RNA–Protein interactions for RNA: ENST00000372067.7

VEGFA-205, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 3,535 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-205ENST00000372067 LMAN1P49257 510 aa18.87■□□□□ 0.61
VEGFA-205ENST00000372067 FXR2P51116 673 aaKnown RBP eCLIP18.87■□□□□ 0.616e-18■■■□□ 18.2
VEGFA-205ENST00000372067 HAUS3Q68CZ6 603 aa18.87■□□□□ 0.61
VEGFA-205ENST00000372067 SH3BP5LQ7L8J4 393 aa18.87■□□□□ 0.61
VEGFA-205ENST00000372067 TTLL6Q8N841 843 aa18.87■□□□□ 0.61
VEGFA-205ENST00000372067 MTMR9Q96QG7 549 aa18.87■□□□□ 0.61
VEGFA-205ENST00000372067 DNM3Q9UQ16 869 aa18.87■□□□□ 0.61
VEGFA-205ENST00000372067 CASZ1Q86V15 1759 aa18.87■□□□□ 0.61
VEGFA-205ENST00000372067 SLC15A2Q16348 729 aa18.87■□□□□ 0.61
VEGFA-205ENST00000372067 ACER1Q8TDN7 264 aa18.87■□□□□ 0.61
VEGFA-205ENST00000372067 JAKMIP2Q96AA8 810 aa18.87■□□□□ 0.61
VEGFA-205ENST00000372067 CCDC43Q96MW1 224 aaKnown RBP18.87■□□□□ 0.61
VEGFA-205ENST00000372067 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.87■□□□□ 0.61
VEGFA-205ENST00000372067 ADAM21Q9UKJ8 722 aa18.87■□□□□ 0.61
VEGFA-205ENST00000372067 MAP2K2P36507 400 aa18.87■□□□□ 0.61
VEGFA-205ENST00000372067 CHMP4BP1P59074 171 aa18.87■□□□□ 0.61
VEGFA-205ENST00000372067 COASYQ13057 564 aa18.87■□□□□ 0.61
VEGFA-205ENST00000372067 PPP2R5AQ15172 486 aa18.87■□□□□ 0.61
VEGFA-205ENST00000372067 L2HGDHQ9H9P8 463 aa18.87■□□□□ 0.61
VEGFA-205ENST00000372067 JADE2Q9NQC1 790 aa18.87■□□□□ 0.61
VEGFA-205ENST00000372067 HOMER2Q9NSB8 354 aa18.87■□□□□ 0.61
VEGFA-205ENST00000372067 NAV1Q8NEY1 1877 aa18.86■□□□□ 0.61
VEGFA-205ENST00000372067 KDM3AQ9Y4C1 1321 aa18.86■□□□□ 0.61
VEGFA-205ENST00000372067 IGKV6D-41A0A0C4DH26 115 aa18.86■□□□□ 0.61
VEGFA-205ENST00000372067 TBC1D8O95759 1140 aa18.86■□□□□ 0.61
VEGFA-205ENST00000372067 KRT83P78385 493 aa18.86■□□□□ 0.61
VEGFA-205ENST00000372067 TPH2Q8IWU9 490 aa18.86■□□□□ 0.61
VEGFA-205ENST00000372067 SEMA6BQ9H3T3 888 aa18.86■□□□□ 0.61
VEGFA-205ENST00000372067 KCND1Q9NSA2 647 aa18.86■□□□□ 0.61
VEGFA-205ENST00000372067 SERPINA10Q9UK55 444 aa18.86■□□□□ 0.61
VEGFA-205ENST00000372067 THSD7AQ9UPZ6 1657 aa18.86■□□□□ 0.61
VEGFA-205ENST00000372067 SNHG28P0DPA3 235 aa18.86■□□□□ 0.61
VEGFA-205ENST00000372067 PDIA5Q14554 519 aa18.86■□□□□ 0.61
VEGFA-205ENST00000372067 PLS1Q14651 629 aa18.86■□□□□ 0.61
VEGFA-205ENST00000372067 MAP9Q49MG5 647 aa18.86■□□□□ 0.61
VEGFA-205ENST00000372067 NIM1KQ8IY84 436 aa18.86■□□□□ 0.61
VEGFA-205ENST00000372067 NUP58Q9BVL2 599 aa18.86■□□□□ 0.61
VEGFA-205ENST00000372067 COL24A1Q17RW2 1714 aa18.86■□□□□ 0.61
VEGFA-205ENST00000372067 ACTN2P35609 894 aa18.86■□□□□ 0.61
VEGFA-205ENST00000372067 STAT2P52630 851 aa18.86■□□□□ 0.61
VEGFA-205ENST00000372067 EHD4Q9H223 541 aa18.86■□□□□ 0.61
VEGFA-205ENST00000372067 NDST4Q9H3R1 872 aa18.86■□□□□ 0.61
VEGFA-205ENST00000372067 FAM170AA1A519 330 aa18.85■□□□□ 0.61
VEGFA-205ENST00000372067 CCDC93Q567U6 631 aa18.85■□□□□ 0.61
VEGFA-205ENST00000372067 PDGFDQ9GZP0 370 aaPredicted RBP18.85■□□□□ 0.61
VEGFA-205ENST00000372067 ZBTB21Q9ULJ3 1066 aa18.85■□□□□ 0.61
VEGFA-205ENST00000372067 ITIH6Q6UXX5 1313 aa18.85■□□□□ 0.61
VEGFA-205ENST00000372067 MYH1P12882 1939 aa18.85■□□□□ 0.61
VEGFA-205ENST00000372067 PSMD14O00487 310 aa18.85■□□□□ 0.61
VEGFA-205ENST00000372067 KRT86O43790 486 aa18.85■□□□□ 0.61
VEGFA-205ENST00000372067 ABL1P00519 1130 aa18.85■□□□□ 0.61
VEGFA-205ENST00000372067 SCP2P22307 547 aa18.85■□□□□ 0.61
VEGFA-205ENST00000372067 PBX1P40424 430 aa18.85■□□□□ 0.61
VEGFA-205ENST00000372067 KIF5AQ12840 1032 aa18.85■□□□□ 0.61
VEGFA-205ENST00000372067 MAEAQ7L5Y9 396 aa18.85■□□□□ 0.61
VEGFA-205ENST00000372067 HAS1Q92839 578 aa18.85■□□□□ 0.61
VEGFA-205ENST00000372067 SAMM50Q9Y512 469 aa18.85■□□□□ 0.61
VEGFA-205ENST00000372067 DCAF17Q5H9S7 520 aaPredicted RBP18.84■□□□□ 0.61
VEGFA-205ENST00000372067 SLFN12Q8IYM2 578 aa18.84■□□□□ 0.61
VEGFA-205ENST00000372067 ANKRD13CQ8N6S4 541 aa18.84■□□□□ 0.61
VEGFA-205ENST00000372067 PVALEFA0A1B0GWK0 134 aa18.84■□□□□ 0.61
VEGFA-205ENST00000372067 CTAGE15A4D2H0 777 aa18.84■□□□□ 0.61
VEGFA-205ENST00000372067 SFI1A8K8P3 1242 aa18.84■□□□□ 0.61
VEGFA-205ENST00000372067 EFCAB8A8MWE9 144 aa18.84■□□□□ 0.61
VEGFA-205ENST00000372067 TFRCP02786 760 aaKnown RBP18.84■□□□□ 0.61
VEGFA-205ENST00000372067 CTAGE8P0CG41 777 aa18.84■□□□□ 0.61
VEGFA-205ENST00000372067 ORC2Q13416 577 aaPredicted RBP18.84■□□□□ 0.61
VEGFA-205ENST00000372067 ECM1Q16610 540 aa18.84■□□□□ 0.61
VEGFA-205ENST00000372067 PPP4R3AQ6IN85 833 aa18.84■□□□□ 0.61
VEGFA-205ENST00000372067 CTAGE6Q86UF2 777 aa18.84■□□□□ 0.61
VEGFA-205ENST00000372067 CTAGE4Q8IX94 777 aa18.84■□□□□ 0.61
VEGFA-205ENST00000372067 TMEM39BQ9GZU3 492 aa18.84■□□□□ 0.61
VEGFA-205ENST00000372067 GOPCQ9HD26 462 aa18.84■□□□□ 0.61
VEGFA-205ENST00000372067 CCDC155Q8N6L0 562 aa18.84■□□□□ 0.61
VEGFA-205ENST00000372067 PSMB7Q99436 277 aa18.84■□□□□ 0.61
VEGFA-205ENST00000372067 PRR12Q9ULL5 1215 aa18.84■□□□□ 0.61
VEGFA-205ENST00000372067 KIAA1551Q9HCM1 1747 aa18.84■□□□□ 0.61
VEGFA-205ENST00000372067 LRRC10BA6NIK2 292 aa18.83■□□□□ 0.61
VEGFA-205ENST00000372067 USO1O60763 962 aaKnown RBP18.83■□□□□ 0.61
VEGFA-205ENST00000372067 SMC1AQ14683 1233 aaKnown RBP18.83■□□□□ 0.61
VEGFA-205ENST00000372067 VWA3BQ502W6 1294 aa18.83■□□□□ 0.61
VEGFA-205ENST00000372067 DEFB132Q7Z7B7 95 aa18.83■□□□□ 0.61
VEGFA-205ENST00000372067 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.83■□□□□ 0.611e-11■□□□□ 9.4
VEGFA-205ENST00000372067 CYP2W1Q8TAV3 490 aa18.83■□□□□ 0.6
VEGFA-205ENST00000372067 PIGOQ8TEQ8 1089 aa18.83■□□□□ 0.6
VEGFA-205ENST00000372067 IDI2Q9BXS1 227 aa18.83■□□□□ 0.6
VEGFA-205ENST00000372067 NHEJ1Q9H9Q4 299 aaPredicted RBP18.83■□□□□ 0.6
VEGFA-205ENST00000372067 TAF1LQ8IZX4 1826 aa18.83■□□□□ 0.6
VEGFA-205ENST00000372067 MATR3P43243 847 aaKnown RBP eCLIP18.83■□□□□ 0.6
VEGFA-205ENST00000372067 GPS2Q13227 327 aa18.83■□□□□ 0.6
VEGFA-205ENST00000372067 RAPGEF1Q13905 1077 aa18.83■□□□□ 0.6
VEGFA-205ENST00000372067 CTTNQ14247 550 aaKnown RBP18.83■□□□□ 0.6
VEGFA-205ENST00000372067 MAN2A1Q16706 1144 aa18.83■□□□□ 0.6
VEGFA-205ENST00000372067 CEP112Q8N8E3 955 aa18.83■□□□□ 0.6
VEGFA-205ENST00000372067 JDP2Q8WYK2 163 aa18.83■□□□□ 0.6
VEGFA-205ENST00000372067 BHMT2Q9H2M3 363 aa18.83■□□□□ 0.6
VEGFA-205ENST00000372067 LAMB1P07942 1786 aa18.83■□□□□ 0.6
VEGFA-205ENST00000372067 H3BQF6 201 aa18.82■□□□□ 0.6
VEGFA-205ENST00000372067 MMS22LQ6ZRQ5 1243 aa18.82■□□□□ 0.6
VEGFA-205ENST00000372067 GUF1Q8N442 669 aaKnown RBP18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms