RNA–Protein interactions for RNA: ENST00000368012.3

NECTIN4-201, Transcript of nectin cell adhesion molecule 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NECTIN4, Length 3,502 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4-201ENST00000368012 CD248Q9HCU0 757 aa12.12□□□□□ -0.47
NECTIN4-201ENST00000368012 BSDC1Q9NW68 430 aaPredicted RBP12.12□□□□□ -0.47
NECTIN4-201ENST00000368012 CETN3O15182 167 aa12.11□□□□□ -0.47
NECTIN4-201ENST00000368012 EIF3HO15372 352 aaKnown RBP eCLIP12.11□□□□□ -0.47
NECTIN4-201ENST00000368012 PRPF6O94906 941 aaKnown RBP12.11□□□□□ -0.47
NECTIN4-201ENST00000368012 LDHCP07864 332 aa12.11□□□□□ -0.47
NECTIN4-201ENST00000368012 HNRNPH1P31943 449 aaKnown RBP12.11□□□□□ -0.47
NECTIN4-201ENST00000368012 ZNF211Q13398 564 aaPredicted RBP12.11□□□□□ -0.47
NECTIN4-201ENST00000368012 MFSD14BQ5SR56 506 aa12.11□□□□□ -0.47
NECTIN4-201ENST00000368012 MCTP2Q6DN12 878 aa12.11□□□□□ -0.47
NECTIN4-201ENST00000368012 INTS5Q6P9B9 1019 aaKnown RBP12.11□□□□□ -0.47
NECTIN4-201ENST00000368012 GBP6Q6ZN66 633 aa12.11□□□□□ -0.47
NECTIN4-201ENST00000368012 B4GALNT4Q76KP1 1039 aa12.11□□□□□ -0.47
NECTIN4-201ENST00000368012 KCNK18Q7Z418 384 aa12.11□□□□□ -0.47
NECTIN4-201ENST00000368012 PNMA8AQ86V59 439 aaPredicted RBP12.11□□□□□ -0.47
NECTIN4-201ENST00000368012 RPGRQ92834 1020 aaKnown RBP12.11□□□□□ -0.47
NECTIN4-201ENST00000368012 KBTBD4Q9NVX7 518 aa12.11□□□□□ -0.47
NECTIN4-201ENST00000368012 AMACRQ9UHK6 382 aa12.11□□□□□ -0.47
NECTIN4-201ENST00000368012 DDX25Q9UHL0 483 aaKnown RBP12.11□□□□□ -0.47
NECTIN4-201ENST00000368012 MAD2L2Q9UI95 211 aa12.11□□□□□ -0.47
NECTIN4-201ENST00000368012 KIF1AQ12756 1690 aa12.11□□□□□ -0.47
NECTIN4-201ENST00000368012 POTEB3A0JP26 581 aa12.11□□□□□ -0.47
NECTIN4-201ENST00000368012 ANO9A1A5B4 782 aa12.11□□□□□ -0.47
NECTIN4-201ENST00000368012 POTECB2RU33 542 aa12.11□□□□□ -0.47
NECTIN4-201ENST00000368012 UBXN2AP68543 259 aa12.11□□□□□ -0.47
NECTIN4-201ENST00000368012 PRR16Q569H4 304 aa12.11□□□□□ -0.47
NECTIN4-201ENST00000368012 HAUS3Q68CZ6 603 aa12.11□□□□□ -0.47
NECTIN4-201ENST00000368012 POTEBQ6S5H4 581 aa12.11□□□□□ -0.47
NECTIN4-201ENST00000368012 CELF4Q9BZC1 486 aaKnown RBP12.11□□□□□ -0.47
NECTIN4-201ENST00000368012 COL4A3BPQ9Y5P4 624 aa12.11□□□□□ -0.47
NECTIN4-201ENST00000368012 MYH10P35580 1976 aa12.11□□□□□ -0.47
NECTIN4-201ENST00000368012 SPEF2Q9C093 1822 aa12.11□□□□□ -0.47
NECTIN4-201ENST00000368012 VIMP08670 466 aaKnown RBP12.11□□□□□ -0.47
NECTIN4-201ENST00000368012 FKBP3Q00688 224 aaKnown RBP12.11□□□□□ -0.47
NECTIN4-201ENST00000368012 TTMPQ5BVD1 217 aa12.11□□□□□ -0.47
NECTIN4-201ENST00000368012 GJB7Q6PEY0 223 aa12.11□□□□□ -0.47
NECTIN4-201ENST00000368012 DGKHQ86XP1 1220 aa12.11□□□□□ -0.47
NECTIN4-201ENST00000368012 CCDC65Q8IXS2 484 aa12.11□□□□□ -0.47
NECTIN4-201ENST00000368012 CCSER1Q9C0I3 900 aa12.11□□□□□ -0.47
NECTIN4-201ENST00000368012 PLAGL2Q9UPG8 496 aa12.11□□□□□ -0.47
NECTIN4-201ENST00000368012 RAD51CO43502 376 aa12.1□□□□□ -0.47
NECTIN4-201ENST00000368012 GFPT2O94808 682 aa12.1□□□□□ -0.47
NECTIN4-201ENST00000368012 GCNT3O95395 438 aa12.1□□□□□ -0.47
NECTIN4-201ENST00000368012 SLC9A1P19634 815 aa12.1□□□□□ -0.47
NECTIN4-201ENST00000368012 RFC4P35249 363 aa12.1□□□□□ -0.47
NECTIN4-201ENST00000368012 SSR1P43307 286 aaKnown RBP12.1□□□□□ -0.47
NECTIN4-201ENST00000368012 CACNB3P54284 484 aa12.1□□□□□ -0.47
NECTIN4-201ENST00000368012 GTF2IP78347 998 aa12.1□□□□□ -0.47
NECTIN4-201ENST00000368012 HDLBPQ00341 1268 aaKnown RBP12.1□□□□□ -0.47
NECTIN4-201ENST00000368012 KCNB1Q14721 858 aa12.1□□□□□ -0.47
NECTIN4-201ENST00000368012 C12orf60Q5U649 245 aa12.1□□□□□ -0.47
NECTIN4-201ENST00000368012 VPS36Q86VN1 386 aa12.1□□□□□ -0.47
NECTIN4-201ENST00000368012 CTNNBL1Q8WYA6 563 aaPredicted RBP12.1□□□□□ -0.47
NECTIN4-201ENST00000368012 PLCD4Q9BRC7 762 aa12.1□□□□□ -0.47
NECTIN4-201ENST00000368012 TLR10Q9BXR5 811 aa12.1□□□□□ -0.47
NECTIN4-201ENST00000368012 BAIAP2L1Q9UHR4 511 aa12.1□□□□□ -0.47
NECTIN4-201ENST00000368012 ZBTB21Q9ULJ3 1066 aa12.1□□□□□ -0.47
NECTIN4-201ENST00000368012 TRPM3Q9HCF6 1732 aaPredicted RBP12.1□□□□□ -0.47
NECTIN4-201ENST00000368012 DAPK3O43293 454 aa12.1□□□□□ -0.47
NECTIN4-201ENST00000368012 LRRN2O75325 713 aa12.1□□□□□ -0.47
NECTIN4-201ENST00000368012 TAL1P17542 331 aaPredicted RBP12.1□□□□□ -0.47
NECTIN4-201ENST00000368012 NFIXQ14938 502 aa12.1□□□□□ -0.47
NECTIN4-201ENST00000368012 MIIPQ5JXC2 388 aa12.1□□□□□ -0.47
NECTIN4-201ENST00000368012 CCDC91Q7Z6B0 441 aa12.1□□□□□ -0.47
NECTIN4-201ENST00000368012 MRRFQ96E11 262 aaKnown RBP12.1□□□□□ -0.47
NECTIN4-201ENST00000368012 CXorf56Q9H5V9 222 aa12.1□□□□□ -0.47
NECTIN4-201ENST00000368012 VIPAS39Q9H9C1 493 aa12.1□□□□□ -0.47
NECTIN4-201ENST00000368012 MLXIPLQ9NP71 852 aa12.1□□□□□ -0.47
NECTIN4-201ENST00000368012 DNAJC17Q9NVM6 304 aaKnown RBP12.1□□□□□ -0.47
NECTIN4-201ENST00000368012 RTCBQ9Y3I0 505 aaKnown RBP12.1□□□□□ -0.47
NECTIN4-201ENST00000368012 TARSL2A2RTX5 802 aaKnown RBP12.1□□□□□ -0.47
NECTIN4-201ENST00000368012 EIF4E1BA6NMX2 242 aaKnown RBP12.1□□□□□ -0.47
NECTIN4-201ENST00000368012 DHX9Q08211 1270 aaKnown RBP12.1□□□□□ -0.47
NECTIN4-201ENST00000368012 NBPF9Q3BBW0 867 aa12.1□□□□□ -0.47
NECTIN4-201ENST00000368012 BANK1Q8NDB2 785 aa12.1□□□□□ -0.47
NECTIN4-201ENST00000368012 ANAPC4Q9UJX5 808 aa12.1□□□□□ -0.47
NECTIN4-201ENST00000368012 COL5A2P05997 1499 aaPredicted RBP12.09□□□□□ -0.47
NECTIN4-201ENST00000368012 POTEFA5A3E0 1075 aa12.09□□□□□ -0.47
NECTIN4-201ENST00000368012 POTEIP0CG38 1075 aa12.09□□□□□ -0.47
NECTIN4-201ENST00000368012 LSP1P33241 339 aa12.09□□□□□ -0.47
NECTIN4-201ENST00000368012 EMBQ6PCB8 327 aa12.09□□□□□ -0.47
NECTIN4-201ENST00000368012 POTEGQ6S5H5 508 aa12.09□□□□□ -0.47
NECTIN4-201ENST00000368012 POTEEQ6S8J3 1075 aa12.09□□□□□ -0.47
NECTIN4-201ENST00000368012 MDM1Q8TC05 714 aa12.09□□□□□ -0.47
NECTIN4-201ENST00000368012 PAIP2Q9BPZ3 127 aaKnown RBP12.09□□□□□ -0.47
NECTIN4-201ENST00000368012 EP400Q96L91 3159 aa12.09□□□□□ -0.47
NECTIN4-201ENST00000368012 RASSF10A6NK89 507 aa12.09□□□□□ -0.47
NECTIN4-201ENST00000368012 ORC4O43929 436 aa12.09□□□□□ -0.47
NECTIN4-201ENST00000368012 TBCAO75347 108 aaKnown RBP12.09□□□□□ -0.47
NECTIN4-201ENST00000368012 VPS41P49754 854 aa12.09□□□□□ -0.47
NECTIN4-201ENST00000368012 CYP2J2P51589 502 aa12.09□□□□□ -0.47
NECTIN4-201ENST00000368012 GRM4Q14833 912 aa12.09□□□□□ -0.47
NECTIN4-201ENST00000368012 C4orf32Q8N8J7 132 aa12.09□□□□□ -0.47
NECTIN4-201ENST00000368012 CASKIN2Q8WXE0 1202 aa12.09□□□□□ -0.47
NECTIN4-201ENST00000368012 PSTPIP2Q9H939 334 aa12.09□□□□□ -0.47
NECTIN4-201ENST00000368012 EMILIN3Q9NT22 766 aa12.09□□□□□ -0.47
NECTIN4-201ENST00000368012 ARMCX3Q9UH62 379 aaPredicted RBP12.09□□□□□ -0.47
NECTIN4-201ENST00000368012 GJC1P36383 396 aa12.08□□□□□ -0.47
NECTIN4-201ENST00000368012 RCAN1P53805 252 aa12.08□□□□□ -0.47
NECTIN4-201ENST00000368012 PLTPP55058 493 aa12.08□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms