RNA–Protein interactions for RNA: ENST00000369089.3

PRDM1-201, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 4,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-201ENST00000369089 AGBL2Q5U5Z8 902 aa11.27□□□□□ -0.6
PRDM1-201ENST00000369089 KSR2Q6VAB6 950 aa11.27□□□□□ -0.6
PRDM1-201ENST00000369089 FLCNQ8NFG4 579 aa11.27□□□□□ -0.6
PRDM1-201ENST00000369089 NLRP7Q8WX94 980 aa11.27□□□□□ -0.6
PRDM1-201ENST00000369089 RBM17Q96I25 401 aaKnown RBP11.27□□□□□ -0.6
PRDM1-201ENST00000369089 ORAI2Q96SN7 254 aa11.27□□□□□ -0.6
PRDM1-201ENST00000369089 DCLRE1BQ9H816 532 aa11.27□□□□□ -0.6
PRDM1-201ENST00000369089 OLFML3Q9NRN5 406 aa11.27□□□□□ -0.6
PRDM1-201ENST00000369089 NBPF26B4DH59 902 aa11.27□□□□□ -0.61
PRDM1-201ENST00000369089 KCNK3O14649 394 aa11.27□□□□□ -0.61
PRDM1-201ENST00000369089 RIPK1Q13546 671 aa11.27□□□□□ -0.61
PRDM1-201ENST00000369089 TRIM16LQ309B1 348 aa11.27□□□□□ -0.61
PRDM1-201ENST00000369089 KCTD21Q4G0X4 260 aa11.27□□□□□ -0.61
PRDM1-201ENST00000369089 TRIM65Q6PJ69 517 aa11.27□□□□□ -0.61
PRDM1-201ENST00000369089 FAM47EQ6ZV65 393 aa11.27□□□□□ -0.61
PRDM1-201ENST00000369089 PDZD8Q8NEN9 1154 aa11.27□□□□□ -0.61
PRDM1-201ENST00000369089 RFWD2Q8NHY2 731 aa11.27□□□□□ -0.61
PRDM1-201ENST00000369089 PREBQ9HCU5 417 aa11.27□□□□□ -0.61
PRDM1-201ENST00000369089 LRP2BPQ9P2M1 347 aa11.27□□□□□ -0.61
PRDM1-201ENST00000369089 ZFYVE16Q7Z3T8 1539 aa11.27□□□□□ -0.61
PRDM1-201ENST00000369089 KLF18A0A0U1RQI7 1052 aa11.27□□□□□ -0.61
PRDM1-201ENST00000369089 RGS2P41220 211 aa11.27□□□□□ -0.61
PRDM1-201ENST00000369089 ELOA2Q8IYF1 753 aaPredicted RBP11.27□□□□□ -0.61
PRDM1-201ENST00000369089 UHMK1Q8TAS1 419 aaKnown RBP11.27□□□□□ -0.61
PRDM1-201ENST00000369089 PGBD1Q96JS3 809 aa11.27□□□□□ -0.61
PRDM1-201ENST00000369089 MRPL44Q9H9J2 332 aaKnown RBP11.27□□□□□ -0.61
PRDM1-201ENST00000369089 DDX28Q9NUL7 540 aaKnown RBP11.27□□□□□ -0.61
PRDM1-201ENST00000369089 ZBTB21Q9ULJ3 1066 aa11.27□□□□□ -0.61
PRDM1-201ENST00000369089 UGGT1Q9NYU2 1555 aa11.27□□□□□ -0.61
PRDM1-201ENST00000369089 KAT6BQ8WYB5 2073 aa11.27□□□□□ -0.61
PRDM1-201ENST00000369089 OPLAHO14841 1288 aa11.27□□□□□ -0.61
PRDM1-201ENST00000369089 ZWINTO95229 277 aa11.27□□□□□ -0.61
PRDM1-201ENST00000369089 TMOD1P28289 359 aa11.27□□□□□ -0.61
PRDM1-201ENST00000369089 MCL1Q07820 350 aa11.27□□□□□ -0.61
PRDM1-201ENST00000369089 RASA3Q14644 834 aa11.27□□□□□ -0.61
PRDM1-201ENST00000369089 TRIM67Q6ZTA4 783 aa11.27□□□□□ -0.61
PRDM1-201ENST00000369089 NFATC2IPQ8NCF5 419 aa11.27□□□□□ -0.61
PRDM1-201ENST00000369089 ICA1LQ8NDH6 482 aa11.27□□□□□ -0.61
PRDM1-201ENST00000369089 GGT7Q9UJ14 662 aa11.27□□□□□ -0.61
PRDM1-201ENST00000369089 ZNF652Q9Y2D9 606 aa11.27□□□□□ -0.61
PRDM1-201ENST00000369089 KDM5DQ9BY66 1539 aa11.26□□□□□ -0.61
PRDM1-201ENST00000369089 POLR2DO15514 142 aaKnown RBP11.26□□□□□ -0.61
PRDM1-201ENST00000369089 ATP6V1C1P21283 382 aa11.26□□□□□ -0.61
PRDM1-201ENST00000369089 TUFMP49411 452 aaKnown RBP11.26□□□□□ -0.61
PRDM1-201ENST00000369089 CLCN2P51788 898 aa11.26□□□□□ -0.61
PRDM1-201ENST00000369089 KRT76Q01546 638 aa11.26□□□□□ -0.61
PRDM1-201ENST00000369089 MKRN3Q13064 507 aaKnown RBP11.26□□□□□ -0.61
PRDM1-201ENST00000369089 XRCC4Q13426 336 aa11.26□□□□□ -0.61
PRDM1-201ENST00000369089 DHX32Q7L7V1 743 aaKnown RBP11.26□□□□□ -0.61
PRDM1-201ENST00000369089 ERMNQ8TAM6 284 aa11.26□□□□□ -0.61
PRDM1-201ENST00000369089 SUN5Q8TC36 379 aa11.26□□□□□ -0.61
PRDM1-201ENST00000369089 RIOK1Q9BRS2 568 aaKnown RBP11.26□□□□□ -0.61
PRDM1-201ENST00000369089 CRNKL1Q9BZJ0 848 aaKnown RBP11.26□□□□□ -0.61
PRDM1-201ENST00000369089 GMEB1Q9Y692 573 aa11.26□□□□□ -0.61
PRDM1-201ENST00000369089 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.26□□□□□ -0.61
PRDM1-201ENST00000369089 ANKRD33BA6NCL7 494 aa11.26□□□□□ -0.61
PRDM1-201ENST00000369089 RASGRF2O14827 1237 aa11.26□□□□□ -0.61
PRDM1-201ENST00000369089 SLC27A2O14975 620 aa11.26□□□□□ -0.61
PRDM1-201ENST00000369089 ARHGEF9O43307 516 aa11.26□□□□□ -0.61
PRDM1-201ENST00000369089 MMEL1Q495T6 779 aa11.26□□□□□ -0.61
PRDM1-201ENST00000369089 TYW1BQ6NUM6 668 aa11.26□□□□□ -0.61
PRDM1-201ENST00000369089 TTLL7Q6ZT98 887 aa11.26□□□□□ -0.61
PRDM1-201ENST00000369089 MAEAQ7L5Y9 396 aa11.26□□□□□ -0.61
PRDM1-201ENST00000369089 DTX3LQ8TDB6 740 aa11.26□□□□□ -0.61
PRDM1-201ENST00000369089 NOC4LQ9BVI4 516 aaKnown RBP11.26□□□□□ -0.61
PRDM1-201ENST00000369089 RTEL1Q9NZ71 1219 aa11.26□□□□□ -0.61
PRDM1-201ENST00000369089 BARX2Q9UMQ3 279 aaPredicted RBP11.26□□□□□ -0.61
PRDM1-201ENST00000369089 I3L4J1 428 aa11.26□□□□□ -0.61
PRDM1-201ENST00000369089 GRM8O00222 908 aa11.26□□□□□ -0.61
PRDM1-201ENST00000369089 CHL1O00533 1208 aa11.26□□□□□ -0.61
PRDM1-201ENST00000369089 SHOX2O60902 331 aaPredicted RBP11.26□□□□□ -0.61
PRDM1-201ENST00000369089 MARK3P27448 753 aa11.26□□□□□ -0.61
PRDM1-201ENST00000369089 ARID5AQ03989 594 aa11.26□□□□□ -0.61
PRDM1-201ENST00000369089 PPIDQ08752 370 aaKnown RBP11.26□□□□□ -0.61
PRDM1-201ENST00000369089 NGLY1Q96IV0 654 aa11.26□□□□□ -0.61
PRDM1-201ENST00000369089 WDR35Q9P2L0 1181 aa11.26□□□□□ -0.61
PRDM1-201ENST00000369089 ATP6V0A2Q9Y487 856 aa11.26□□□□□ -0.61
PRDM1-201ENST00000369089 PCDHA5Q9Y5H7 936 aa11.26□□□□□ -0.61
PRDM1-201ENST00000369089 GOLGA8TH3BQL2 631 aa11.26□□□□□ -0.61
PRDM1-201ENST00000369089 GIPC1O14908 333 aa11.26□□□□□ -0.61
PRDM1-201ENST00000369089 TBC1D12O60347 775 aa11.26□□□□□ -0.61
PRDM1-201ENST00000369089 GOLGA8HP0CJ92 632 aa11.26□□□□□ -0.61
PRDM1-201ENST00000369089 NFKBIAP25963 317 aa11.26□□□□□ -0.61
PRDM1-201ENST00000369089 CXCR5P32302 372 aa11.26□□□□□ -0.61
PRDM1-201ENST00000369089 LONP1P36776 959 aaKnown RBP11.26□□□□□ -0.61
PRDM1-201ENST00000369089 AMPD3Q01432 767 aa11.26□□□□□ -0.61
PRDM1-201ENST00000369089 ITGA7Q13683 1181 aa11.26□□□□□ -0.61
PRDM1-201ENST00000369089 LRRC8BQ6P9F7 803 aa11.26□□□□□ -0.61
PRDM1-201ENST00000369089 ANKRD35Q8N283 1001 aa11.26□□□□□ -0.61
PRDM1-201ENST00000369089 LRRC1Q9BTT6 524 aa11.26□□□□□ -0.61
PRDM1-201ENST00000369089 KDM5CP41229 1560 aa11.26□□□□□ -0.61
PRDM1-201ENST00000369089 ZCCHC11Q5TAX3 1644 aaKnown RBP11.25□□□□□ -0.61
PRDM1-201ENST00000369089 METAP2P50579 478 aaKnown RBP eCLIP11.25□□□□□ -0.61
PRDM1-201ENST00000369089 LINS1Q8NG48 757 aa11.25□□□□□ -0.61
PRDM1-201ENST00000369089 EPS15L1Q9UBC2 864 aa11.25□□□□□ -0.61
PRDM1-201ENST00000369089 ZNF24P17028 368 aa11.25□□□□□ -0.61
PRDM1-201ENST00000369089 EIF4BP23588 611 aaKnown RBP11.25□□□□□ -0.61
PRDM1-201ENST00000369089 TCP11L1Q9NUJ3 509 aa11.25□□□□□ -0.61
PRDM1-201ENST00000369089 ATAD3AQ9NVI7 634 aa11.25□□□□□ -0.61
PRDM1-201ENST00000369089 ERVK-7P63135 1459 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms