RNA–Protein interactions for RNA: ENST00000370025.8

PRPF38B-203, Transcript of pre-mRNA processing factor 38B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38B, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-203ENST00000370025 MRPL11Q9Y3B7 192 aaKnown RBP11.08□□□□□ -0.64
PRPF38B-203ENST00000370025 VSNL1P62760 191 aa11.08□□□□□ -0.64
PRPF38B-203ENST00000370025 STIM1Q13586 685 aa11.08□□□□□ -0.64
PRPF38B-203ENST00000370025 TADA2BQ86TJ2 420 aa11.08□□□□□ -0.64
PRPF38B-203ENST00000370025 SLFN12Q8IYM2 578 aa11.08□□□□□ -0.64
PRPF38B-203ENST00000370025 KAT2BQ92831 832 aa11.08□□□□□ -0.64
PRPF38B-203ENST00000370025 GLIS2Q9BZE0 524 aaPredicted RBP11.08□□□□□ -0.64
PRPF38B-203ENST00000370025 SPON1Q9HCB6 807 aa11.08□□□□□ -0.64
PRPF38B-203ENST00000370025 MRFAP1Q9Y605 127 aa11.08□□□□□ -0.64
PRPF38B-203ENST00000370025 ZNF541Q9H0D2 1346 aa11.08□□□□□ -0.64
PRPF38B-203ENST00000370025 POTEMA6NI47 508 aa11.07□□□□□ -0.64
PRPF38B-203ENST00000370025 PIK3CDO00329 1044 aa11.07□□□□□ -0.64
PRPF38B-203ENST00000370025 ZNF18P17022 549 aa11.07□□□□□ -0.64
PRPF38B-203ENST00000370025 PPP2R5AQ15172 486 aa11.07□□□□□ -0.64
PRPF38B-203ENST00000370025 MMS22LQ6ZRQ5 1243 aa11.07□□□□□ -0.64
PRPF38B-203ENST00000370025 CCDC84Q86UT8 332 aaPredicted RBP11.07□□□□□ -0.64
PRPF38B-203ENST00000370025 APOBEC3FQ8IUX4 373 aaKnown RBP11.07□□□□□ -0.64
PRPF38B-203ENST00000370025 HAS1Q92839 578 aa11.07□□□□□ -0.64
PRPF38B-203ENST00000370025 CTNND2Q9UQB3 1225 aa11.07□□□□□ -0.64
PRPF38B-203ENST00000370025 SREBF1P36956 1147 aa11.07□□□□□ -0.64
PRPF38B-203ENST00000370025 MAP3K9P80192 1104 aa11.07□□□□□ -0.64
PRPF38B-203ENST00000370025 PAK1Q13153 545 aa11.07□□□□□ -0.64
PRPF38B-203ENST00000370025 CASP8Q14790 479 aa11.07□□□□□ -0.64
PRPF38B-203ENST00000370025 ZNF569Q5MCW4 686 aa11.07□□□□□ -0.64
PRPF38B-203ENST00000370025 LPAR1Q92633 364 aa11.07□□□□□ -0.64
PRPF38B-203ENST00000370025 RABGGTAQ92696 567 aa11.07□□□□□ -0.64
PRPF38B-203ENST00000370025 C7orf25Q9BPX7 421 aa11.07□□□□□ -0.64
PRPF38B-203ENST00000370025 LRRC27Q9C0I9 530 aa11.07□□□□□ -0.64
PRPF38B-203ENST00000370025 SAMSN1Q9NSI8 373 aaKnown RBP11.07□□□□□ -0.64
PRPF38B-203ENST00000370025 ASTN2O75129 1339 aaPredicted RBP11.07□□□□□ -0.64
PRPF38B-203ENST00000370025 CCP110O43303 1012 aa11.07□□□□□ -0.64
PRPF38B-203ENST00000370025 SCP2P22307 547 aa11.07□□□□□ -0.64
PRPF38B-203ENST00000370025 HOXA13P31271 388 aaPredicted RBP11.07□□□□□ -0.64
PRPF38B-203ENST00000370025 ZNF76P36508 570 aa11.07□□□□□ -0.64
PRPF38B-203ENST00000370025 GRB10Q13322 594 aa11.07□□□□□ -0.64
PRPF38B-203ENST00000370025 GSPT2Q8IYD1 628 aaKnown RBP11.07□□□□□ -0.64
PRPF38B-203ENST00000370025 EEF2KMTQ96G04 330 aa11.07□□□□□ -0.64
PRPF38B-203ENST00000370025 MBOAT7Q96N66 472 aa11.07□□□□□ -0.64
PRPF38B-203ENST00000370025 MED15Q96RN5 788 aa11.07□□□□□ -0.64
PRPF38B-203ENST00000370025 EHMT1Q9H9B1 1298 aa11.07□□□□□ -0.64
PRPF38B-203ENST00000370025 RWDD2AQ9UIY3 292 aa11.07□□□□□ -0.64
PRPF38B-203ENST00000370025 ATAD5Q96QE3 1844 aa11.07□□□□□ -0.64
PRPF38B-203ENST00000370025 CCDC151A5D8V7 595 aa11.06□□□□□ -0.64
PRPF38B-203ENST00000370025 GCOM1H8Y6P7 765 aaPredicted RBP11.06□□□□□ -0.64
PRPF38B-203ENST00000370025 WDR46O15213 610 aaKnown RBP11.06□□□□□ -0.64
PRPF38B-203ENST00000370025 RHOBTB3O94955 611 aa11.06□□□□□ -0.64
PRPF38B-203ENST00000370025 CFBP00751 764 aa11.06□□□□□ -0.64
PRPF38B-203ENST00000370025 POLR2MP0CAP2 368 aa11.06□□□□□ -0.64
PRPF38B-203ENST00000370025 LMNB1P20700 586 aa11.06□□□□□ -0.64
PRPF38B-203ENST00000370025 ASIC1P78348 528 aa11.06□□□□□ -0.64
PRPF38B-203ENST00000370025 BEND6Q5SZJ8 279 aaPredicted RBP11.06□□□□□ -0.64
PRPF38B-203ENST00000370025 NBPF12Q5TAG4 269 aaPredicted RBP11.06□□□□□ -0.64
PRPF38B-203ENST00000370025 TRIM9Q9C026 710 aa11.06□□□□□ -0.64
PRPF38B-203ENST00000370025 KIAA1683Q9H0B3 1180 aa11.06□□□□□ -0.64
PRPF38B-203ENST00000370025 SLC24A3Q9HC58 644 aa11.06□□□□□ -0.64
PRPF38B-203ENST00000370025 EXOC1Q9NV70 894 aa11.06□□□□□ -0.64
PRPF38B-203ENST00000370025 TBX3O15119 743 aa11.06□□□□□ -0.64
PRPF38B-203ENST00000370025 ATP8B1O43520 1251 aa11.06□□□□□ -0.64
PRPF38B-203ENST00000370025 RNF40O75150 1001 aa11.06□□□□□ -0.64
PRPF38B-203ENST00000370025 PRR16Q569H4 304 aa11.06□□□□□ -0.64
PRPF38B-203ENST00000370025 FCHSD1Q86WN1 690 aa11.06□□□□□ -0.64
PRPF38B-203ENST00000370025 NELFBQ8WX92 580 aa11.06□□□□□ -0.64
PRPF38B-203ENST00000370025 LARP4BQ92615 738 aaKnown RBP11.06□□□□□ -0.64
PRPF38B-203ENST00000370025 MRPL44Q9H9J2 332 aaKnown RBP11.06□□□□□ -0.64
PRPF38B-203ENST00000370025 KCNMB3Q9NPA1 279 aa11.06□□□□□ -0.64
PRPF38B-203ENST00000370025 ABCB11O95342 1321 aa11.06□□□□□ -0.64
PRPF38B-203ENST00000370025 GOLGB1Q14789 3259 aaKnown RBP11.06□□□□□ -0.64
PRPF38B-203ENST00000370025 KDM3AQ9Y4C1 1321 aa11.06□□□□□ -0.64
PRPF38B-203ENST00000370025 SOWAHDA6NJG2 315 aa11.06□□□□□ -0.64
PRPF38B-203ENST00000370025 KLRC4O43908 158 aa11.06□□□□□ -0.64
PRPF38B-203ENST00000370025 Q4G0T1 1027 aa11.06□□□□□ -0.64
PRPF38B-203ENST00000370025 ANGEL2Q5VTE6 544 aaKnown RBP11.06□□□□□ -0.64
PRPF38B-203ENST00000370025 KIRREL3Q8IZU9 778 aa11.06□□□□□ -0.64
PRPF38B-203ENST00000370025 CRYGNQ8WXF5 182 aa11.06□□□□□ -0.64
PRPF38B-203ENST00000370025 PNMA5Q96PV4 448 aa11.06□□□□□ -0.64
PRPF38B-203ENST00000370025 CTAGE1Q96RT6 745 aa11.06□□□□□ -0.64
PRPF38B-203ENST00000370025 NT5C3AQ9H0P0 336 aa11.06□□□□□ -0.64
PRPF38B-203ENST00000370025 FBXO28Q9NVF7 368 aa11.06□□□□□ -0.64
PRPF38B-203ENST00000370025 GDAQ9Y2T3 454 aa11.06□□□□□ -0.64
PRPF38B-203ENST00000370025 LRRIQ3A6PVS8 624 aaPredicted RBP11.05□□□□□ -0.64
PRPF38B-203ENST00000370025 OPLAHO14841 1288 aa11.05□□□□□ -0.64
PRPF38B-203ENST00000370025 SLC26A4O43511 780 aa11.05□□□□□ -0.64
PRPF38B-203ENST00000370025 ERLIN1O75477 346 aa11.05□□□□□ -0.64
PRPF38B-203ENST00000370025 TAL1P17542 331 aaPredicted RBP11.05□□□□□ -0.64
PRPF38B-203ENST00000370025 CCT6AP40227 531 aaKnown RBP11.05□□□□□ -0.64
PRPF38B-203ENST00000370025 PRCPP42785 496 aa11.05□□□□□ -0.64
PRPF38B-203ENST00000370025 PDE4DQ08499 809 aa11.05□□□□□ -0.64
PRPF38B-203ENST00000370025 FILIP1LQ4L180 1135 aa11.05□□□□□ -0.64
PRPF38B-203ENST00000370025 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.05□□□□□ -0.64
PRPF38B-203ENST00000370025 GPC2Q8N158 579 aa11.05□□□□□ -0.64
PRPF38B-203ENST00000370025 PRPF38AQ8NAV1 312 aaKnown RBP11.05□□□□□ -0.64
PRPF38B-203ENST00000370025 LRRC15Q8TF66 581 aa11.05□□□□□ -0.64
PRPF38B-203ENST00000370025 PCMTD1Q96MG8 357 aaPredicted RBP11.05□□□□□ -0.64
PRPF38B-203ENST00000370025 ANKZF1Q9H8Y5 726 aa11.05□□□□□ -0.64
PRPF38B-203ENST00000370025 GPRC5DQ9NZD1 345 aa11.05□□□□□ -0.64
PRPF38B-203ENST00000370025 ERCC3P19447 782 aa11.05□□□□□ -0.64
PRPF38B-203ENST00000370025 CIITAP33076 1130 aa11.05□□□□□ -0.64
PRPF38B-203ENST00000370025 PPP1R2P41236 205 aa11.05□□□□□ -0.64
PRPF38B-203ENST00000370025 USP14P54578 494 aa11.05□□□□□ -0.64
PRPF38B-203ENST00000370025 MRPS25P82663 173 aaKnown RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms