RNA–Protein interactions for RNA: ENST00000372330.3

MMP9-201, Transcript of matrix metallopeptidase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MMP9, Length 2,336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP9-201ENST00000372330 PDXDC2PQ6P474 469 aa20.08■□□□□ 0.81
MMP9-201ENST00000372330 KRT26Q7Z3Y9 468 aa20.08■□□□□ 0.81
MMP9-201ENST00000372330 TBC1D1Q86TI0 1168 aaPredicted RBP20.08■□□□□ 0.81
MMP9-201ENST00000372330 C8orf37Q96NL8 207 aa20.08■□□□□ 0.81
MMP9-201ENST00000372330 TUBGCP2Q9BSJ2 902 aa20.08■□□□□ 0.81
MMP9-201ENST00000372330 LRP2BPQ9P2M1 347 aa20.08■□□□□ 0.81
MMP9-201ENST00000372330 RASSF10A6NK89 507 aa20.08■□□□□ 0.8
MMP9-201ENST00000372330 B4DLN1 442 aa20.08■□□□□ 0.8
MMP9-201ENST00000372330 KIF11P52732 1056 aa20.08■□□□□ 0.8
MMP9-201ENST00000372330 KLHDC7AQ5VTJ3 777 aa20.08■□□□□ 0.8
MMP9-201ENST00000372330 PIGWQ7Z7B1 504 aa20.08■□□□□ 0.8
MMP9-201ENST00000372330 KRT12Q99456 494 aa20.08■□□□□ 0.8
MMP9-201ENST00000372330 WTIPA6NIX2 430 aaPredicted RBP20.07■□□□□ 0.8
MMP9-201ENST00000372330 MYBP10242 640 aa20.07■□□□□ 0.8
MMP9-201ENST00000372330 XBP1P17861 261 aa20.07■□□□□ 0.8
MMP9-201ENST00000372330 ATP4AP20648 1035 aa20.07■□□□□ 0.8
MMP9-201ENST00000372330 KIF5BP33176 963 aa20.07■□□□□ 0.8
MMP9-201ENST00000372330 STAMQ92783 540 aa20.07■□□□□ 0.8
MMP9-201ENST00000372330 XPO6Q96QU8 1125 aaKnown RBP20.07■□□□□ 0.8
MMP9-201ENST00000372330 ERGIC2Q96RQ1 377 aa20.07■□□□□ 0.8
MMP9-201ENST00000372330 MTA3Q9BTC8 594 aa20.07■□□□□ 0.8
MMP9-201ENST00000372330 CNOT8Q9UFF9 292 aaKnown RBP20.07■□□□□ 0.8
MMP9-201ENST00000372330 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.07■□□□□ 0.8
MMP9-201ENST00000372330 RREB1Q92766 1687 aa20.07■□□□□ 0.8
MMP9-201ENST00000372330 CHD4Q14839 1912 aa20.07■□□□□ 0.8
MMP9-201ENST00000372330 NQO1P15559 274 aaKnown RBP20.07■□□□□ 0.8
MMP9-201ENST00000372330 RRP12Q5JTH9 1297 aaKnown RBP20.07■□□□□ 0.8
MMP9-201ENST00000372330 CRACR2BQ8N4Y2 399 aaPredicted RBP20.07■□□□□ 0.8
MMP9-201ENST00000372330 FAM129AQ9BZQ8 928 aa20.07■□□□□ 0.8
MMP9-201ENST00000372330 NOVA2Q9UNW9 492 aaKnown RBP20.07■□□□□ 0.8
MMP9-201ENST00000372330 PSMA7O14818 248 aa20.06■□□□□ 0.8
MMP9-201ENST00000372330 MAGEA1P43355 309 aa20.06■□□□□ 0.8
MMP9-201ENST00000372330 HLTFQ14527 1009 aaKnown RBP eCLIP20.06■□□□□ 0.8
MMP9-201ENST00000372330 WTAPQ15007 396 aa20.06■□□□□ 0.8
MMP9-201ENST00000372330 TBC1D25Q3MII6 688 aa20.06■□□□□ 0.8
MMP9-201ENST00000372330 FAM114A1Q8IWE2 563 aa20.06■□□□□ 0.8
MMP9-201ENST00000372330 MIGA1Q8NAN2 632 aa20.06■□□□□ 0.8
MMP9-201ENST00000372330 NGLY1Q96IV0 654 aa20.06■□□□□ 0.8
MMP9-201ENST00000372330 MS4A14Q96JA4 679 aa20.06■□□□□ 0.8
MMP9-201ENST00000372330 PCMTD1Q96MG8 357 aaPredicted RBP20.06■□□□□ 0.8
MMP9-201ENST00000372330 NCK2O43639 380 aa20.05■□□□□ 0.8
MMP9-201ENST00000372330 AKR1B10O60218 316 aa20.05■□□□□ 0.8
MMP9-201ENST00000372330 RTN1Q16799 776 aa20.05■□□□□ 0.8
MMP9-201ENST00000372330 TRPM8Q7Z2W7 1104 aa20.05■□□□□ 0.8
MMP9-201ENST00000372330 OXER1Q8TDS5 423 aa20.05■□□□□ 0.8
MMP9-201ENST00000372330 ARHGAP20Q9P2F6 1191 aa20.05■□□□□ 0.8
MMP9-201ENST00000372330 ANKIB1Q9P2G1 1089 aa20.05■□□□□ 0.8
MMP9-201ENST00000372330 ZNF131P52739 623 aa20.05■□□□□ 0.8
MMP9-201ENST00000372330 RCAN1P53805 252 aa20.05■□□□□ 0.8
MMP9-201ENST00000372330 TMTC2Q8N394 836 aa20.05■□□□□ 0.8
MMP9-201ENST00000372330 GALNT15Q8N3T1 639 aa20.05■□□□□ 0.8
MMP9-201ENST00000372330 TRIM47Q96LD4 638 aa20.05■□□□□ 0.8
MMP9-201ENST00000372330 ZNF317Q96PQ6 595 aaPredicted RBP20.05■□□□□ 0.8
MMP9-201ENST00000372330 ZKSCAN3Q9BRR0 538 aa20.05■□□□□ 0.8
MMP9-201ENST00000372330 UBAC1Q9BSL1 405 aa20.05■□□□□ 0.8
MMP9-201ENST00000372330 RNF41Q9H4P4 317 aaPredicted RBP20.05■□□□□ 0.8
MMP9-201ENST00000372330 RGL1Q9NZL6 768 aa20.05■□□□□ 0.8
MMP9-201ENST00000372330 MAGOHP61326 146 aaKnown RBP20.04■□□□□ 0.8
MMP9-201ENST00000372330 UAP1Q16222 522 aaPredicted RBP20.04■□□□□ 0.8
MMP9-201ENST00000372330 ANKRD20A2Q5SQ80 823 aa20.04■□□□□ 0.8
MMP9-201ENST00000372330 ANKRD20A1Q5TYW2 823 aa20.04■□□□□ 0.8
MMP9-201ENST00000372330 ANKRD20A3Q5VUR7 823 aa20.04■□□□□ 0.8
MMP9-201ENST00000372330 TYW1BQ6NUM6 668 aa20.04■□□□□ 0.8
MMP9-201ENST00000372330 MTHFD1LQ6UB35 978 aa20.04■□□□□ 0.8
MMP9-201ENST00000372330 KLHL23Q8NBE8 558 aa20.04■□□□□ 0.8
MMP9-201ENST00000372330 MAGOHBQ96A72 148 aaKnown RBP20.04■□□□□ 0.8
MMP9-201ENST00000372330 SAMD15Q9P1V8 674 aa20.04■□□□□ 0.8
MMP9-201ENST00000372330 ZNF652Q9Y2D9 606 aa20.04■□□□□ 0.8
MMP9-201ENST00000372330 GDAQ9Y2T3 454 aa20.04■□□□□ 0.8
MMP9-201ENST00000372330 BCORQ6W2J9 1755 aa20.04■□□□□ 0.8
MMP9-201ENST00000372330 AFF2P51816 1311 aa20.04■□□□□ 0.8
MMP9-201ENST00000372330 LAMB2P55268 1798 aa20.04■□□□□ 0.8
MMP9-201ENST00000372330 SMIM24O75264 130 aa20.04■□□□□ 0.8
MMP9-201ENST00000372330 ATP2A2P16615 1042 aaKnown RBP20.04■□□□□ 0.8
MMP9-201ENST00000372330 LMNB2Q03252 620 aa20.04■□□□□ 0.8
MMP9-201ENST00000372330 PSMD2Q13200 908 aa20.04■□□□□ 0.8
MMP9-201ENST00000372330 C3orf67Q6ZVT6 689 aa20.04■□□□□ 0.8
MMP9-201ENST00000372330 SMIM5Q71RC9 77 aa20.04■□□□□ 0.8
MMP9-201ENST00000372330 ZSCAN29Q8IWY8 852 aaPredicted RBP20.04■□□□□ 0.8
MMP9-201ENST00000372330 GBP7Q8N8V2 638 aaPredicted RBP20.04■□□□□ 0.8
MMP9-201ENST00000372330 MTRQ99707 1265 aa20.04■□□□□ 0.8
MMP9-201ENST00000372330 PLCD4Q9BRC7 762 aa20.04■□□□□ 0.8
MMP9-201ENST00000372330 MAPK8IP1Q9UQF2 711 aa20.04■□□□□ 0.8
MMP9-201ENST00000372330 ZNF804BA4D1E1 1349 aa20.04■□□□□ 0.8
MMP9-201ENST00000372330 CICQ96RK0 1608 aaPredicted RBP20.03■□□□□ 0.8
MMP9-201ENST00000372330 TRIM49BA6NDI0 452 aa20.03■□□□□ 0.8
MMP9-201ENST00000372330 RAD51CO43502 376 aa20.03■□□□□ 0.8
MMP9-201ENST00000372330 CTNND1O60716 968 aaKnown RBP20.03■□□□□ 0.8
MMP9-201ENST00000372330 CYP7A1P22680 504 aa20.03■□□□□ 0.8
MMP9-201ENST00000372330 CNGA1P29973 690 aa20.03■□□□□ 0.8
MMP9-201ENST00000372330 CTCFP49711 727 aaPredicted RBP20.03■□□□□ 0.8
MMP9-201ENST00000372330 EIF3BP55884 814 aaKnown RBP20.03■□□□□ 0.8
MMP9-201ENST00000372330 TAF1P21675 1872 aa20.03■□□□□ 0.8
MMP9-201ENST00000372330 LRRD1A4D1F6 860 aa20.03■□□□□ 0.8
MMP9-201ENST00000372330 CES2O00748 559 aa20.03■□□□□ 0.8
MMP9-201ENST00000372330 BACH1O14867 736 aa20.03■□□□□ 0.8
MMP9-201ENST00000372330 EIF4A3P38919 411 aaKnown RBP20.03■□□□□ 0.8
MMP9-201ENST00000372330 KCNQ4P56696 695 aa20.03■□□□□ 0.8
MMP9-201ENST00000372330 LAMB3Q13751 1172 aa20.03■□□□□ 0.8
MMP9-201ENST00000372330 ADGRA1Q86SQ6 560 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms