RNA–Protein interactions for RNA: ENST00000370656.5

RPF1-202, Transcript of ribosome production factor 1 homolog, humanhuman

TSL 2 BASIC

Gene RPF1, Length 724 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-202ENST00000370656 QRICH1Q2TAL8 776 aa17.47■□□□□ 0.39
RPF1-202ENST00000370656 TRAF7Q6Q0C0 670 aa17.47■□□□□ 0.39
RPF1-202ENST00000370656 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.47■□□□□ 0.39
RPF1-202ENST00000370656 SPATA33Q96N06 139 aa17.47■□□□□ 0.39
RPF1-202ENST00000370656 IPO9Q96P70 1041 aaKnown RBP17.47■□□□□ 0.39
RPF1-202ENST00000370656 LSG1Q9H089 658 aaKnown RBP17.47■□□□□ 0.39
RPF1-202ENST00000370656 NEDD4P46934 1319 aa17.47■□□□□ 0.39
RPF1-202ENST00000370656 GRXCR2A6NFK2 248 aa17.46■□□□□ 0.39
RPF1-202ENST00000370656 HOXD8P13378 290 aaPredicted RBP17.46■□□□□ 0.39
RPF1-202ENST00000370656 IL9P15248 144 aa17.46■□□□□ 0.39
RPF1-202ENST00000370656 HTRA4P83105 476 aaPredicted RBP17.46■□□□□ 0.39
RPF1-202ENST00000370656 MBTPS1Q14703 1052 aa17.46■□□□□ 0.39
RPF1-202ENST00000370656 SERINC5Q86VE9 423 aa17.46■□□□□ 0.39
RPF1-202ENST00000370656 DBF4BQ8NFT6 615 aa17.46■□□□□ 0.39
RPF1-202ENST00000370656 YME1L1Q96TA2 773 aa17.46■□□□□ 0.39
RPF1-202ENST00000370656 AMNQ9BXJ7 453 aa17.46■□□□□ 0.39
RPF1-202ENST00000370656 VAT1LQ9HCJ6 419 aa17.46■□□□□ 0.39
RPF1-202ENST00000370656 MAP3K20Q9NYL2 800 aaKnown RBP17.46■□□□□ 0.39
RPF1-202ENST00000370656 C17orf102A2RUQ5 167 aa17.45■□□□□ 0.38
RPF1-202ENST00000370656 KDM4AO75164 1064 aa17.45■□□□□ 0.38
RPF1-202ENST00000370656 TGFB3P10600 412 aa17.45■□□□□ 0.38
RPF1-202ENST00000370656 MYCLP12524 364 aaPredicted RBP17.45■□□□□ 0.38
RPF1-202ENST00000370656 MRE11P49959 708 aa17.45■□□□□ 0.38
RPF1-202ENST00000370656 ANAPC15P60006 121 aa17.45■□□□□ 0.38
RPF1-202ENST00000370656 ZNF200P98182 395 aaPredicted RBP17.45■□□□□ 0.38
RPF1-202ENST00000370656 EPC2Q52LR7 807 aa17.45■□□□□ 0.38
RPF1-202ENST00000370656 CELF3Q5SZQ8 465 aaKnown RBP17.45■□□□□ 0.38
RPF1-202ENST00000370656 MYSM1Q5VVJ2 828 aa17.45■□□□□ 0.38
RPF1-202ENST00000370656 CWC27Q6UX04 472 aaKnown RBP17.45■□□□□ 0.38
RPF1-202ENST00000370656 SEPT8Q92599 483 aa17.45■□□□□ 0.38
RPF1-202ENST00000370656 ANKS1AQ92625 1134 aa17.45■□□□□ 0.38
RPF1-202ENST00000370656 KCNB2Q92953 911 aa17.45■□□□□ 0.38
RPF1-202ENST00000370656 ATP6V0A1Q93050 837 aa17.45■□□□□ 0.38
RPF1-202ENST00000370656 WNT8BQ93098 351 aa17.45■□□□□ 0.38
RPF1-202ENST00000370656 ZSCAN10Q96SZ4 725 aaPredicted RBP17.45■□□□□ 0.38
RPF1-202ENST00000370656 JMJD4Q9H9V9 463 aa17.45■□□□□ 0.38
RPF1-202ENST00000370656 RALGAPA2Q2PPJ7 1873 aa17.45■□□□□ 0.38
RPF1-202ENST00000370656 GGPS1O95749 300 aa17.44■□□□□ 0.38
RPF1-202ENST00000370656 HSD17B4P51659 736 aa17.44■□□□□ 0.38
RPF1-202ENST00000370656 GPM6BQ13491 265 aa17.44■□□□□ 0.38
RPF1-202ENST00000370656 HSDL1Q3SXM5 330 aa17.44■□□□□ 0.38
RPF1-202ENST00000370656 PLEKHG4Q58EX7 1191 aa17.44■□□□□ 0.38
RPF1-202ENST00000370656 SAMD3Q8N6K7 520 aa17.44■□□□□ 0.38
RPF1-202ENST00000370656 BANK1Q8NDB2 785 aa17.44■□□□□ 0.38
RPF1-202ENST00000370656 NEK9Q8TD19 979 aa17.44■□□□□ 0.38
RPF1-202ENST00000370656 MLXIPQ9HAP2 919 aa17.44■□□□□ 0.38
RPF1-202ENST00000370656 H3BNC9 293 aa17.43■□□□□ 0.38
RPF1-202ENST00000370656 DCXO43602 365 aa17.43■□□□□ 0.38
RPF1-202ENST00000370656 CAND2O75155 1236 aa17.43■□□□□ 0.38
RPF1-202ENST00000370656 TRAF1Q13077 416 aa17.43■□□□□ 0.38
RPF1-202ENST00000370656 EP400NLQ6ZTU2 488 aa17.43■□□□□ 0.38
RPF1-202ENST00000370656 STOX1Q6ZVD7 989 aa17.43■□□□□ 0.38
RPF1-202ENST00000370656 PABPC5Q96DU9 382 aaKnown RBP17.43■□□□□ 0.38
RPF1-202ENST00000370656 PDCD2LQ9BRP1 358 aa17.43■□□□□ 0.38
RPF1-202ENST00000370656 PRKAG3Q9UGI9 489 aa17.43■□□□□ 0.38
RPF1-202ENST00000370656 KAT6AQ92794 2004 aa17.43■□□□□ 0.38
RPF1-202ENST00000370656 TRIOO75962 3097 aa17.43■□□□□ 0.38
RPF1-202ENST00000370656 B4E1Z4 1266 aa17.42■□□□□ 0.38
RPF1-202ENST00000370656 H3BQ06 376 aaPredicted RBP17.42■□□□□ 0.38
RPF1-202ENST00000370656 H3BRB1 525 aa17.42■□□□□ 0.38
RPF1-202ENST00000370656 NCK2O43639 380 aa17.42■□□□□ 0.38
RPF1-202ENST00000370656 SORBS3O60504 671 aa17.42■□□□□ 0.38
RPF1-202ENST00000370656 GNAT1P11488 350 aa17.42■□□□□ 0.38
RPF1-202ENST00000370656 HSPA4P34932 840 aa17.42■□□□□ 0.38
RPF1-202ENST00000370656 GHRHRQ02643 423 aa17.42■□□□□ 0.38
RPF1-202ENST00000370656 MKRN4PQ13434 485 aaPredicted RBP17.42■□□□□ 0.38
RPF1-202ENST00000370656 VSIG10LQ86VR7 867 aa17.42■□□□□ 0.38
RPF1-202ENST00000370656 TMEM192Q8IY95 271 aa17.42■□□□□ 0.38
RPF1-202ENST00000370656 ENAHQ8N8S7 591 aaPredicted RBP17.42■□□□□ 0.38
RPF1-202ENST00000370656 MAP4K1Q92918 833 aa17.42■□□□□ 0.38
RPF1-202ENST00000370656 TOP1MTQ969P6 601 aa17.42■□□□□ 0.38
RPF1-202ENST00000370656 UBAC1Q9BSL1 405 aa17.42■□□□□ 0.38
RPF1-202ENST00000370656 C16orf70Q9BSU1 422 aa17.42■□□□□ 0.38
RPF1-202ENST00000370656 KRT23Q9C075 422 aa17.42■□□□□ 0.38
RPF1-202ENST00000370656 NSUN3Q9H649 340 aaKnown RBP17.42■□□□□ 0.38
RPF1-202ENST00000370656 TUT1Q9H6E5 874 aaKnown RBP17.42■□□□□ 0.38
RPF1-202ENST00000370656 PCDHA1Q9Y5I3 950 aa17.42■□□□□ 0.38
RPF1-202ENST00000370656 WDFY4Q6ZS81 3184 aa17.42■□□□□ 0.38
RPF1-202ENST00000370656 COL4A6Q14031 1691 aa17.42■□□□□ 0.38
RPF1-202ENST00000370656 NOP56O00567 594 aaKnown RBP17.41■□□□□ 0.38
RPF1-202ENST00000370656 RGS20O76081 388 aa17.41■□□□□ 0.38
RPF1-202ENST00000370656 UPP2O95045 317 aa17.41■□□□□ 0.38
RPF1-202ENST00000370656 ATXN8OSP0DMR3 200 aa17.41■□□□□ 0.38
RPF1-202ENST00000370656 UBA1P22314 1058 aaKnown RBP17.41■□□□□ 0.38
RPF1-202ENST00000370656 CCND2P30279 289 aa17.41■□□□□ 0.38
RPF1-202ENST00000370656 PGM5Q15124 567 aa17.41■□□□□ 0.38
RPF1-202ENST00000370656 IMMTQ16891 758 aaKnown RBP17.41■□□□□ 0.38
RPF1-202ENST00000370656 APBB2Q92870 758 aa17.41■□□□□ 0.38
RPF1-202ENST00000370656 SNX21Q969T3 373 aa17.41■□□□□ 0.38
RPF1-202ENST00000370656 UPF3BQ9BZI7 483 aaKnown RBP17.41■□□□□ 0.38
RPF1-202ENST00000370656 KCNH6Q9H252 994 aa17.41■□□□□ 0.38
RPF1-202ENST00000370656 ANO2Q9NQ90 1003 aa17.41■□□□□ 0.38
RPF1-202ENST00000370656 ZSWIM5Q9P217 1185 aa17.41■□□□□ 0.38
RPF1-202ENST00000370656 C5orf42Q9H799 3197 aa17.4■□□□□ 0.38
RPF1-202ENST00000370656 ZBTB5O15062 677 aa17.4■□□□□ 0.38
RPF1-202ENST00000370656 SMIM10L2AP0DMW4 78 aa17.4■□□□□ 0.38
RPF1-202ENST00000370656 SMIM10L2BP0DMW5 78 aa17.4■□□□□ 0.38
RPF1-202ENST00000370656 HIC1Q14526 733 aa17.4■□□□□ 0.38
RPF1-202ENST00000370656 TCEAL5Q5H9L2 206 aa17.4■□□□□ 0.38
RPF1-202ENST00000370656 IFIT1BQ5T764 474 aaKnown RBP17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms