RNA–Protein interactions for RNA: ENST00000367425.8

CFHR3-201, Transcript of complement factor H related 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CFHR3, Length 1,645 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3-201ENST00000367425 NUDT5Q9UKK9 219 aa6.35□□□□□ -1.39
CFHR3-201ENST00000367425 TRAF5O00463 557 aa6.34□□□□□ -1.39
CFHR3-201ENST00000367425 BRINP1O60477 761 aa6.34□□□□□ -1.39
CFHR3-201ENST00000367425 EFEMP2O95967 443 aa6.34□□□□□ -1.39
CFHR3-201ENST00000367425 F2P00734 622 aa6.34□□□□□ -1.39
CFHR3-201ENST00000367425 GLI4P10075 376 aa6.34□□□□□ -1.39
CFHR3-201ENST00000367425 CDK11BP21127 795 aaKnown RBP6.34□□□□□ -1.39
CFHR3-201ENST00000367425 SLC6A11P48066 632 aa6.34□□□□□ -1.39
CFHR3-201ENST00000367425 GALK1P51570 392 aa6.34□□□□□ -1.39
CFHR3-201ENST00000367425 MECP2P51608 486 aaKnown RBP6.34□□□□□ -1.39
CFHR3-201ENST00000367425 HABP4Q5JVS0 413 aaKnown RBP6.34□□□□□ -1.39
CFHR3-201ENST00000367425 STEAP3Q658P3 488 aa6.34□□□□□ -1.39
CFHR3-201ENST00000367425 ARHGAP36Q6ZRI8 547 aa6.34□□□□□ -1.39
CFHR3-201ENST00000367425 OSTM1Q86WC4 334 aa6.34□□□□□ -1.39
CFHR3-201ENST00000367425 NXPE1Q8N323 547 aa6.34□□□□□ -1.39
CFHR3-201ENST00000367425 PRPF38AQ8NAV1 312 aaKnown RBP6.34□□□□□ -1.39
CFHR3-201ENST00000367425 SEC14L1Q92503 715 aa6.34□□□□□ -1.39
CFHR3-201ENST00000367425 SHISA4Q96DD7 197 aa6.34□□□□□ -1.39
CFHR3-201ENST00000367425 RNF32Q9H0A6 362 aa6.34□□□□□ -1.39
CFHR3-201ENST00000367425 WDR26Q9H7D7 661 aa6.34□□□□□ -1.39
CFHR3-201ENST00000367425 IFT22Q9H7X7 185 aa6.34□□□□□ -1.39
CFHR3-201ENST00000367425 TNFRSF12AQ9NP84 129 aa6.34□□□□□ -1.39
CFHR3-201ENST00000367425 SLC12A8A0AV02 714 aa6.33□□□□□ -1.4
CFHR3-201ENST00000367425 PTPDC1A2A3K4 754 aa6.33□□□□□ -1.4
CFHR3-201ENST00000367425 ZNF891A8MT65 544 aaPredicted RBP6.33□□□□□ -1.4
CFHR3-201ENST00000367425 ZNF561-AS1K7EIQ3 104 aa6.33□□□□□ -1.4
CFHR3-201ENST00000367425 NKRFO15226 690 aaKnown RBP eCLIP6.33□□□□□ -1.4
CFHR3-201ENST00000367425 SRGAP3O43295 1099 aa6.33□□□□□ -1.4
CFHR3-201ENST00000367425 CYBBP04839 570 aa6.33□□□□□ -1.4
CFHR3-201ENST00000367425 JAM2P57087 298 aa6.33□□□□□ -1.4
CFHR3-201ENST00000367425 IL2P60568 153 aa6.33□□□□□ -1.4
CFHR3-201ENST00000367425 OCRLQ01968 901 aa6.33□□□□□ -1.4
CFHR3-201ENST00000367425 DSG1Q02413 1049 aa6.33□□□□□ -1.4
CFHR3-201ENST00000367425 SKOR2Q2VWA4 1001 aaPredicted RBP6.33□□□□□ -1.4
CFHR3-201ENST00000367425 EMC4Q5J8M3 183 aa6.33□□□□□ -1.4
CFHR3-201ENST00000367425 CYP4F22Q6NT55 531 aa6.33□□□□□ -1.4
CFHR3-201ENST00000367425 DSEQ9UL01 958 aa6.33□□□□□ -1.4
CFHR3-201ENST00000367425 YBX2Q9Y2T7 364 aaKnown RBP6.33□□□□□ -1.4
CFHR3-201ENST00000367425 HGSO14964 777 aaPredicted RBP6.32□□□□□ -1.4
CFHR3-201ENST00000367425 ZEB2O60315 1214 aa6.32□□□□□ -1.4
CFHR3-201ENST00000367425 MPOP05164 745 aa6.32□□□□□ -1.4
CFHR3-201ENST00000367425 DBHP09172 617 aa6.32□□□□□ -1.4
CFHR3-201ENST00000367425 PAQR3Q6TCH7 311 aa6.32□□□□□ -1.4
CFHR3-201ENST00000367425 DBX2Q6ZNG2 339 aa6.32□□□□□ -1.4
CFHR3-201ENST00000367425 PTRH1Q86Y79 214 aaKnown RBP6.32□□□□□ -1.4
CFHR3-201ENST00000367425 RPUSD2Q8IZ73 545 aaKnown RBP6.32□□□□□ -1.4
CFHR3-201ENST00000367425 NLGN4XQ8N0W4 816 aa6.32□□□□□ -1.4
CFHR3-201ENST00000367425 UHMK1Q8TAS1 419 aaKnown RBP6.32□□□□□ -1.4
CFHR3-201ENST00000367425 PEX11GQ96HA9 241 aa6.32□□□□□ -1.4
CFHR3-201ENST00000367425 BOCQ9BWV1 1114 aa6.32□□□□□ -1.4
CFHR3-201ENST00000367425 SLC6A17Q9H1V8 727 aa6.32□□□□□ -1.4
CFHR3-201ENST00000367425 SMOC1Q9H4F8 434 aa6.32□□□□□ -1.4
CFHR3-201ENST00000367425 SMURF1Q9HCE7 757 aa6.32□□□□□ -1.4
CFHR3-201ENST00000367425 HOMER2Q9NSB8 354 aa6.32□□□□□ -1.4
CFHR3-201ENST00000367425 DBR1Q9UK59 544 aaKnown RBP6.32□□□□□ -1.4
CFHR3-201ENST00000367425 APOBEC2Q9Y235 224 aaKnown RBP6.32□□□□□ -1.4
CFHR3-201ENST00000367425 ALG1L2C9J202 215 aa6.32□□□□□ -1.4
CFHR3-201ENST00000367425 BIN1O00499 593 aa6.32□□□□□ -1.4
CFHR3-201ENST00000367425 KRT37O76014 449 aa6.32□□□□□ -1.4
CFHR3-201ENST00000367425 EYA4O95677 639 aa6.32□□□□□ -1.4
CFHR3-201ENST00000367425 AMY2AP04746 511 aa6.32□□□□□ -1.4
CFHR3-201ENST00000367425 BPIP17213 487 aa6.32□□□□□ -1.4
CFHR3-201ENST00000367425 AMY2BP19961 511 aa6.32□□□□□ -1.4
CFHR3-201ENST00000367425 PMLP29590 882 aa6.32□□□□□ -1.4
CFHR3-201ENST00000367425 CDKN1CP49918 316 aaPredicted RBP6.32□□□□□ -1.4
CFHR3-201ENST00000367425 ERVFRD-1P60508 538 aa6.32□□□□□ -1.4
CFHR3-201ENST00000367425 NR1I3Q14994 352 aa6.32□□□□□ -1.4
CFHR3-201ENST00000367425 HHIPL2Q6UWX4 724 aa6.32□□□□□ -1.4
CFHR3-201ENST00000367425 OTOP1Q7RTM1 612 aa6.32□□□□□ -1.4
CFHR3-201ENST00000367425 ATG4DQ86TL0 474 aaPredicted RBP6.32□□□□□ -1.4
CFHR3-201ENST00000367425 SMC1BQ8NDV3 1235 aa6.32□□□□□ -1.4
CFHR3-201ENST00000367425 WDR66Q8TBY9 1149 aa6.32□□□□□ -1.4
CFHR3-201ENST00000367425 PHOSPHO1Q8TCT1 267 aa6.32□□□□□ -1.4
CFHR3-201ENST00000367425 GPR101Q96P66 508 aaPredicted RBP6.32□□□□□ -1.4
CFHR3-201ENST00000367425 THG1LQ9NWX6 298 aaKnown RBP6.32□□□□□ -1.4
CFHR3-201ENST00000367425 PCDHB4Q9Y5E5 795 aa6.32□□□□□ -1.4
CFHR3-201ENST00000367425 F8W031 263 aaPredicted RBP6.31□□□□□ -1.4
CFHR3-201ENST00000367425 H7C1D1 291 aa6.31□□□□□ -1.4
CFHR3-201ENST00000367425 HIP1RO75146 1068 aa6.31□□□□□ -1.4
CFHR3-201ENST00000367425 FKBP9O95302 570 aa6.31□□□□□ -1.4
CFHR3-201ENST00000367425 LSSP48449 732 aa6.31□□□□□ -1.4
CFHR3-201ENST00000367425 KPNA1P52294 538 aaPredicted RBP6.31□□□□□ -1.4
CFHR3-201ENST00000367425 TMEM62Q0P6H9 643 aa6.31□□□□□ -1.4
CFHR3-201ENST00000367425 STAT4Q14765 748 aa6.31□□□□□ -1.4
CFHR3-201ENST00000367425 FIGNQ5HY92 759 aa6.31□□□□□ -1.4
CFHR3-201ENST00000367425 ADGRF1Q5T601 910 aa6.31□□□□□ -1.4
CFHR3-201ENST00000367425 FYB2Q5VWT5 728 aa6.31□□□□□ -1.4
CFHR3-201ENST00000367425 RNF219Q5W0B1 726 aaPredicted RBP6.31□□□□□ -1.4
CFHR3-201ENST00000367425 FKBP9P1Q75LS8 142 aa6.31□□□□□ -1.4
CFHR3-201ENST00000367425 C11orf74Q86VG3 221 aa6.31□□□□□ -1.4
CFHR3-201ENST00000367425 INTS4Q96HW7 963 aaKnown RBP6.31□□□□□ -1.4
CFHR3-201ENST00000367425 TYW1Q9NV66 732 aaKnown RBP6.31□□□□□ -1.4
CFHR3-201ENST00000367425 DDX56Q9NY93 547 aaKnown RBP6.31□□□□□ -1.4
CFHR3-201ENST00000367425 MYOTQ9UBF9 498 aa6.31□□□□□ -1.4
CFHR3-201ENST00000367425 RAPGEFL1Q9UHV5 662 aa6.31□□□□□ -1.4
CFHR3-201ENST00000367425 SRPK3Q9UPE1 567 aa6.31□□□□□ -1.4
CFHR3-201ENST00000367425 ZNF652Q9Y2D9 606 aa6.31□□□□□ -1.4
CFHR3-201ENST00000367425 ATP23Q9Y6H3 246 aa6.31□□□□□ -1.4
CFHR3-201ENST00000367425 TCRBV5S4A2TA0A5A2 114 aa6.3□□□□□ -1.4
CFHR3-201ENST00000367425 ZC3H12DA2A288 527 aaKnown RBP6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms