RNA–Protein interactions for RNA: ENST00000368527.7

TPM3-209, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-209ENST00000368527 CCDC66A2RUB6 948 aa11.3□□□□□ -0.6
TPM3-209ENST00000368527 TRAF5O00463 557 aa11.3□□□□□ -0.6
TPM3-209ENST00000368527 SLC16A3O15427 465 aaKnown RBP11.3□□□□□ -0.6
TPM3-209ENST00000368527 CALUO43852 315 aaPredicted RBP11.3□□□□□ -0.6
TPM3-209ENST00000368527 EDIL3O43854 480 aa11.3□□□□□ -0.6
TPM3-209ENST00000368527 COBLO75128 1261 aa11.3□□□□□ -0.6
TPM3-209ENST00000368527 HERVK_113P62684 666 aa11.3□□□□□ -0.6
TPM3-209ENST00000368527 NFIAQ12857 509 aa11.3□□□□□ -0.6
TPM3-209ENST00000368527 LONRF2Q1L5Z9 754 aa11.3□□□□□ -0.6
TPM3-209ENST00000368527 HERC4Q5GLZ8 1057 aaPredicted RBP11.3□□□□□ -0.6
TPM3-209ENST00000368527 TTBK2Q6IQ55 1244 aa11.3□□□□□ -0.6
TPM3-209ENST00000368527 PDXDC1Q6P996 788 aa11.3□□□□□ -0.6
TPM3-209ENST00000368527 ZNF572Q7Z3I7 529 aaPredicted RBP11.3□□□□□ -0.6
TPM3-209ENST00000368527 FRMD5Q7Z6J6 570 aa11.3□□□□□ -0.6
TPM3-209ENST00000368527 FAM160B2Q86V87 743 aa11.3□□□□□ -0.6
TPM3-209ENST00000368527 GPBP1Q86WP2 473 aa11.3□□□□□ -0.6
TPM3-209ENST00000368527 SYT2Q8N9I0 419 aaPredicted RBP11.3□□□□□ -0.6
TPM3-209ENST00000368527 LRRN4CLQ8ND94 238 aa11.3□□□□□ -0.6
TPM3-209ENST00000368527 ETNPPLQ8TBG4 499 aa11.3□□□□□ -0.6
TPM3-209ENST00000368527 CHURC1Q8WUH1 139 aa11.3□□□□□ -0.6
TPM3-209ENST00000368527 IFIH1Q9BYX4 1025 aaKnown RBP11.3□□□□□ -0.6
TPM3-209ENST00000368527 UBXN6Q9BZV1 441 aa11.3□□□□□ -0.6
TPM3-209ENST00000368527 MMRN2Q9H8L6 949 aa11.3□□□□□ -0.6
TPM3-209ENST00000368527 VIPAS39Q9H9C1 493 aa11.3□□□□□ -0.6
TPM3-209ENST00000368527 TUFT1Q9NNX1 390 aa11.3□□□□□ -0.6
TPM3-209ENST00000368527 KCND2Q9NZV8 630 aa11.3□□□□□ -0.6
TPM3-209ENST00000368527 SEL1LQ9UBV2 794 aa11.3□□□□□ -0.6
TPM3-209ENST00000368527 KIAA1024Q9UPX6 916 aa11.3□□□□□ -0.6
TPM3-209ENST00000368527 TRAF3IP3Q9Y228 551 aa11.3□□□□□ -0.6
TPM3-209ENST00000368527 MYH4Q9Y623 1939 aa11.3□□□□□ -0.6
TPM3-209ENST00000368527 COL11A2P13942 1736 aaPredicted RBP11.29□□□□□ -0.6
TPM3-209ENST00000368527 RASSF10A6NK89 507 aa11.29□□□□□ -0.6
TPM3-209ENST00000368527 RBAK-RBAKDNI3L0D1 243 aa11.29□□□□□ -0.6
TPM3-209ENST00000368527 PDXKO00764 312 aa11.29□□□□□ -0.6
TPM3-209ENST00000368527 MAP2K7O14733 419 aa11.29□□□□□ -0.6
TPM3-209ENST00000368527 MEIS2O14770 477 aa11.29□□□□□ -0.6
TPM3-209ENST00000368527 AKR1B10O60218 316 aa11.29□□□□□ -0.6
TPM3-209ENST00000368527 CLSTN1O94985 981 aa11.29□□□□□ -0.6
TPM3-209ENST00000368527 TBC1D8O95759 1140 aa11.29□□□□□ -0.6
TPM3-209ENST00000368527 APBA3O96018 575 aa11.29□□□□□ -0.6
TPM3-209ENST00000368527 SERPING1P05155 500 aa11.29□□□□□ -0.6
TPM3-209ENST00000368527 CYP11B2P19099 503 aa11.29□□□□□ -0.6
TPM3-209ENST00000368527 SLC16A2P36021 539 aa11.29□□□□□ -0.6
TPM3-209ENST00000368527 EPS15P42566 896 aa11.29□□□□□ -0.6
TPM3-209ENST00000368527 IKQ13123 557 aaPredicted RBP11.29□□□□□ -0.6
TPM3-209ENST00000368527 SLC15A2Q16348 729 aa11.29□□□□□ -0.6
TPM3-209ENST00000368527 NFIL3Q16649 462 aa11.29□□□□□ -0.6
TPM3-209ENST00000368527 IFI16Q16666 785 aaKnown RBP11.29□□□□□ -0.6
TPM3-209ENST00000368527 BMT2Q1RMZ1 405 aa11.29□□□□□ -0.6
TPM3-209ENST00000368527 SLC51AQ86UW1 340 aa11.29□□□□□ -0.6
TPM3-209ENST00000368527 KIAA0825Q8IV33 1275 aa11.29□□□□□ -0.6
TPM3-209ENST00000368527 TRIM59Q8IWR1 403 aa11.29□□□□□ -0.6
TPM3-209ENST00000368527 SAMD3Q8N6K7 520 aa11.29□□□□□ -0.6
TPM3-209ENST00000368527 NEK9Q8TD19 979 aa11.29□□□□□ -0.6
TPM3-209ENST00000368527 FUT8Q9BYC5 575 aa11.29□□□□□ -0.6
TPM3-209ENST00000368527 IRX2Q9BZI1 471 aaPredicted RBP11.29□□□□□ -0.6
TPM3-209ENST00000368527 TANGO6Q9C0B7 1094 aa11.29□□□□□ -0.6
TPM3-209ENST00000368527 ZMYND15Q9H091 742 aa11.29□□□□□ -0.6
TPM3-209ENST00000368527 DNAJC18Q9H819 358 aa11.29□□□□□ -0.6
TPM3-209ENST00000368527 KCNQ5Q9NR82 932 aa11.29□□□□□ -0.6
TPM3-209ENST00000368527 EMILIN3Q9NT22 766 aa11.29□□□□□ -0.6
TPM3-209ENST00000368527 GINM1Q9NU53 330 aa11.29□□□□□ -0.6
TPM3-209ENST00000368527 AGPAT5Q9NUQ2 364 aa11.29□□□□□ -0.6
TPM3-209ENST00000368527 PCDHA13Q9Y5I0 950 aa11.29□□□□□ -0.6
TPM3-209ENST00000368527 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.29□□□□□ -0.6
TPM3-209ENST00000368527 SRCAPQ6ZRS2 3230 aa11.28□□□□□ -0.6
TPM3-209ENST00000368527 BRWD3Q6RI45 1802 aa11.28□□□□□ -0.6
TPM3-209ENST00000368527 DDTLA6NHG4 134 aaPredicted RBP11.28□□□□□ -0.6
TPM3-209ENST00000368527 EIF3DO15371 548 aaKnown RBP eCLIP11.28□□□□□ -0.6
TPM3-209ENST00000368527 PPP1R12BO60237 982 aaPredicted RBP11.28□□□□□ -0.6
TPM3-209ENST00000368527 TBC1D12O60347 775 aa11.28□□□□□ -0.6
TPM3-209ENST00000368527 GFPT2O94808 682 aa11.28□□□□□ -0.6
TPM3-209ENST00000368527 NDUFB10O96000 172 aa11.28□□□□□ -0.6
TPM3-209ENST00000368527 MYCNP04198 464 aaPredicted RBP11.28□□□□□ -0.6
TPM3-209ENST00000368527 SSBP05455 408 aaKnown RBP eCLIP11.28□□□□□ -0.6
TPM3-209ENST00000368527 PLA2G4AP47712 749 aa11.28□□□□□ -0.6
TPM3-209ENST00000368527 STAT2P52630 851 aa11.28□□□□□ -0.6
TPM3-209ENST00000368527 KIF11P52732 1056 aa11.28□□□□□ -0.6
TPM3-209ENST00000368527 USP14P54578 494 aa11.28□□□□□ -0.6
TPM3-209ENST00000368527 SLC12A3P55017 1021 aa11.28□□□□□ -0.6
TPM3-209ENST00000368527 SETQ01105 290 aaPredicted RBP11.28□□□□□ -0.6
TPM3-209ENST00000368527 SMC1AQ14683 1233 aaKnown RBP11.28□□□□□ -0.6
TPM3-209ENST00000368527 SFMBT2Q5VUG0 894 aa11.28□□□□□ -0.6
TPM3-209ENST00000368527 ZNF771Q7L3S4 317 aaPredicted RBP11.28□□□□□ -0.6
TPM3-209ENST00000368527 KRT26Q7Z3Y9 468 aa11.28□□□□□ -0.6
TPM3-209ENST00000368527 RTKN2Q8IZC4 609 aa11.28□□□□□ -0.6
TPM3-209ENST00000368527 GOLGA5Q8TBA6 731 aa11.28□□□□□ -0.6
TPM3-209ENST00000368527 CAGE1Q8TC20 777 aa11.28□□□□□ -0.6
TPM3-209ENST00000368527 FAM151AQ8WW52 585 aa11.28□□□□□ -0.6
TPM3-209ENST00000368527 PKNOX2Q96KN3 472 aa11.28□□□□□ -0.6
TPM3-209ENST00000368527 NOX5Q96PH1 765 aa11.28□□□□□ -0.6
TPM3-209ENST00000368527 WDR11Q9BZH6 1224 aa11.28□□□□□ -0.6
TPM3-209ENST00000368527 ANKZF1Q9H8Y5 726 aa11.28□□□□□ -0.6
TPM3-209ENST00000368527 DBNDD1Q9H9R9 158 aa11.28□□□□□ -0.6
TPM3-209ENST00000368527 MED4Q9NPJ6 270 aa11.28□□□□□ -0.6
TPM3-209ENST00000368527 PLCB1Q9NQ66 1216 aa11.28□□□□□ -0.6
TPM3-209ENST00000368527 OLFML3Q9NRN5 406 aa11.28□□□□□ -0.6
TPM3-209ENST00000368527 PSD3Q9NYI0 1048 aa11.28□□□□□ -0.6
TPM3-209ENST00000368527 PUF60Q9UHX1 559 aaKnown RBP11.28□□□□□ -0.6
TPM3-209ENST00000368527 FBXL5Q9UKA1 691 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms