RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 USP17L6PQ6QN14 398 aa14.02□□□□□ -0.16
PTPRK-207ENST00000368226 POLR3EQ9NVU0 708 aa14.02□□□□□ -0.16
PTPRK-207ENST00000368226 PHBP35232 272 aa14.02□□□□□ -0.16
PTPRK-207ENST00000368226 B4GALNT4Q76KP1 1039 aa14.02□□□□□ -0.16
PTPRK-207ENST00000368226 IQCDQ96DY2 449 aa14.02□□□□□ -0.16
PTPRK-207ENST00000368226 BHMT2Q9H2M3 363 aa14.02□□□□□ -0.16
PTPRK-207ENST00000368226 SPTLC3Q9NUV7 552 aa14.02□□□□□ -0.16
PTPRK-207ENST00000368226 RNF181Q9P0P0 153 aa14.02□□□□□ -0.16
PTPRK-207ENST00000368226 POTEMA6NI47 508 aa14.02□□□□□ -0.17
PTPRK-207ENST00000368226 SOWAHDA6NJG2 315 aa14.02□□□□□ -0.17
PTPRK-207ENST00000368226 CDO1Q16878 200 aa14.02□□□□□ -0.17
PTPRK-207ENST00000368226 ZNF394Q53GI3 561 aa14.02□□□□□ -0.17
PTPRK-207ENST00000368226 ANKRD20A3Q5VUR7 823 aa14.02□□□□□ -0.17
PTPRK-207ENST00000368226 OR6B2Q6IFH4 312 aa14.02□□□□□ -0.17
PTPRK-207ENST00000368226 HAUS1Q96CS2 278 aa14.02□□□□□ -0.17
PTPRK-207ENST00000368226 STRBPQ96SI9 672 aaKnown RBP14.02□□□□□ -0.17
PTPRK-207ENST00000368226 OSBPL3Q9H4L5 887 aa14.02□□□□□ -0.17
PTPRK-207ENST00000368226 ACTN1P12814 892 aa14.02□□□□□ -0.17
PTPRK-207ENST00000368226 GAP43P17677 238 aa14.02□□□□□ -0.17
PTPRK-207ENST00000368226 CHRNA5P30532 468 aa14.02□□□□□ -0.17
PTPRK-207ENST00000368226 KCTD16Q68DU8 428 aa14.02□□□□□ -0.17
PTPRK-207ENST00000368226 HEXIM2Q96MH2 286 aaKnown RBP14.02□□□□□ -0.17
PTPRK-207ENST00000368226 EFCC1Q9HA90 598 aa14.02□□□□□ -0.17
PTPRK-207ENST00000368226 ZNF215Q9UL58 517 aaPredicted RBP14.02□□□□□ -0.17
PTPRK-207ENST00000368226 POLIQ9UNA4 740 aa14.02□□□□□ -0.17
PTPRK-207ENST00000368226 INPP5BP32019 993 aa14.02□□□□□ -0.17
PTPRK-207ENST00000368226 PCK1P35558 622 aa14.02□□□□□ -0.17
PTPRK-207ENST00000368226 C2orf54Q08AI8 447 aa14.02□□□□□ -0.17
PTPRK-207ENST00000368226 THNSL1Q8IYQ7 743 aa14.02□□□□□ -0.17
PTPRK-207ENST00000368226 P3H4Q92791 437 aa14.02□□□□□ -0.17
PTPRK-207ENST00000368226 GSDMAQ96QA5 445 aa14.02□□□□□ -0.17
PTPRK-207ENST00000368226 FEZ2Q9UHY8 353 aaPredicted RBP14.02□□□□□ -0.17
PTPRK-207ENST00000368226 INPP5FQ9Y2H2 1132 aa14.02□□□□□ -0.17
PTPRK-207ENST00000368226 USP17L10C9JJH3 530 aa14.01□□□□□ -0.17
PTPRK-207ENST00000368226 TRAPPC10P48553 1259 aa14.01□□□□□ -0.17
PTPRK-207ENST00000368226 PAGE5Q96GU1 130 aa14.01□□□□□ -0.17
PTPRK-207ENST00000368226 PPP1R13BQ96KQ4 1090 aa14.01□□□□□ -0.17
PTPRK-207ENST00000368226 PARVGQ9HBI0 331 aa14.01□□□□□ -0.17
PTPRK-207ENST00000368226 PNMA2Q9UL42 364 aa14.01□□□□□ -0.17
PTPRK-207ENST00000368226 SCAF8Q9UPN6 1271 aaKnown RBP14.01□□□□□ -0.17
PTPRK-207ENST00000368226 KRT1P04264 644 aa14.01□□□□□ -0.17
PTPRK-207ENST00000368226 SATB1Q01826 763 aa14.01□□□□□ -0.17
PTPRK-207ENST00000368226 PDZD4Q76G19 769 aaPredicted RBP14.01□□□□□ -0.17
PTPRK-207ENST00000368226 BCL2L12Q9HB09 334 aa14.01□□□□□ -0.17
PTPRK-207ENST00000368226 CDK12Q9NYV4 1490 aaPredicted RBP14.01□□□□□ -0.17
PTPRK-207ENST00000368226 SH2D4BQ5SQS7 431 aa14.01□□□□□ -0.17
PTPRK-207ENST00000368226 RAPH1Q70E73 1250 aa14.01□□□□□ -0.17
PTPRK-207ENST00000368226 MYLK4Q86YV6 388 aaPredicted RBP14.01□□□□□ -0.17
PTPRK-207ENST00000368226 AK8Q96MA6 479 aa14.01□□□□□ -0.17
PTPRK-207ENST00000368226 CFAP57Q96MR6 1250 aa14.01□□□□□ -0.17
PTPRK-207ENST00000368226 CCDC68Q9H2F9 335 aa14.01□□□□□ -0.17
PTPRK-207ENST00000368226 CD209Q9NNX6 404 aa14.01□□□□□ -0.17
PTPRK-207ENST00000368226 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.01□□□□□ -0.17
PTPRK-207ENST00000368226 SHROOM2Q13796 1616 aa14.01□□□□□ -0.17
PTPRK-207ENST00000368226 A0A1W2PQ27 194 aa14.01□□□□□ -0.17
PTPRK-207ENST00000368226 A0A1W2PQ64 194 aa14.01□□□□□ -0.17
PTPRK-207ENST00000368226 A0A1W2PQD8 194 aa14.01□□□□□ -0.17
PTPRK-207ENST00000368226 GNGT1P63211 74 aa14.01□□□□□ -0.17
PTPRK-207ENST00000368226 MICAL1Q8TDZ2 1067 aa14.01□□□□□ -0.17
PTPRK-207ENST00000368226 MSTO1Q9BUK6 570 aa14.01□□□□□ -0.17
PTPRK-207ENST00000368226 CALN1Q9BXU9 219 aa14.01□□□□□ -0.17
PTPRK-207ENST00000368226 NARFQ9UHQ1 456 aa14.01□□□□□ -0.17
PTPRK-207ENST00000368226 PCDHA6Q9UN73 950 aa14.01□□□□□ -0.17
PTPRK-207ENST00000368226 PCDHA8Q9Y5H6 950 aa14.01□□□□□ -0.17
PTPRK-207ENST00000368226 PPP4R1Q8TF05 950 aa14.01□□□□□ -0.17
PTPRK-207ENST00000368226 XPOTO43592 962 aaKnown RBP14□□□□□ -0.17
PTPRK-207ENST00000368226 SNRNP48Q6IEG0 339 aaKnown RBP14□□□□□ -0.17
PTPRK-207ENST00000368226 ESYT2A0FGR8 921 aa14□□□□□ -0.17
PTPRK-207ENST00000368226 LMNB1P20700 586 aa14□□□□□ -0.17
PTPRK-207ENST00000368226 TMEM179Q6ZVK1 233 aa14□□□□□ -0.17
PTPRK-207ENST00000368226 CCDC170Q8IYT3 715 aa14□□□□□ -0.17
PTPRK-207ENST00000368226 OTUD5Q96G74 571 aa14□□□□□ -0.17
PTPRK-207ENST00000368226 FIS1Q9Y3D6 152 aa14□□□□□ -0.17
PTPRK-207ENST00000368226 ARHGAP42A6NI28 874 aa14□□□□□ -0.17
PTPRK-207ENST00000368226 GCFC2P16383 781 aaKnown RBP14□□□□□ -0.17
PTPRK-207ENST00000368226 IFNAR1P17181 557 aa14□□□□□ -0.17
PTPRK-207ENST00000368226 XPAP23025 273 aaPredicted RBP14□□□□□ -0.17
PTPRK-207ENST00000368226 PPFIA1Q13136 1202 aa14□□□□□ -0.17
PTPRK-207ENST00000368226 MAGOHBQ96A72 148 aaKnown RBP14□□□□□ -0.17
PTPRK-207ENST00000368226 CPDO75976 1380 aa14□□□□□ -0.17
PTPRK-207ENST00000368226 PTPREP23469 700 aa14□□□□□ -0.17
PTPRK-207ENST00000368226 PARD3BQ8TEW8 1205 aa14□□□□□ -0.17
PTPRK-207ENST00000368226 DHTKD1Q96HY7 919 aaPredicted RBP14□□□□□ -0.17
PTPRK-207ENST00000368226 KIF11P52732 1056 aa13.99□□□□□ -0.17
PTPRK-207ENST00000368226 OXER1Q8TDS5 423 aa13.99□□□□□ -0.17
PTPRK-207ENST00000368226 TMEM47Q9BQJ4 181 aa13.99□□□□□ -0.17
PTPRK-207ENST00000368226 HAUS4Q9H6D7 363 aa13.99□□□□□ -0.17
PTPRK-207ENST00000368226 CYP19A1P11511 503 aaPredicted RBP13.99□□□□□ -0.17
PTPRK-207ENST00000368226 ZNF18P17022 549 aa13.99□□□□□ -0.17
PTPRK-207ENST00000368226 SEC31AO94979 1220 aaKnown RBP13.99□□□□□ -0.17
PTPRK-207ENST00000368226 MTMR1Q13613 665 aa13.99□□□□□ -0.17
PTPRK-207ENST00000368226 FAM160B2Q86V87 743 aa13.99□□□□□ -0.17
PTPRK-207ENST00000368226 HDAC11Q96DB2 347 aa13.99□□□□□ -0.17
PTPRK-207ENST00000368226 CEP95Q96GE4 821 aa13.99□□□□□ -0.17
PTPRK-207ENST00000368226 TACO1Q9BSH4 297 aaKnown RBP13.99□□□□□ -0.17
PTPRK-207ENST00000368226 CUEDC2Q9H467 287 aa13.99□□□□□ -0.17
PTPRK-207ENST00000368226 RPF1Q9H9Y2 349 aaKnown RBP13.99□□□□□ -0.17
PTPRK-207ENST00000368226 MAGEF1Q9HAY2 307 aa13.99□□□□□ -0.17
PTPRK-207ENST00000368226 SLFN14P0C7P3 912 aa13.99□□□□□ -0.17
PTPRK-207ENST00000368226 CASP2P42575 452 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms