RNA–Protein interactions for RNA: ENST00000371419.6

PFDN4-201, Transcript of prefoldin subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-201ENST00000371419 UBE2Q1Q7Z7E8 422 aa18.07■□□□□ 0.48
PFDN4-201ENST00000371419 NOSTRINQ8IVI9 506 aa18.07■□□□□ 0.48
PFDN4-201ENST00000371419 DIS3LQ8TF46 1054 aaKnown RBP18.07■□□□□ 0.48
PFDN4-201ENST00000371419 AFG1LQ8WV93 481 aa18.07■□□□□ 0.48
PFDN4-201ENST00000371419 PAWRQ96IZ0 340 aaKnown RBP18.07■□□□□ 0.48
PFDN4-201ENST00000371419 NAP1L4Q99733 375 aaKnown RBP18.07■□□□□ 0.48
PFDN4-201ENST00000371419 AGO4Q9HCK5 861 aaKnown RBP18.07■□□□□ 0.48
PFDN4-201ENST00000371419 PKD2L1Q9P0L9 805 aa18.07■□□□□ 0.48
PFDN4-201ENST00000371419 PHF24Q9UPV7 400 aa18.07■□□□□ 0.48
PFDN4-201ENST00000371419 MOXD2PA6NHM9 499 aa18.07■□□□□ 0.48
PFDN4-201ENST00000371419 KIF28PB7ZC32 967 aa18.07■□□□□ 0.48
PFDN4-201ENST00000371419 SORBS3O60504 671 aa18.07■□□□□ 0.48
PFDN4-201ENST00000371419 TDP2O95551 362 aa18.07■□□□□ 0.48
PFDN4-201ENST00000371419 GCFC2P16383 781 aaKnown RBP18.07■□□□□ 0.48
PFDN4-201ENST00000371419 Q4G0T1 1027 aa18.07■□□□□ 0.48
PFDN4-201ENST00000371419 MCTP1Q6DN14 999 aa18.07■□□□□ 0.48
PFDN4-201ENST00000371419 PPP4R3AQ6IN85 833 aa18.07■□□□□ 0.48
PFDN4-201ENST00000371419 PPTC7Q8NI37 304 aa18.07■□□□□ 0.48
PFDN4-201ENST00000371419 LENG9Q96B70 501 aa18.07■□□□□ 0.48
PFDN4-201ENST00000371419 SPATA33Q96N06 139 aa18.07■□□□□ 0.48
PFDN4-201ENST00000371419 MBOAT7Q96N66 472 aa18.07■□□□□ 0.48
PFDN4-201ENST00000371419 C11orf49Q9H6J7 331 aa18.07■□□□□ 0.48
PFDN4-201ENST00000371419 BCAS3Q9H6U6 928 aa18.07■□□□□ 0.48
PFDN4-201ENST00000371419 NFASCO94856 1347 aa18.06■□□□□ 0.48
PFDN4-201ENST00000371419 CCNT1O60563 726 aaKnown RBP18.06■□□□□ 0.48
PFDN4-201ENST00000371419 ASGR1P07306 291 aa18.06■□□□□ 0.48
PFDN4-201ENST00000371419 MMP3P08254 477 aa18.06■□□□□ 0.48
PFDN4-201ENST00000371419 COL6A1P12109 1028 aa18.06■□□□□ 0.48
PFDN4-201ENST00000371419 ACLYP53396 1101 aa18.06■□□□□ 0.48
PFDN4-201ENST00000371419 SDF4Q9BRK5 362 aa18.06■□□□□ 0.48
PFDN4-201ENST00000371419 ZNF577Q9BSK1 485 aa18.06■□□□□ 0.48
PFDN4-201ENST00000371419 DDX25Q9UHL0 483 aaKnown RBP18.06■□□□□ 0.48
PFDN4-201ENST00000371419 IPO5O00410 1097 aaKnown RBP18.05■□□□□ 0.48
PFDN4-201ENST00000371419 KPNA6O60684 536 aa18.05■□□□□ 0.48
PFDN4-201ENST00000371419 SYT1P21579 422 aa18.05■□□□□ 0.48
PFDN4-201ENST00000371419 NUCB2P80303 420 aa18.05■□□□□ 0.48
PFDN4-201ENST00000371419 ITGB3BPQ13352 177 aaPredicted RBP18.05■□□□□ 0.48
PFDN4-201ENST00000371419 HSDL1Q3SXM5 330 aa18.05■□□□□ 0.48
PFDN4-201ENST00000371419 SENP6Q9GZR1 1112 aaPredicted RBP18.05■□□□□ 0.48
PFDN4-201ENST00000371419 POLR3EQ9NVU0 708 aa18.05■□□□□ 0.48
PFDN4-201ENST00000371419 MKI67P46013 3256 aaKnown RBP18.04■□□□□ 0.48
PFDN4-201ENST00000371419 VPS37CA5D8V6 355 aaPredicted RBP18.04■□□□□ 0.48
PFDN4-201ENST00000371419 NOP56O00567 594 aaKnown RBP18.04■□□□□ 0.48
PFDN4-201ENST00000371419 MSH4O15457 936 aa18.04■□□□□ 0.48
PFDN4-201ENST00000371419 MYL3P08590 195 aa18.04■□□□□ 0.48
PFDN4-201ENST00000371419 DGKDQ16760 1214 aa18.04■□□□□ 0.48
PFDN4-201ENST00000371419 CXCL17Q6UXB2 119 aa18.04■□□□□ 0.48
PFDN4-201ENST00000371419 FERMT2Q96AC1 680 aa18.04■□□□□ 0.48
PFDN4-201ENST00000371419 JPH1Q9HDC5 661 aaPredicted RBP18.04■□□□□ 0.48
PFDN4-201ENST00000371419 TBC1D22BQ9NU19 505 aa18.04■□□□□ 0.48
PFDN4-201ENST00000371419 RNF216Q9NWF9 866 aaPredicted RBP18.04■□□□□ 0.48
PFDN4-201ENST00000371419 A0A1W2PQ45 241 aaPredicted RBP18.03■□□□□ 0.48
PFDN4-201ENST00000371419 A0A1W2PQY0 241 aa18.03■□□□□ 0.48
PFDN4-201ENST00000371419 SLC37A4O43826 429 aa18.03■□□□□ 0.48
PFDN4-201ENST00000371419 PPFIA4O75335 1185 aa18.03■□□□□ 0.48
PFDN4-201ENST00000371419 CABYRO75952 493 aa18.03■□□□□ 0.48
PFDN4-201ENST00000371419 HOXD8P13378 290 aaPredicted RBP18.03■□□□□ 0.48
PFDN4-201ENST00000371419 TRAPPC10P48553 1259 aa18.03■□□□□ 0.48
PFDN4-201ENST00000371419 RGS19P49795 217 aa18.03■□□□□ 0.48
PFDN4-201ENST00000371419 SP4Q02446 784 aa18.03■□□□□ 0.48
PFDN4-201ENST00000371419 GLT1D1Q96MS3 346 aa18.03■□□□□ 0.48
PFDN4-201ENST00000371419 UIMC1Q96RL1 719 aa18.03■□□□□ 0.48
PFDN4-201ENST00000371419 SLC9A2Q9UBY0 812 aa18.03■□□□□ 0.48
PFDN4-201ENST00000371419 NOL7Q9UMY1 257 aaKnown RBP18.03■□□□□ 0.48
PFDN4-201ENST00000371419 DHX15O43143 795 aaKnown RBP18.02■□□□□ 0.48
PFDN4-201ENST00000371419 ATP2B1P20020 1258 aa18.02■□□□□ 0.48
PFDN4-201ENST00000371419 PURAQ00577 322 aaKnown RBP18.02■□□□□ 0.48
PFDN4-201ENST00000371419 SLC5A5Q92911 643 aa18.02■□□□□ 0.48
PFDN4-201ENST00000371419 RIT2Q99578 217 aa18.02■□□□□ 0.48
PFDN4-201ENST00000371419 GPR20Q99678 358 aa18.02■□□□□ 0.48
PFDN4-201ENST00000371419 MTG1Q9BT17 334 aaPredicted RBP18.02■□□□□ 0.48
PFDN4-201ENST00000371419 STARD7Q9NQZ5 370 aa18.02■□□□□ 0.48
PFDN4-201ENST00000371419 DOCK5Q9H7D0 1870 aa18.02■□□□□ 0.48
PFDN4-201ENST00000371419 ELP1O95163 1332 aa18.02■□□□□ 0.47
PFDN4-201ENST00000371419 STX6O43752 255 aa18.01■□□□□ 0.47
PFDN4-201ENST00000371419 ETNPPLQ8TBG4 499 aa18.01■□□□□ 0.47
PFDN4-201ENST00000371419 VTI1AQ96AJ9 217 aa18.01■□□□□ 0.47
PFDN4-201ENST00000371419 GBP4Q96PP9 640 aa18.01■□□□□ 0.47
PFDN4-201ENST00000371419 TCEAL9Q9UHQ7 104 aa18.01■□□□□ 0.47
PFDN4-201ENST00000371419 DDX39AO00148 427 aaKnown RBP18.01■□□□□ 0.47
PFDN4-201ENST00000371419 WNT7AO00755 349 aa18.01■□□□□ 0.47
PFDN4-201ENST00000371419 TBX3O15119 743 aa18.01■□□□□ 0.47
PFDN4-201ENST00000371419 GAS7O60861 476 aa18.01■□□□□ 0.47
PFDN4-201ENST00000371419 PDIA4P13667 645 aaKnown RBP18.01■□□□□ 0.47
PFDN4-201ENST00000371419 ORC2Q13416 577 aaPredicted RBP18.01■□□□□ 0.47
PFDN4-201ENST00000371419 TTC38Q5R3I4 469 aa18.01■□□□□ 0.47
PFDN4-201ENST00000371419 LRCH2Q5VUJ6 765 aa18.01■□□□□ 0.47
PFDN4-201ENST00000371419 SEPT1Q8WYJ6 367 aa18.01■□□□□ 0.47
PFDN4-201ENST00000371419 FAM20AQ96MK3 541 aa18.01■□□□□ 0.47
PFDN4-201ENST00000371419 KCNMB3Q9NPA1 279 aa18.01■□□□□ 0.47
PFDN4-201ENST00000371419 TELO2Q9Y4R8 837 aa18.01■□□□□ 0.47
PFDN4-201ENST00000371419 GSTTP1A0A1W2PQM5 241 aa18■□□□□ 0.47
PFDN4-201ENST00000371419 MARCH6O60337 910 aa18■□□□□ 0.47
PFDN4-201ENST00000371419 PTMSP20962 102 aa18■□□□□ 0.47
PFDN4-201ENST00000371419 MCM7P33993 719 aa18■□□□□ 0.47
PFDN4-201ENST00000371419 ATN1P54259 1190 aaPredicted RBP18■□□□□ 0.47
PFDN4-201ENST00000371419 ACTR2P61160 394 aa18■□□□□ 0.47
PFDN4-201ENST00000371419 KRT76Q01546 638 aa18■□□□□ 0.47
PFDN4-201ENST00000371419 RILPL1Q5EBL4 403 aa18■□□□□ 0.47
PFDN4-201ENST00000371419 ZNF746Q6NUN9 644 aaPredicted RBP18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms