RNA–Protein interactions for RNA: ENST00000368843.7

SNX27-203, Transcript of sorting nexin family member 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNX27, Length 7,197 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-203ENST00000368843 CUEDC2Q9H467 287 aa19.44■□□□□ 0.7
SNX27-203ENST00000368843 ABCC12Q96J65 1359 aa19.44■□□□□ 0.7
SNX27-203ENST00000368843 MUM1Q2TAK8 710 aa19.44■□□□□ 0.7
SNX27-203ENST00000368843 ARHGEF18Q6ZSZ5 1173 aa19.44■□□□□ 0.7
SNX27-203ENST00000368843 PDZD8Q8NEN9 1154 aa19.44■□□□□ 0.7
SNX27-203ENST00000368843 SDCCAG3Q96C92 435 aa19.44■□□□□ 0.7
SNX27-203ENST00000368843 RNF26Q9BY78 433 aaPredicted RBP19.44■□□□□ 0.7
SNX27-203ENST00000368843 GCNT4Q9P109 453 aa19.44■□□□□ 0.7
SNX27-203ENST00000368843 CPSF2Q9P2I0 782 aaKnown RBP19.44■□□□□ 0.7
SNX27-203ENST00000368843 GOLGA8KD6RF30 607 aa19.43■□□□□ 0.7
SNX27-203ENST00000368843 RBM6P78332 1123 aaKnown RBP19.43■□□□□ 0.7
SNX27-203ENST00000368843 GRAPQ13588 217 aa19.43■□□□□ 0.7
SNX27-203ENST00000368843 GRAPLQ8TC17 118 aaPredicted RBP19.43■□□□□ 0.7
SNX27-203ENST00000368843 LRRC8CQ8TDW0 803 aa19.43■□□□□ 0.7
SNX27-203ENST00000368843 AK8Q96MA6 479 aa19.43■□□□□ 0.7
SNX27-203ENST00000368843 COG7P83436 770 aa19.43■□□□□ 0.7
SNX27-203ENST00000368843 ELMSAN1Q6PJG2 1045 aa19.43■□□□□ 0.7
SNX27-203ENST00000368843 SUDS3Q9H7L9 328 aaPredicted RBP19.43■□□□□ 0.7
SNX27-203ENST00000368843 ARHGEF37A1IGU5 675 aa19.43■□□□□ 0.7
SNX27-203ENST00000368843 GNGT1P63211 74 aa19.43■□□□□ 0.7
SNX27-203ENST00000368843 DNAJC24Q6P3W2 148 aa19.43■□□□□ 0.7
SNX27-203ENST00000368843 NVLO15381 856 aaKnown RBP19.43■□□□□ 0.7
SNX27-203ENST00000368843 SMIM24O75264 130 aa19.43■□□□□ 0.7
SNX27-203ENST00000368843 MMP10P09238 476 aa19.43■□□□□ 0.7
SNX27-203ENST00000368843 LMNB2Q03252 620 aa19.43■□□□□ 0.7
SNX27-203ENST00000368843 ZNF589Q86UQ0 364 aaPredicted RBP19.43■□□□□ 0.7
SNX27-203ENST00000368843 RUNDC3BQ96NL0 473 aa19.43■□□□□ 0.7
SNX27-203ENST00000368843 COPRSQ9NQ92 184 aa19.43■□□□□ 0.7
SNX27-203ENST00000368843 ALKBH8Q96BT7 664 aaKnown RBP19.43■□□□□ 0.7
SNX27-203ENST00000368843 CFAP36Q96G28 342 aa19.43■□□□□ 0.7
SNX27-203ENST00000368843 MASTLQ96GX5 879 aa19.43■□□□□ 0.7
SNX27-203ENST00000368843 GFPT2O94808 682 aa19.42■□□□□ 0.7
SNX27-203ENST00000368843 KDM5CP41229 1560 aa19.42■□□□□ 0.7
SNX27-203ENST00000368843 C1orf228Q6PIY5 440 aa19.42■□□□□ 0.7
SNX27-203ENST00000368843 MAGOHBQ96A72 148 aaKnown RBP19.42■□□□□ 0.7
SNX27-203ENST00000368843 LSG1Q9H089 658 aaKnown RBP19.42■□□□□ 0.7
SNX27-203ENST00000368843 STK17AQ9UEE5 414 aa19.42■□□□□ 0.7
SNX27-203ENST00000368843 ASPHQ12797 758 aa19.42■□□□□ 0.7
SNX27-203ENST00000368843 CTTNQ14247 550 aaKnown RBP19.42■□□□□ 0.7
SNX27-203ENST00000368843 TBRG4Q969Z0 631 aaKnown RBP eCLIP19.42■□□□□ 0.7
SNX27-203ENST00000368843 CALN1Q9BXU9 219 aa19.42■□□□□ 0.7
SNX27-203ENST00000368843 WDR64B1ANS9 1081 aa19.42■□□□□ 0.7
SNX27-203ENST00000368843 MX2P20592 715 aa19.42■□□□□ 0.7
SNX27-203ENST00000368843 RNF207Q6ZRF8 634 aa19.42■□□□□ 0.7
SNX27-203ENST00000368843 PIM2Q9P1W9 311 aa19.42■□□□□ 0.7
SNX27-203ENST00000368843 USH1CQ9Y6N9 552 aa19.42■□□□□ 0.7
SNX27-203ENST00000368843 GCFC2P16383 781 aaKnown RBP19.42■□□□□ 0.7
SNX27-203ENST00000368843 APOA5Q6Q788 366 aa19.42■□□□□ 0.7
SNX27-203ENST00000368843 GPC4O75487 556 aa19.42■□□□□ 0.7
SNX27-203ENST00000368843 GNL1P36915 607 aaPredicted RBP19.42■□□□□ 0.7
SNX27-203ENST00000368843 PI16Q6UXB8 463 aa19.42■□□□□ 0.7
SNX27-203ENST00000368843 RMDN2Q96LZ7 410 aa19.42■□□□□ 0.7
SNX27-203ENST00000368843 VCX3AQ9NNX9 186 aa19.42■□□□□ 0.7
SNX27-203ENST00000368843 EPN1Q9Y6I3 576 aaPredicted RBP19.42■□□□□ 0.7
SNX27-203ENST00000368843 GOLGA8IPA6NC78 632 aa19.42■□□□□ 0.7
SNX27-203ENST00000368843 GOLGA8JA6NMD2 632 aa19.42■□□□□ 0.7
SNX27-203ENST00000368843 GUCY2DQ02846 1103 aa19.42■□□□□ 0.7
SNX27-203ENST00000368843 HP1BP3Q5SSJ5 553 aaPredicted RBP19.42■□□□□ 0.7
SNX27-203ENST00000368843 FAM160B2Q86V87 743 aa19.42■□□□□ 0.7
SNX27-203ENST00000368843 P2RX5Q93086 422 aa19.42■□□□□ 0.7
SNX27-203ENST00000368843 SPDL1Q96EA4 605 aa19.42■□□□□ 0.7
SNX27-203ENST00000368843 SERPINB6P35237 376 aa19.41■□□□□ 0.7
SNX27-203ENST00000368843 GRAMD1CQ8IYS0 662 aa19.41■□□□□ 0.7
SNX27-203ENST00000368843 TCP1P17987 556 aaKnown RBP19.41■□□□□ 0.7
SNX27-203ENST00000368843 ABCD1P33897 745 aa19.41■□□□□ 0.7
SNX27-203ENST00000368843 SOX5P35711 763 aa19.41■□□□□ 0.7
SNX27-203ENST00000368843 PUS7LQ9H0K6 701 aaKnown RBP19.41■□□□□ 0.7
SNX27-203ENST00000368843 TPX2Q9ULW0 747 aaKnown RBP19.41■□□□□ 0.7
SNX27-203ENST00000368843 ZNF18P17022 549 aa19.41■□□□□ 0.7
SNX27-203ENST00000368843 CASP14P31944 242 aa19.41■□□□□ 0.7
SNX27-203ENST00000368843 CDK8P49336 464 aa19.41■□□□□ 0.7
SNX27-203ENST00000368843 MSTO1Q9BUK6 570 aa19.41■□□□□ 0.7
SNX27-203ENST00000368843 KDM5DQ9BY66 1539 aa19.41■□□□□ 0.7
SNX27-203ENST00000368843 PPP6R2O75170 966 aa19.41■□□□□ 0.7
SNX27-203ENST00000368843 IRX4P78413 519 aa19.41■□□□□ 0.7
SNX27-203ENST00000368843 NFX1Q12986 1120 aaKnown RBP19.41■□□□□ 0.7
SNX27-203ENST00000368843 ADCK5Q3MIX3 580 aa19.41■□□□□ 0.7
SNX27-203ENST00000368843 CCDC38Q502W7 563 aa19.41■□□□□ 0.7
SNX27-203ENST00000368843 SGO2Q562F6 1265 aa19.41■□□□□ 0.7
SNX27-203ENST00000368843 RNF217Q8TC41 542 aa19.41■□□□□ 0.7
SNX27-203ENST00000368843 PARVGQ9HBI0 331 aa19.41■□□□□ 0.7
SNX27-203ENST00000368843 MOSPD1Q9UJG1 213 aa19.41■□□□□ 0.7
SNX27-203ENST00000368843 A0A087WWV3 80 aa19.41■□□□□ 0.7
SNX27-203ENST00000368843 RWDD4Q6NW29 188 aaKnown RBP19.41■□□□□ 0.7
SNX27-203ENST00000368843 FAM133AQ8N9E0 248 aa19.41■□□□□ 0.7
SNX27-203ENST00000368843 HSPH1Q92598 858 aa19.41■□□□□ 0.7
SNX27-203ENST00000368843 INPP5FQ9Y2H2 1132 aa19.4■□□□□ 0.7
SNX27-203ENST00000368843 CXorf38Q8TB03 319 aa19.4■□□□□ 0.7
SNX27-203ENST00000368843 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.4■□□□□ 0.7
SNX27-203ENST00000368843 PRPSAP2O60256 369 aa19.4■□□□□ 0.7
SNX27-203ENST00000368843 TRAPPC10P48553 1259 aa19.4■□□□□ 0.7
SNX27-203ENST00000368843 CACNB3P54284 484 aa19.4■□□□□ 0.7
SNX27-203ENST00000368843 CDO1Q16878 200 aa19.4■□□□□ 0.7
SNX27-203ENST00000368843 CAPN7Q9Y6W3 813 aa19.4■□□□□ 0.7
SNX27-203ENST00000368843 ZMYND10O75800 440 aa19.4■□□□□ 0.7
SNX27-203ENST00000368843 EEF1GP26641 437 aaKnown RBP19.4■□□□□ 0.7
SNX27-203ENST00000368843 BASP1P80723 227 aaKnown RBP19.4■□□□□ 0.7
SNX27-203ENST00000368843 PSPC1Q8WXF1 523 aaKnown RBP19.4■□□□□ 0.7
SNX27-203ENST00000368843 GPR108Q9NPR9 543 aa19.4■□□□□ 0.7
SNX27-203ENST00000368843 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.4■□□□□ 0.72e-7■□□□□ 9.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms