RNA–Protein interactions for RNA: ENST00000368690.7

CHTOP-203, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CHTOP, Length 2,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-203ENST00000368690 SEMA6BQ9H3T3 888 aa19.18■□□□□ 0.66
CHTOP-203ENST00000368690 TAF1DQ9H5J8 278 aaPredicted RBP19.18■□□□□ 0.66
CHTOP-203ENST00000368690 FAM207AQ9NSI2 230 aaPredicted RBP19.18■□□□□ 0.66
CHTOP-203ENST00000368690 TCP11L1Q9NUJ3 509 aa19.18■□□□□ 0.66
CHTOP-203ENST00000368690 PCDHGC5Q9Y5F6 944 aa19.18■□□□□ 0.66
CHTOP-203ENST00000368690 TRAPPC3O43617 180 aa19.17■□□□□ 0.66
CHTOP-203ENST00000368690 PLCG1P19174 1290 aa19.17■□□□□ 0.66
CHTOP-203ENST00000368690 NF2P35240 595 aa19.17■□□□□ 0.66
CHTOP-203ENST00000368690 ASIC1P78348 528 aa19.17■□□□□ 0.66
CHTOP-203ENST00000368690 RASSF7Q02833 373 aa19.17■□□□□ 0.66
CHTOP-203ENST00000368690 NAB2Q15742 525 aa19.17■□□□□ 0.66
CHTOP-203ENST00000368690 SNCBQ16143 134 aa19.17■□□□□ 0.66
CHTOP-203ENST00000368690 SLC15A2Q16348 729 aa19.17■□□□□ 0.66
CHTOP-203ENST00000368690 LACTB2Q53H82 288 aaPredicted RBP19.17■□□□□ 0.66
CHTOP-203ENST00000368690 CCDC178Q5BJE1 867 aa19.17■□□□□ 0.66
CHTOP-203ENST00000368690 RUFY4Q6ZNE9 571 aa19.17■□□□□ 0.66
CHTOP-203ENST00000368690 CABP7Q86V35 215 aa19.17■□□□□ 0.66
CHTOP-203ENST00000368690 LRRC45Q96CN5 670 aa19.17■□□□□ 0.66
CHTOP-203ENST00000368690 SLC12A6Q9UHW9 1150 aa19.17■□□□□ 0.66
CHTOP-203ENST00000368690 TMEM59LQ9UK28 342 aa19.17■□□□□ 0.66
CHTOP-203ENST00000368690 MINPP1Q9UNW1 487 aa19.17■□□□□ 0.66
CHTOP-203ENST00000368690 GCOM1H8Y6P7 765 aaPredicted RBP19.17■□□□□ 0.66
CHTOP-203ENST00000368690 MYZAPP0CAP1 466 aa19.17■□□□□ 0.66
CHTOP-203ENST00000368690 MEI1Q5TIA1 1274 aa19.17■□□□□ 0.66
CHTOP-203ENST00000368690 MMRN2Q9H8L6 949 aa19.17■□□□□ 0.66
CHTOP-203ENST00000368690 A0A1B0GUL6 1792 aa19.17■□□□□ 0.66
CHTOP-203ENST00000368690 LAMB1P07942 1786 aa19.17■□□□□ 0.66
CHTOP-203ENST00000368690 BHMG1C9JSJ3 638 aaPredicted RBP19.16■□□□□ 0.66
CHTOP-203ENST00000368690 MMP10P09238 476 aa19.16■□□□□ 0.66
CHTOP-203ENST00000368690 SLC1A4P43007 532 aa19.16■□□□□ 0.66
CHTOP-203ENST00000368690 AGBL2Q5U5Z8 902 aa19.16■□□□□ 0.66
CHTOP-203ENST00000368690 HGSNATQ68CP4 663 aa19.16■□□□□ 0.66
CHTOP-203ENST00000368690 PARP9Q8IXQ6 854 aa19.16■□□□□ 0.66
CHTOP-203ENST00000368690 KIAA0895Q8NCT3 520 aa19.16■□□□□ 0.66
CHTOP-203ENST00000368690 SGSM3Q96HU1 749 aa19.16■□□□□ 0.66
CHTOP-203ENST00000368690 CCDC114Q96M63 670 aa19.16■□□□□ 0.66
CHTOP-203ENST00000368690 ZNF804BA4D1E1 1349 aa19.16■□□□□ 0.66
CHTOP-203ENST00000368690 H0YGN5 161 aa19.16■□□□□ 0.66
CHTOP-203ENST00000368690 SMIM22K7EJ46 135 aa19.16■□□□□ 0.66
CHTOP-203ENST00000368690 GUCY2FP51841 1108 aa19.16■□□□□ 0.66
CHTOP-203ENST00000368690 LRRC63Q05C16 580 aa19.16■□□□□ 0.66
CHTOP-203ENST00000368690 MAATS1Q7Z4T9 603 aa19.16■□□□□ 0.66
CHTOP-203ENST00000368690 KRT12Q99456 494 aa19.16■□□□□ 0.66
CHTOP-203ENST00000368690 DDX20Q9UHI6 824 aaKnown RBP19.16■□□□□ 0.66
CHTOP-203ENST00000368690 PCDHA6Q9UN73 950 aa19.16■□□□□ 0.66
CHTOP-203ENST00000368690 PCDHA8Q9Y5H6 950 aa19.16■□□□□ 0.66
CHTOP-203ENST00000368690 NFS1Q9Y697 457 aa19.16■□□□□ 0.66
CHTOP-203ENST00000368690 PVALEFA0A1B0GWK0 134 aa19.15■□□□□ 0.66
CHTOP-203ENST00000368690 ESYT3A0FGR9 886 aa19.15■□□□□ 0.66
CHTOP-203ENST00000368690 SERPING1P05155 500 aa19.15■□□□□ 0.66
CHTOP-203ENST00000368690 FCER1AP12319 257 aa19.15■□□□□ 0.66
CHTOP-203ENST00000368690 VEGFAP15692 232 aaPredicted RBP19.15■□□□□ 0.66
CHTOP-203ENST00000368690 GFPT1Q06210 699 aaPredicted RBP19.15■□□□□ 0.66
CHTOP-203ENST00000368690 SLC9C1Q4G0N8 1177 aa19.15■□□□□ 0.66
CHTOP-203ENST00000368690 CYB5D1Q6P9G0 228 aa19.15■□□□□ 0.66
CHTOP-203ENST00000368690 FUKQ8N0W3 1084 aa19.15■□□□□ 0.66
CHTOP-203ENST00000368690 USP38Q8NB14 1042 aa19.15■□□□□ 0.66
CHTOP-203ENST00000368690 VEZTQ9HBM0 779 aa19.15■□□□□ 0.66
CHTOP-203ENST00000368690 ODF2LQ9ULJ1 636 aa19.15■□□□□ 0.66
CHTOP-203ENST00000368690 BAZ2BQ9UIF8 2168 aaKnown RBP19.15■□□□□ 0.66
CHTOP-203ENST00000368690 ZSCAN5CA6NGD5 496 aaPredicted RBP19.15■□□□□ 0.66
CHTOP-203ENST00000368690 WTIPA6NIX2 430 aaPredicted RBP19.15■□□□□ 0.66
CHTOP-203ENST00000368690 BTNL10A8MVZ5 291 aa19.15■□□□□ 0.66
CHTOP-203ENST00000368690 GHRP10912 638 aa19.15■□□□□ 0.66
CHTOP-203ENST00000368690 SLC8A1P32418 973 aa19.15■□□□□ 0.66
CHTOP-203ENST00000368690 ANKRD20A8PQ5CZ79 823 aa19.15■□□□□ 0.66
CHTOP-203ENST00000368690 GUF1Q8N442 669 aaKnown RBP19.15■□□□□ 0.66
CHTOP-203ENST00000368690 CEP72Q9P209 647 aa19.15■□□□□ 0.66
CHTOP-203ENST00000368690 BUB1O43683 1085 aa19.14■□□□□ 0.65
CHTOP-203ENST00000368690 PALMO75781 387 aa19.14■□□□□ 0.65
CHTOP-203ENST00000368690 GNAQP50148 359 aa19.14■□□□□ 0.65
CHTOP-203ENST00000368690 XRCC4Q13426 336 aa19.14■□□□□ 0.65
CHTOP-203ENST00000368690 MTMR3Q13615 1198 aa19.14■□□□□ 0.65
CHTOP-203ENST00000368690 EEF2KMTQ96G04 330 aa19.14■□□□□ 0.65
CHTOP-203ENST00000368690 RAD51CO43502 376 aa19.13■□□□□ 0.65
CHTOP-203ENST00000368690 HSD17B3P37058 310 aa19.13■□□□□ 0.65
CHTOP-203ENST00000368690 GRAPQ13588 217 aa19.13■□□□□ 0.65
CHTOP-203ENST00000368690 NBPF9Q3BBW0 867 aa19.13■□□□□ 0.65
CHTOP-203ENST00000368690 CACNA2D4Q7Z3S7 1137 aa19.13■□□□□ 0.65
CHTOP-203ENST00000368690 ANKRD13CQ8N6S4 541 aa19.13■□□□□ 0.65
CHTOP-203ENST00000368690 GRAPLQ8TC17 118 aaPredicted RBP19.13■□□□□ 0.65
CHTOP-203ENST00000368690 MIEF2Q96C03 454 aa19.13■□□□□ 0.65
CHTOP-203ENST00000368690 PLIN2Q99541 437 aa19.13■□□□□ 0.65
CHTOP-203ENST00000368690 OSBPL7Q9BZF2 842 aa19.13■□□□□ 0.65
CHTOP-203ENST00000368690 CYP2D7A0A087X1C5 515 aa19.13■□□□□ 0.65
CHTOP-203ENST00000368690 NKRFO15226 690 aaKnown RBP eCLIP19.13■□□□□ 0.65
CHTOP-203ENST00000368690 OR52Z1P0C646 297 aa19.13■□□□□ 0.65
CHTOP-203ENST00000368690 GCFC2P16383 781 aaKnown RBP19.13■□□□□ 0.65
CHTOP-203ENST00000368690 ORC2Q13416 577 aaPredicted RBP19.13■□□□□ 0.65
CHTOP-203ENST00000368690 BANK1Q8NDB2 785 aa19.13■□□□□ 0.65
CHTOP-203ENST00000368690 CALR3Q96L12 384 aaKnown RBP19.13■□□□□ 0.65
CHTOP-203ENST00000368690 PPANQ9NQ55 473 aaKnown RBP19.13■□□□□ 0.65
CHTOP-203ENST00000368690 DNAJC8O75937 253 aaPredicted RBP19.12■□□□□ 0.65
CHTOP-203ENST00000368690 ECHS1P30084 290 aa19.12■□□□□ 0.65
CHTOP-203ENST00000368690 UNC13DQ70J99 1090 aa19.12■□□□□ 0.65
CHTOP-203ENST00000368690 CACNA2D3Q8IZS8 1091 aa19.12■□□□□ 0.65
CHTOP-203ENST00000368690 ZNF622Q969S3 477 aaKnown RBP eCLIP19.12■□□□□ 0.65
CHTOP-203ENST00000368690 RBM17Q96I25 401 aaKnown RBP19.12■□□□□ 0.65
CHTOP-203ENST00000368690 PBKQ96KB5 322 aa19.12■□□□□ 0.65
CHTOP-203ENST00000368690 KDM4CQ9H3R0 1056 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms