000372547 ISCUQ9H1K1 167 aa13.14□□□□□ -0.31
SNX21-205ENST00000372547 ACTR5Q9H9F9 607 aaPredicted RBP13.14□□□□□ -0.31
SNX21-205ENST00000372547 MAD2L2Q9UI95 211 aa13.14□□□□□ -0.31
SNX21-205ENST00000372547 ATP8A1Q9Y2Q0 1164 aa13.14□□□□□ -0.31
SNX21-205ENST00000372547 ATP6V0A2Q9Y487 856 aa13.14□□□□□ -0.31
SNX21-205ENST00000372547 BCORQ6W2J9 1755 aa13.14□□□□□ -0.31
SNX21-205ENST00000372547 UBR2Q8IWV8 1755 aa13.14□□□□□ -0.31
SNX21-205ENST00000372547 TNS2Q63HR2 1409 aa13.13□□□□□ -0.31
SNX21-205ENST00000372547 TSPY3P0CV98 308 aa13.13□□□□□ -0.31
SNX21-205ENST00000372547 TSPY8P0CW00 308 aa13.13□□□□□ -0.31
SNX21-205ENST00000372547 DHX9Q08211 1270 aaKnown RBP13.13□□□□□ -0.31
SNX21-205ENST00000372547 PRPF4BQ13523 1007 aaKnown RBP13.13□□□□□ -0.31
SNX21-205ENST00000372547 RUFY4Q6ZNE9 571 aa13.13□□□□□ -0.31
SNX21-205ENST00000372547 DDX12PQ92771 950 aa13.13□□□□□ -0.31
SNX21-205ENST00000372547 AK8Q96MA6 479 aa13.13□□□□□ -0.31
SNX21-205ENST00000372547 PAGR1Q9BTK6 254 aa13.13□□□□□ -0.31
SNX21-205ENST00000372547 BARHL2Q9NY43 387 aa13.13□□□□□ -0.31
SNX21-205ENST00000372547 M0R2N6 131 aa13.13□□□□□ -0.31
SNX21-205ENST00000372547 ORC4O43929 436 aa13.13□□□□□ -0.31
SNX21-205ENST00000372547 NOL4O94818 638 aa13.13□□□□□ -0.31
SNX21-205ENST00000372547 CLTAP09496 248 aa13.13□□□□□ -0.31
SNX21-205ENST00000372547 ACTN1P12814 892 aa13.13□□□□□ -0.31
SNX21-205ENST00000372547 PPP1R2P41236 205 aa13.13□□□□□ -0.31
SNX21-205ENST00000372547 GRB10Q13322 594 aa13.13□□□□□ -0.31
SNX21-205ENST00000372547 PLCB4Q15147 1175 aa13.13□□□□□ -0.31
SNX21-205ENST00000372547 ASIC2Q16515 512 aa13.13□□□□□ -0.31
SNX21-205ENST00000372547 SLC18A3Q16572 532 aa13.13□□□□□ -0.31
SNX21-205ENST00000372547 NEK8Q86SG6 692 aa13.13□□□□□ -0.31
SNX21-205ENST00000372547 UHMK1Q8TAS1 419 aaKnown RBP13.13□□□□□ -0.31
SNX21-205ENST00000372547 ANKS1AQ92625 1134 aa13.13□□□□□ -0.31
SNX21-205ENST00000372547 MIEF2Q96C03 454 aa13.13□□□□□ -0.31
SNX21-205ENST00000372547 NUDT12Q9BQG2 462 aa13.13□□□□□ -0.31
SNX21-205ENST00000372547 CARD10Q9BWT7 1032 aa13.13□□□□□ -0.31
SNX21-205ENST00000372547 SH3GLB2Q9NR46 395 aa13.13□□□□□ -0.31
SNX21-205ENST00000372547 BLOC1S4Q9NUP1 217 aa13.13□□□□□ -0.31
SNX21-205ENST00000372547 CEP72Q9P209 647 aa13.13□□□□□ -0.31
SNX21-205ENST00000372547 SLC12A6Q9UHW9 1150 aa13.13□□□□□ -0.31
SNX21-205ENST00000372547 GGT7Q9UJ14 662 aa13.13□□□□□ -0.31
SNX21-205ENST00000372547 COL5A2P05997 1499 aaPredicted RBP13.13□□□□□ -0.31
SNX21-205ENST00000372547 KLRF2D3W0D1 207 aa13.12□□□□□ -0.31
SNX21-205ENST00000372547 LAD1O00515 517 aa13.12□□□□□ -0.31
SNX21-205ENST00000372547 TTI1O43156 1089 aa13.12□□□□□ -0.31
SNX21-205ENST00000372547 KIF1CO43896 1103 aaKnown RBP13.12□□□□□ -0.31
SNX21-205ENST00000372547 MARCH6O60337 910 aa13.12□□□□□ -0.31
SNX21-205ENST00000372547 CTNND1O60716 968 aaKnown RBP13.12□□□□□ -0.31
SNX21-205ENST00000372547 ECHS1P30084 290 aa13.12□□□□□ -0.31
SNX21-205ENST00000372547 SOGA3Q5TF21 947 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms