RNA–Protein interactions for RNA: ENST00000368406.2

EFNA1-201, Transcript of ephrin A1, humanhuman

TSL 1 (best) BASIC

Gene EFNA1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-201ENST00000368406 ZNF174Q15697 407 aa14.33□□□□□ -0.11
EFNA1-201ENST00000368406 TMEM63BQ5T3F8 832 aa14.33□□□□□ -0.11
EFNA1-201ENST00000368406 GPRASP2Q96D09 838 aa14.33□□□□□ -0.11
EFNA1-201ENST00000368406 JADE2Q9NQC1 790 aa14.33□□□□□ -0.11
EFNA1-201ENST00000368406 DDX41Q9UJV9 622 aaKnown RBP14.33□□□□□ -0.11
EFNA1-201ENST00000368406 UBIAD1Q9Y5Z9 338 aa14.33□□□□□ -0.11
EFNA1-201ENST00000368406 ELP1O95163 1332 aa14.33□□□□□ -0.12
EFNA1-201ENST00000368406 A0A1W2PQ45 241 aaPredicted RBP14.32□□□□□ -0.12
EFNA1-201ENST00000368406 A0A1W2PQY0 241 aa14.32□□□□□ -0.12
EFNA1-201ENST00000368406 FAM86B1E9PN63 330 aa14.32□□□□□ -0.12
EFNA1-201ENST00000368406 CABYRO75952 493 aa14.32□□□□□ -0.12
EFNA1-201ENST00000368406 ARIH2O95376 493 aa14.32□□□□□ -0.12
EFNA1-201ENST00000368406 BAG4O95429 457 aaKnown RBP14.32□□□□□ -0.12
EFNA1-201ENST00000368406 ASGR1P07306 291 aa14.32□□□□□ -0.12
EFNA1-201ENST00000368406 FAM86B2P0C5J1 330 aa14.32□□□□□ -0.12
EFNA1-201ENST00000368406 ITGB5P18084 799 aa14.32□□□□□ -0.12
EFNA1-201ENST00000368406 CPT1AP50416 773 aa14.32□□□□□ -0.12
EFNA1-201ENST00000368406 SNX17Q15036 470 aa14.32□□□□□ -0.12
EFNA1-201ENST00000368406 LRRC26Q2I0M4 334 aa14.32□□□□□ -0.12
EFNA1-201ENST00000368406 BRDTQ58F21 947 aaPredicted RBP14.32□□□□□ -0.12
EFNA1-201ENST00000368406 FAM173BQ6P4H8 233 aa14.32□□□□□ -0.12
EFNA1-201ENST00000368406 MOXD1Q6UVY6 613 aa14.32□□□□□ -0.12
EFNA1-201ENST00000368406 SLC39A5Q6ZMH5 540 aa14.32□□□□□ -0.12
EFNA1-201ENST00000368406 NIPA1Q7RTP0 329 aa14.32□□□□□ -0.12
EFNA1-201ENST00000368406 CRYGNQ8WXF5 182 aa14.32□□□□□ -0.12
EFNA1-201ENST00000368406 INPP4AQ96PE3 977 aaPredicted RBP14.32□□□□□ -0.12
EFNA1-201ENST00000368406 UIMC1Q96RL1 719 aa14.32□□□□□ -0.12
EFNA1-201ENST00000368406 ZNF577Q9BSK1 485 aa14.32□□□□□ -0.12
EFNA1-201ENST00000368406 CEP131Q9UPN4 1083 aa14.32□□□□□ -0.12
EFNA1-201ENST00000368406 CEP290O15078 2479 aa14.32□□□□□ -0.12
EFNA1-201ENST00000368406 A6NJR5 290 aa14.32□□□□□ -0.12
EFNA1-201ENST00000368406 SORBS3O60504 671 aa14.32□□□□□ -0.12
EFNA1-201ENST00000368406 ICAM3P32942 547 aa14.32□□□□□ -0.12
EFNA1-201ENST00000368406 CIITAP33076 1130 aa14.32□□□□□ -0.12
EFNA1-201ENST00000368406 DDIT3P35638 169 aa14.32□□□□□ -0.12
EFNA1-201ENST00000368406 IRX5P78411 483 aaPredicted RBP14.32□□□□□ -0.12
EFNA1-201ENST00000368406 CEBPZQ03701 1054 aaKnown RBP14.32□□□□□ -0.12
EFNA1-201ENST00000368406 CALCRLQ16602 461 aa14.32□□□□□ -0.12
EFNA1-201ENST00000368406 PRPF38BQ5VTL8 546 aaKnown RBP14.32□□□□□ -0.12
EFNA1-201ENST00000368406 PPP4R3AQ6IN85 833 aa14.32□□□□□ -0.12
EFNA1-201ENST00000368406 POTEDQ86YR6 584 aa14.32□□□□□ -0.12
EFNA1-201ENST00000368406 CYP2W1Q8TAV3 490 aa14.32□□□□□ -0.12
EFNA1-201ENST00000368406 EMID1Q96A84 441 aaPredicted RBP14.32□□□□□ -0.12
EFNA1-201ENST00000368406 FERMT2Q96AC1 680 aa14.32□□□□□ -0.12
EFNA1-201ENST00000368406 GLT1D1Q96MS3 346 aa14.32□□□□□ -0.12
EFNA1-201ENST00000368406 SDF4Q9BRK5 362 aa14.32□□□□□ -0.12
EFNA1-201ENST00000368406 KCNH7Q9NS40 1196 aa14.32□□□□□ -0.12
EFNA1-201ENST00000368406 PCDHB6Q9Y5E3 794 aa14.32□□□□□ -0.12
EFNA1-201ENST00000368406 CYP3A7-CYP3A51PA0A087WV96 503 aa14.31□□□□□ -0.12
EFNA1-201ENST00000368406 MEIS1O00470 390 aa14.31□□□□□ -0.12
EFNA1-201ENST00000368406 SLC37A4O43826 429 aa14.31□□□□□ -0.12
EFNA1-201ENST00000368406 KPNA6O60684 536 aa14.31□□□□□ -0.12
EFNA1-201ENST00000368406 GH1P01241 217 aa14.31□□□□□ -0.12
EFNA1-201ENST00000368406 PTGS1P23219 599 aa14.31□□□□□ -0.12
EFNA1-201ENST00000368406 CYP3A7P24462 503 aa14.31□□□□□ -0.12
EFNA1-201ENST00000368406 BEX3Q00994 111 aa14.31□□□□□ -0.12
EFNA1-201ENST00000368406 ORC2Q13416 577 aaPredicted RBP14.31□□□□□ -0.12
EFNA1-201ENST00000368406 LY6KQ17RY6 165 aa14.31□□□□□ -0.12
EFNA1-201ENST00000368406 Q4G0T1 1027 aa14.31□□□□□ -0.12
EFNA1-201ENST00000368406 GIMAP8Q8ND71 665 aaPredicted RBP14.31□□□□□ -0.12
EFNA1-201ENST00000368406 OR6J1Q8NGC5 347 aa14.31□□□□□ -0.12
EFNA1-201ENST00000368406 SEZ6LQ9BYH1 1024 aa14.31□□□□□ -0.12
EFNA1-201ENST00000368406 STARD7Q9NQZ5 370 aa14.31□□□□□ -0.12
EFNA1-201ENST00000368406 ZDHHC9Q9Y397 364 aa14.31□□□□□ -0.12
EFNA1-201ENST00000368406 ALPK3Q96L96 1907 aa14.31□□□□□ -0.12
EFNA1-201ENST00000368406 IGLV3-22A0A075B6J6 115 aa14.3□□□□□ -0.12
EFNA1-201ENST00000368406 SPATA31C2B4DYI2 1134 aa14.3□□□□□ -0.12
EFNA1-201ENST00000368406 DDX39AO00148 427 aaKnown RBP14.3□□□□□ -0.12
EFNA1-201ENST00000368406 IPO5O00410 1097 aaKnown RBP14.3□□□□□ -0.12
EFNA1-201ENST00000368406 MAFGO15525 162 aa14.3□□□□□ -0.12
EFNA1-201ENST00000368406 GAS7O60861 476 aa14.3□□□□□ -0.12
EFNA1-201ENST00000368406 BMP15O95972 392 aa14.3□□□□□ -0.12
EFNA1-201ENST00000368406 ARP10275 920 aa14.3□□□□□ -0.12
EFNA1-201ENST00000368406 TOB1P50616 345 aaPredicted RBP14.3□□□□□ -0.12
EFNA1-201ENST00000368406 ATN1P54259 1190 aaPredicted RBP14.3□□□□□ -0.12
EFNA1-201ENST00000368406 SP4Q02446 784 aa14.3□□□□□ -0.12
EFNA1-201ENST00000368406 ARHGAP1Q07960 439 aa14.3□□□□□ -0.12
EFNA1-201ENST00000368406 LAMC2Q13753 1193 aa14.3□□□□□ -0.12
EFNA1-201ENST00000368406 LRCH2Q5VUJ6 765 aa14.3□□□□□ -0.12
EFNA1-201ENST00000368406 DHX37Q8IY37 1157 aaKnown RBP14.3□□□□□ -0.12
EFNA1-201ENST00000368406 COPS5Q92905 334 aa14.3□□□□□ -0.12
EFNA1-201ENST00000368406 TOX2Q96NM4 488 aa14.3□□□□□ -0.12
EFNA1-201ENST00000368406 DOCK5Q9H7D0 1870 aa14.3□□□□□ -0.12
EFNA1-201ENST00000368406 MLXIPQ9HAP2 919 aa14.3□□□□□ -0.12
EFNA1-201ENST00000368406 AGO4Q9HCK5 861 aaKnown RBP14.3□□□□□ -0.12
EFNA1-201ENST00000368406 POLR3EQ9NVU0 708 aa14.3□□□□□ -0.12
EFNA1-201ENST00000368406 H0YGN5 161 aa14.29□□□□□ -0.12
EFNA1-201ENST00000368406 NOP56O00567 594 aaKnown RBP14.29□□□□□ -0.12
EFNA1-201ENST00000368406 WNT7AO00755 349 aa14.29□□□□□ -0.12
EFNA1-201ENST00000368406 MSH4O15457 936 aa14.29□□□□□ -0.12
EFNA1-201ENST00000368406 GGPS1O95749 300 aa14.29□□□□□ -0.12
EFNA1-201ENST00000368406 OR52Z1P0C646 297 aa14.29□□□□□ -0.12
EFNA1-201ENST00000368406 UBA1P22314 1058 aaKnown RBP14.29□□□□□ -0.12
EFNA1-201ENST00000368406 RTP1P59025 263 aa14.29□□□□□ -0.12
EFNA1-201ENST00000368406 KRT85P78386 507 aa14.29□□□□□ -0.12
EFNA1-201ENST00000368406 SP2Q02086 613 aa14.29□□□□□ -0.12
EFNA1-201ENST00000368406 NEDD9Q14511 834 aa14.29□□□□□ -0.12
EFNA1-201ENST00000368406 STK38Q15208 465 aa14.29□□□□□ -0.12
EFNA1-201ENST00000368406 SF3A1Q15459 793 aaKnown RBP14.29□□□□□ -0.12
EFNA1-201ENST00000368406 TMEM266Q2M3C6 531 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms