RNA–Protein interactions for RNA: ENST00000372390.8

TSC22D3-205, Transcript of TSC22 domain family member 3, humanhuman

TSL 1 (best) BASIC

Gene TSC22D3, Length 1,812 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D3-205ENST00000372390 FBXO16Q8IX29 292 aaPredicted RBP23.35■■□□□ 1.33
TSC22D3-205ENST00000372390 IGSF22Q8N9C0 903 aa23.35■■□□□ 1.33
TSC22D3-205ENST00000372390 TRIB2Q92519 343 aa23.35■■□□□ 1.33
TSC22D3-205ENST00000372390 BCAS3Q9H6U6 928 aa23.35■■□□□ 1.33
TSC22D3-205ENST00000372390 PRDM10Q9NQV6 1147 aa23.35■■□□□ 1.33
TSC22D3-205ENST00000372390 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.35■■□□□ 1.33
TSC22D3-205ENST00000372390 FLRT1Q9NZU1 646 aa23.35■■□□□ 1.33
TSC22D3-205ENST00000372390 VAV3Q9UKW4 847 aa23.35■■□□□ 1.33
TSC22D3-205ENST00000372390 PTPN22Q9Y2R2 807 aa23.35■■□□□ 1.33
TSC22D3-205ENST00000372390 TRAK2O60296 914 aa23.34■■□□□ 1.33
TSC22D3-205ENST00000372390 LRCH2Q5VUJ6 765 aa23.34■■□□□ 1.33
TSC22D3-205ENST00000372390 PTCH2Q9Y6C5 1203 aa23.34■■□□□ 1.33
TSC22D3-205ENST00000372390 DDX39AO00148 427 aaKnown RBP23.33■■□□□ 1.33
TSC22D3-205ENST00000372390 DHX15O43143 795 aaKnown RBP23.33■■□□□ 1.33
TSC22D3-205ENST00000372390 NR1I2O75469 434 aa23.33■■□□□ 1.33
TSC22D3-205ENST00000372390 HMGCRP04035 888 aa23.33■■□□□ 1.33
TSC22D3-205ENST00000372390 PTMSP20962 102 aa23.33■■□□□ 1.33
TSC22D3-205ENST00000372390 TMEM266Q2M3C6 531 aa23.33■■□□□ 1.33
TSC22D3-205ENST00000372390 PANK2Q9BZ23 570 aa23.33■■□□□ 1.33
TSC22D3-205ENST00000372390 A0A087X0B3 334 aa23.33■■□□□ 1.32
TSC22D3-205ENST00000372390 SPATA31C2B4DYI2 1134 aa23.33■■□□□ 1.32
TSC22D3-205ENST00000372390 SNAI1O95863 264 aaPredicted RBP23.33■■□□□ 1.32
TSC22D3-205ENST00000372390 ELNP15502 786 aa23.33■■□□□ 1.32
TSC22D3-205ENST00000372390 GNPTABQ3T906 1256 aa23.33■■□□□ 1.32
TSC22D3-205ENST00000372390 VTA1Q9NP79 307 aa23.33■■□□□ 1.32
TSC22D3-205ENST00000372390 HPSEQ9Y251 543 aa23.33■■□□□ 1.32
TSC22D3-205ENST00000372390 SORBS3O60504 671 aa23.32■■□□□ 1.32
TSC22D3-205ENST00000372390 GAS7O60861 476 aa23.32■■□□□ 1.32
TSC22D3-205ENST00000372390 SP2Q02086 613 aa23.32■■□□□ 1.32
TSC22D3-205ENST00000372390 PKN2Q16513 984 aaKnown RBP23.32■■□□□ 1.32
TSC22D3-205ENST00000372390 ENGASEQ8NFI3 743 aa23.32■■□□□ 1.32
TSC22D3-205ENST00000372390 MMTAG2Q9BU76 263 aaKnown RBP23.32■■□□□ 1.32
TSC22D3-205ENST00000372390 ABHD16BQ9H3Z7 469 aa23.32■■□□□ 1.32
TSC22D3-205ENST00000372390 PDGFCQ9NRA1 345 aa23.32■■□□□ 1.32
TSC22D3-205ENST00000372390 LRWD1Q9UFC0 647 aa23.32■■□□□ 1.32
TSC22D3-205ENST00000372390 EML1O00423 815 aa23.31■■□□□ 1.32
TSC22D3-205ENST00000372390 CHMP2AO43633 222 aa23.31■■□□□ 1.32
TSC22D3-205ENST00000372390 MBD3O95983 291 aa23.31■■□□□ 1.32
TSC22D3-205ENST00000372390 KCNA2P16389 499 aa23.31■■□□□ 1.32
TSC22D3-205ENST00000372390 GRK4P32298 578 aa23.31■■□□□ 1.32
TSC22D3-205ENST00000372390 ICAM3P32942 547 aa23.31■■□□□ 1.32
TSC22D3-205ENST00000372390 CYP2C19P33261 490 aa23.31■■□□□ 1.32
TSC22D3-205ENST00000372390 SNW1Q13573 536 aaKnown RBP23.31■■□□□ 1.32
TSC22D3-205ENST00000372390 TMEM63BQ5T3F8 832 aa23.31■■□□□ 1.32
TSC22D3-205ENST00000372390 NCAPH2Q6IBW4 605 aa23.31■■□□□ 1.32
TSC22D3-205ENST00000372390 CCDC73Q6ZRK6 1079 aa23.31■■□□□ 1.32
TSC22D3-205ENST00000372390 KATNBL1Q9H079 304 aa23.31■■□□□ 1.32
TSC22D3-205ENST00000372390 UNC45AQ9H3U1 944 aa23.31■■□□□ 1.32
TSC22D3-205ENST00000372390 NRBP1Q9UHY1 535 aa23.31■■□□□ 1.32
TSC22D3-205ENST00000372390 TELO2Q9Y4R8 837 aa23.31■■□□□ 1.32
TSC22D3-205ENST00000372390 HTTP42858 3142 aa23.31■■□□□ 1.32
TSC22D3-205ENST00000372390 FAM237AA0A1B0GTK4 181 aa23.31■■□□□ 1.32
TSC22D3-205ENST00000372390 ARIH2O95376 493 aa23.31■■□□□ 1.32
TSC22D3-205ENST00000372390 IGHA2P01877 340 aa23.31■■□□□ 1.32
TSC22D3-205ENST00000372390 PDIA5Q14554 519 aa23.31■■□□□ 1.32
TSC22D3-205ENST00000372390 FMR1NBQ8N0W7 255 aaPredicted RBP23.31■■□□□ 1.32
TSC22D3-205ENST00000372390 PDILTQ8N807 584 aa23.31■■□□□ 1.32
TSC22D3-205ENST00000372390 RIT2Q99578 217 aa23.31■■□□□ 1.32
TSC22D3-205ENST00000372390 TEKT3Q9BXF9 490 aa23.31■■□□□ 1.32
TSC22D3-205ENST00000372390 DACT1Q9NYF0 836 aa23.31■■□□□ 1.32
TSC22D3-205ENST00000372390 ZHX1Q9UKY1 873 aaPredicted RBP23.31■■□□□ 1.32
TSC22D3-205ENST00000372390 FAM160A1Q05DH4 1040 aa23.3■■□□□ 1.32
TSC22D3-205ENST00000372390 KLHL40Q2TBA0 621 aa23.3■■□□□ 1.32
TSC22D3-205ENST00000372390 AK8Q96MA6 479 aa23.3■■□□□ 1.32
TSC22D3-205ENST00000372390 FAM13BQ9NYF5 915 aa23.3■■□□□ 1.32
TSC22D3-205ENST00000372390 KCNH3Q9ULD8 1083 aa23.3■■□□□ 1.32
TSC22D3-205ENST00000372390 PTGS1P23219 599 aa23.29■■□□□ 1.32
TSC22D3-205ENST00000372390 KARSQ15046 597 aaKnown RBP23.29■■□□□ 1.32
TSC22D3-205ENST00000372390 FBXO46Q6PJ61 603 aaPredicted RBP23.29■■□□□ 1.32
TSC22D3-205ENST00000372390 B3GNT9Q6UX72 402 aa23.29■■□□□ 1.32
TSC22D3-205ENST00000372390 CDHR1Q96JP9 859 aa23.29■■□□□ 1.32
TSC22D3-205ENST00000372390 PLIN2Q99541 437 aa23.29■■□□□ 1.32
TSC22D3-205ENST00000372390 MAFGO15525 162 aa23.29■■□□□ 1.32
TSC22D3-205ENST00000372390 PPP2R5CQ13362 524 aa23.29■■□□□ 1.32
TSC22D3-205ENST00000372390 ACVR2BQ13705 512 aa23.29■■□□□ 1.32
TSC22D3-205ENST00000372390 ZRSR1Q15695 479 aaKnown RBP23.29■■□□□ 1.32
TSC22D3-205ENST00000372390 LY6KQ17RY6 165 aa23.29■■□□□ 1.32
TSC22D3-205ENST00000372390 SLC9C1Q4G0N8 1177 aa23.29■■□□□ 1.32
TSC22D3-205ENST00000372390 PRAMEF19Q5SWL8 479 aa23.29■■□□□ 1.32
TSC22D3-205ENST00000372390 TAPT1Q6NXT6 567 aa23.29■■□□□ 1.32
TSC22D3-205ENST00000372390 CABP7Q86V35 215 aa23.29■■□□□ 1.32
TSC22D3-205ENST00000372390 CCNE2O96020 404 aa23.28■■□□□ 1.32
TSC22D3-205ENST00000372390 PRKAR2AP13861 404 aaKnown RBP23.28■■□□□ 1.32
TSC22D3-205ENST00000372390 UBA1P22314 1058 aaKnown RBP23.28■■□□□ 1.32
TSC22D3-205ENST00000372390 UBA7P41226 1012 aa23.28■■□□□ 1.32
TSC22D3-205ENST00000372390 SYKP43405 635 aa23.28■■□□□ 1.32
TSC22D3-205ENST00000372390 CAVIN1Q6NZI2 390 aaKnown RBP23.28■■□□□ 1.32
TSC22D3-205ENST00000372390 LRRC15Q8TF66 581 aa23.28■■□□□ 1.32
TSC22D3-205ENST00000372390 SCFD2Q8WU76 684 aa23.28■■□□□ 1.32
TSC22D3-205ENST00000372390 RAB34Q9BZG1 259 aa23.28■■□□□ 1.32
TSC22D3-205ENST00000372390 TBC1D22BQ9NU19 505 aa23.28■■□□□ 1.32
TSC22D3-205ENST00000372390 TMEM63CQ9P1W3 806 aa23.28■■□□□ 1.32
TSC22D3-205ENST00000372390 POLR2DO15514 142 aaKnown RBP23.27■■□□□ 1.32
TSC22D3-205ENST00000372390 ZNF202O95125 648 aa23.27■■□□□ 1.32
TSC22D3-205ENST00000372390 INHAP05111 366 aa23.27■■□□□ 1.32
TSC22D3-205ENST00000372390 ECM1Q16610 540 aa23.27■■□□□ 1.32
TSC22D3-205ENST00000372390 SKOR2Q2VWA4 1001 aaPredicted RBP23.27■■□□□ 1.32
TSC22D3-205ENST00000372390 KCNV1Q6PIU1 500 aa23.27■■□□□ 1.32
TSC22D3-205ENST00000372390 SNX29Q8TEQ0 813 aa23.27■■□□□ 1.32
TSC22D3-205ENST00000372390 CCSER1Q9C0I3 900 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms