RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 ARP10275 920 aa25.59■■□□□ 1.69
ECHDC1-203ENST00000368291 NBPF20Q3BBV1 942 aa25.59■■□□□ 1.69
ECHDC1-203ENST00000368291 CCDC83Q8IWF9 413 aa25.59■■□□□ 1.69
ECHDC1-203ENST00000368291 ZSCAN31Q96LW9 406 aaPredicted RBP25.59■■□□□ 1.69
ECHDC1-203ENST00000368291 GDF15Q99988 308 aa25.59■■□□□ 1.69
ECHDC1-203ENST00000368291 ALG1Q9BT22 464 aa25.59■■□□□ 1.69
ECHDC1-203ENST00000368291 IGLV3-22A0A075B6J6 115 aa25.58■■□□□ 1.69
ECHDC1-203ENST00000368291 PPFIA4O75335 1185 aa25.58■■□□□ 1.69
ECHDC1-203ENST00000368291 CD2BP2O95400 341 aaKnown RBP25.58■■□□□ 1.69
ECHDC1-203ENST00000368291 ITGB8P26012 769 aa25.58■■□□□ 1.69
ECHDC1-203ENST00000368291 GALNT17Q6IS24 598 aa25.58■■□□□ 1.69
ECHDC1-203ENST00000368291 PRDM5Q9NQX1 630 aaPredicted RBP25.58■■□□□ 1.69
ECHDC1-203ENST00000368291 COLQQ9Y215 455 aaPredicted RBP25.58■■□□□ 1.69
ECHDC1-203ENST00000368291 KIAA0355O15063 1070 aa25.57■■□□□ 1.68
ECHDC1-203ENST00000368291 ZNF286BP0CG31 522 aa25.57■■□□□ 1.68
ECHDC1-203ENST00000368291 MAGEA10P43363 369 aaPredicted RBP25.57■■□□□ 1.68
ECHDC1-203ENST00000368291 CHRDL2Q6WN34 429 aa25.57■■□□□ 1.68
ECHDC1-203ENST00000368291 NIPA1Q7RTP0 329 aa25.57■■□□□ 1.68
ECHDC1-203ENST00000368291 GPR20Q99678 358 aa25.57■■□□□ 1.68
ECHDC1-203ENST00000368291 C16orf70Q9BSU1 422 aa25.57■■□□□ 1.68
ECHDC1-203ENST00000368291 SEZ6LQ9BYH1 1024 aa25.57■■□□□ 1.68
ECHDC1-203ENST00000368291 SH2B1Q9NRF2 756 aaPredicted RBP25.57■■□□□ 1.68
ECHDC1-203ENST00000368291 PKD2L1Q9P0L9 805 aa25.57■■□□□ 1.68
ECHDC1-203ENST00000368291 TBX21Q9UL17 535 aa25.57■■□□□ 1.68
ECHDC1-203ENST00000368291 HAS3O00219 553 aa25.56■■□□□ 1.68
ECHDC1-203ENST00000368291 B4GALT4O60513 344 aa25.56■■□□□ 1.68
ECHDC1-203ENST00000368291 F2P00734 622 aa25.56■■□□□ 1.68
ECHDC1-203ENST00000368291 GIMAP8Q8ND71 665 aaPredicted RBP25.56■■□□□ 1.68
ECHDC1-203ENST00000368291 WASF1Q92558 559 aa25.56■■□□□ 1.68
ECHDC1-203ENST00000368291 WDR81Q562E7 1941 aa25.56■■□□□ 1.68
ECHDC1-203ENST00000368291 CIITAP33076 1130 aa25.56■■□□□ 1.68
ECHDC1-203ENST00000368291 ZNF76P36508 570 aa25.56■■□□□ 1.68
ECHDC1-203ENST00000368291 NFRKBQ6P4R8 1299 aa25.56■■□□□ 1.68
ECHDC1-203ENST00000368291 TRPV6Q9H1D0 765 aa25.56■■□□□ 1.68
ECHDC1-203ENST00000368291 AGO4Q9HCK5 861 aaKnown RBP25.56■■□□□ 1.68
ECHDC1-203ENST00000368291 TMEM39AQ9NV64 488 aa25.56■■□□□ 1.68
ECHDC1-203ENST00000368291 PRKAG2Q9UGJ0 569 aa25.56■■□□□ 1.68
ECHDC1-203ENST00000368291 ST18O60284 1047 aa25.55■■□□□ 1.68
ECHDC1-203ENST00000368291 XBP1P17861 261 aa25.55■■□□□ 1.68
ECHDC1-203ENST00000368291 MDM2Q00987 491 aaPredicted RBP25.55■■□□□ 1.68
ECHDC1-203ENST00000368291 ITGB3BPQ13352 177 aaPredicted RBP25.55■■□□□ 1.68
ECHDC1-203ENST00000368291 PLA2G4DQ86XP0 818 aa25.55■■□□□ 1.68
ECHDC1-203ENST00000368291 IL27Q8NEV9 243 aa25.55■■□□□ 1.68
ECHDC1-203ENST00000368291 OXER1Q8TDS5 423 aa25.55■■□□□ 1.68
ECHDC1-203ENST00000368291 TBCKQ8TEA7 893 aa25.55■■□□□ 1.68
ECHDC1-203ENST00000368291 LLPHQ9BRT6 129 aaKnown RBP25.55■■□□□ 1.68
ECHDC1-203ENST00000368291 KAT6AQ92794 2004 aa25.54■■□□□ 1.68
ECHDC1-203ENST00000368291 RANBP2P49792 3224 aaKnown RBP25.54■■□□□ 1.68
ECHDC1-203ENST00000368291 NOP56O00567 594 aaKnown RBP25.54■■□□□ 1.68
ECHDC1-203ENST00000368291 TLR3O15455 904 aaKnown RBP25.54■■□□□ 1.68
ECHDC1-203ENST00000368291 NFASCO94856 1347 aa25.54■■□□□ 1.68
ECHDC1-203ENST00000368291 LGALS2P05162 132 aa25.54■■□□□ 1.68
ECHDC1-203ENST00000368291 PSEN2P49810 448 aa25.54■■□□□ 1.68
ECHDC1-203ENST00000368291 SP4Q02446 784 aa25.54■■□□□ 1.68
ECHDC1-203ENST00000368291 LENG9Q96B70 501 aa25.54■■□□□ 1.68
ECHDC1-203ENST00000368291 TRMT13Q9NUP7 481 aaKnown RBP25.54■■□□□ 1.68
ECHDC1-203ENST00000368291 GSTTP1A0A1W2PQM5 241 aa25.53■■□□□ 1.68
ECHDC1-203ENST00000368291 BMP8BP34820 402 aa25.53■■□□□ 1.68
ECHDC1-203ENST00000368291 USP11P51784 963 aa25.53■■□□□ 1.68
ECHDC1-203ENST00000368291 PTPN11Q06124 597 aaPredicted RBP25.53■■□□□ 1.68
ECHDC1-203ENST00000368291 MFSD10Q14728 455 aa25.53■■□□□ 1.68
ECHDC1-203ENST00000368291 KIAA0753Q2KHM9 967 aa25.53■■□□□ 1.68
ECHDC1-203ENST00000368291 FAM47CQ5HY64 1035 aa25.53■■□□□ 1.68
ECHDC1-203ENST00000368291 SESTD1Q86VW0 696 aa25.53■■□□□ 1.68
ECHDC1-203ENST00000368291 CHMP4BP1P59074 171 aa25.52■■□□□ 1.68
ECHDC1-203ENST00000368291 BADQ92934 168 aa25.52■■□□□ 1.68
ECHDC1-203ENST00000368291 KATNAL1Q9BW62 490 aa25.52■■□□□ 1.68
ECHDC1-203ENST00000368291 DHX15O43143 795 aaKnown RBP25.51■■□□□ 1.67
ECHDC1-203ENST00000368291 KRT25Q7Z3Z0 450 aa25.51■■□□□ 1.67
ECHDC1-203ENST00000368291 TRIM50Q86XT4 487 aa25.51■■□□□ 1.67
ECHDC1-203ENST00000368291 UIMC1Q96RL1 719 aa25.51■■□□□ 1.67
ECHDC1-203ENST00000368291 CTAGE1Q96RT6 745 aa25.51■■□□□ 1.67
ECHDC1-203ENST00000368291 JPH1Q9HDC5 661 aaPredicted RBP25.51■■□□□ 1.67
ECHDC1-203ENST00000368291 HDAC6Q9UBN7 1215 aa25.51■■□□□ 1.67
ECHDC1-203ENST00000368291 SLC9A2Q9UBY0 812 aa25.51■■□□□ 1.67
ECHDC1-203ENST00000368291 TRIOBPQ9H2D6 2365 aa25.5■■□□□ 1.67
ECHDC1-203ENST00000368291 H3BRB1 525 aa25.5■■□□□ 1.67
ECHDC1-203ENST00000368291 TIMP1P01033 207 aa25.5■■□□□ 1.67
ECHDC1-203ENST00000368291 RAG1P15918 1043 aa25.5■■□□□ 1.67
ECHDC1-203ENST00000368291 TCF7P36402 384 aaPredicted RBP25.5■■□□□ 1.67
ECHDC1-203ENST00000368291 FOSBP53539 338 aa25.5■■□□□ 1.67
ECHDC1-203ENST00000368291 NONOQ15233 471 aaKnown RBP eCLIP25.5■■□□□ 1.67
ECHDC1-203ENST00000368291 PRR16Q569H4 304 aa25.5■■□□□ 1.67
ECHDC1-203ENST00000368291 EARS2Q5JPH6 523 aaKnown RBP25.5■■□□□ 1.67
ECHDC1-203ENST00000368291 KRT40Q6A162 431 aa25.5■■□□□ 1.67
ECHDC1-203ENST00000368291 GDF6Q6KF10 455 aaPredicted RBP25.5■■□□□ 1.67
ECHDC1-203ENST00000368291 SEPT1Q8WYJ6 367 aa25.5■■□□□ 1.67
ECHDC1-203ENST00000368291 TNFRSF25Q93038 417 aa25.5■■□□□ 1.67
ECHDC1-203ENST00000368291 TMX3Q96JJ7 454 aa25.5■■□□□ 1.67
ECHDC1-203ENST00000368291 LBHD1Q9BQE6 289 aaPredicted RBP25.5■■□□□ 1.67
ECHDC1-203ENST00000368291 TUT1Q9H6E5 874 aaKnown RBP25.5■■□□□ 1.67
ECHDC1-203ENST00000368291 GTF2IRD1Q9UHL9 959 aa25.5■■□□□ 1.67
ECHDC1-203ENST00000368291 MYH9P35579 1960 aaKnown RBP25.5■■□□□ 1.67
ECHDC1-203ENST00000368291 MMP1P03956 469 aa25.49■■□□□ 1.67
ECHDC1-203ENST00000368291 SETQ01105 290 aaPredicted RBP25.49■■□□□ 1.67
ECHDC1-203ENST00000368291 NR5A1Q13285 461 aa25.49■■□□□ 1.67
ECHDC1-203ENST00000368291 HIC1Q14526 733 aa25.49■■□□□ 1.67
ECHDC1-203ENST00000368291 INF2Q27J81 1249 aa25.49■■□□□ 1.67
ECHDC1-203ENST00000368291 UTP14CQ5TAP6 766 aaKnown RBP25.49■■□□□ 1.67
ECHDC1-203ENST00000368291 SDF4Q9BRK5 362 aa25.49■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms